RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 NARFQ9UHQ1 456 aa27.83■■■□□ 2.05
TMEM50B-204ENST00000442441 HTRA3P83110 453 aa27.82■■■□□ 2.04
TMEM50B-204ENST00000442441 SLC39A6Q13433 755 aa27.82■■■□□ 2.04
TMEM50B-204ENST00000442441 KLRG1Q96E93 195 aa27.82■■■□□ 2.04
TMEM50B-204ENST00000442441 MRC1P22897 1456 aa27.82■■■□□ 2.04
TMEM50B-204ENST00000442441 RNMTO43148 476 aaKnown RBP27.81■■■□□ 2.04
TMEM50B-204ENST00000442441 NFIXQ14938 502 aa27.81■■■□□ 2.04
TMEM50B-204ENST00000442441 TNRC6CQ9HCJ0 1690 aaKnown RBP27.81■■■□□ 2.04
TMEM50B-204ENST00000442441 COL15A1P39059 1388 aa27.8■■■□□ 2.04
TMEM50B-204ENST00000442441 AFDNP55196 1824 aaKnown RBP27.79■■■□□ 2.04
TMEM50B-204ENST00000442441 ZC3H4Q9UPT8 1303 aaKnown RBP27.79■■■□□ 2.04
TMEM50B-204ENST00000442441 ZBTB1Q9Y2K1 713 aa27.79■■■□□ 2.04
TMEM50B-204ENST00000442441 RASSF7Q02833 373 aa27.78■■■□□ 2.04
TMEM50B-204ENST00000442441 AMER1Q5JTC6 1135 aaPredicted RBP27.78■■■□□ 2.04
TMEM50B-204ENST00000442441 JMYQ8N9B5 988 aa27.78■■■□□ 2.04
TMEM50B-204ENST00000442441 NRXN2Q9P2S2 1712 aa27.78■■■□□ 2.04
TMEM50B-204ENST00000442441 HMOX1P09601 288 aa27.77■■■□□ 2.04
TMEM50B-204ENST00000442441 SERPINB2P05120 415 aa27.76■■■□□ 2.03
TMEM50B-204ENST00000442441 VSIG10Q8N0Z9 540 aa27.76■■■□□ 2.03
TMEM50B-204ENST00000442441 SMC1BQ8NDV3 1235 aa27.76■■■□□ 2.03
TMEM50B-204ENST00000442441 BCL2L12Q9HB09 334 aa27.76■■■□□ 2.03
TMEM50B-204ENST00000442441 LMNB1P20700 586 aa27.75■■■□□ 2.03
TMEM50B-204ENST00000442441 VIRMAQ69YN4 1812 aaKnown RBP27.75■■■□□ 2.03
TMEM50B-204ENST00000442441 MTHFSDQ2M296 383 aaKnown RBP27.74■■■□□ 2.03
TMEM50B-204ENST00000442441 TTLL6Q8N841 843 aa27.74■■■□□ 2.03
TMEM50B-204ENST00000442441 DLEC1Q9Y238 1755 aa27.73■■■□□ 2.03
TMEM50B-204ENST00000442441 PRELPP51888 382 aa27.72■■■□□ 2.03
TMEM50B-204ENST00000442441 C2CD5Q86YS7 1000 aa27.72■■■□□ 2.03
TMEM50B-204ENST00000442441 GLTPD2A6NH11 291 aa27.71■■■□□ 2.03
TMEM50B-204ENST00000442441 CANXP27824 592 aaKnown RBP27.71■■■□□ 2.03
TMEM50B-204ENST00000442441 H0YIN7 160 aa27.7■■■□□ 2.02
TMEM50B-204ENST00000442441 PCNTO95613 3336 aa27.7■■■□□ 2.02
TMEM50B-204ENST00000442441 UBR2Q8IWV8 1755 aa27.69■■■□□ 2.02
TMEM50B-204ENST00000442441 VEGFAP15692 232 aaPredicted RBP27.69■■■□□ 2.02
TMEM50B-204ENST00000442441 DIAPH1O60610 1272 aaKnown RBP27.68■■■□□ 2.02
TMEM50B-204ENST00000442441 STARD3NLO95772 234 aa27.68■■■□□ 2.02
TMEM50B-204ENST00000442441 CARMIL3Q8ND23 1372 aa27.68■■■□□ 2.02
TMEM50B-204ENST00000442441 EIF5P55010 431 aaKnown RBP27.67■■■□□ 2.02
TMEM50B-204ENST00000442441 COL13A1Q5TAT6 717 aaPredicted RBP27.67■■■□□ 2.02
TMEM50B-204ENST00000442441 BICDL1Q6ZP65 573 aa27.67■■■□□ 2.02
TMEM50B-204ENST00000442441 TTC5Q8N0Z6 440 aa27.67■■■□□ 2.02
TMEM50B-204ENST00000442441 A0A087WZG4 1122 aa27.66■■■□□ 2.02
TMEM50B-204ENST00000442441 NFKBIEO00221 500 aa27.65■■■□□ 2.02
TMEM50B-204ENST00000442441 TIAM2Q8IVF5 1701 aa27.64■■■□□ 2.02
TMEM50B-204ENST00000442441 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.02
TMEM50B-204ENST00000442441 KIF7Q2M1P5 1343 aa27.64■■■□□ 2.01
TMEM50B-204ENST00000442441 TBC1D9BQ66K14 1250 aa27.62■■■□□ 2.01
TMEM50B-204ENST00000442441 ZNF496Q96IT1 587 aaPredicted RBP27.62■■■□□ 2.01
TMEM50B-204ENST00000442441 PDZRN3Q9UPQ7 1066 aa27.62■■■□□ 2.01
TMEM50B-204ENST00000442441 PER1O15534 1290 aaPredicted RBP27.61■■■□□ 2.01
TMEM50B-204ENST00000442441 BRIP1Q9BX63 1249 aa27.61■■■□□ 2.01
TMEM50B-204ENST00000442441 TEX13AQ9BXU3 409 aaPredicted RBP27.61■■■□□ 2.01
TMEM50B-204ENST00000442441 PDE6BP35913 854 aa27.6■■■□□ 2.01
TMEM50B-204ENST00000442441 TEFQ10587 303 aa27.6■■■□□ 2.01
TMEM50B-204ENST00000442441 CC2D1BQ5T0F9 858 aaKnown RBP27.6■■■□□ 2.01
TMEM50B-204ENST00000442441 ZNF790Q6PG37 636 aa27.6■■■□□ 2.01
TMEM50B-204ENST00000442441 ZNF622Q969S3 477 aaKnown RBP eCLIP27.6■■■□□ 2.013e-7■□□□□ 8.4
TMEM50B-204ENST00000442441 HEG1Q9ULI3 1381 aa27.6■■■□□ 2.01
TMEM50B-204ENST00000442441 ANKRD31Q8N7Z5 1873 aa27.59■■■□□ 2.01
TMEM50B-204ENST00000442441 DPY19L2Q6NUT2 758 aa27.59■■■□□ 2.01
TMEM50B-204ENST00000442441 POTECB2RU33 542 aa27.58■■■□□ 2.01
TMEM50B-204ENST00000442441 PRR5LQ6MZQ0 368 aa27.58■■■□□ 2.01
TMEM50B-204ENST00000442441 IL17REQ8NFR9 667 aa27.58■■■□□ 2.01
TMEM50B-204ENST00000442441 TBC1D2BQ9UPU7 963 aa27.58■■■□□ 2.01
TMEM50B-204ENST00000442441 SCN7AQ01118 1682 aa27.58■■■□□ 2.01
TMEM50B-204ENST00000442441 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
TMEM50B-204ENST00000442441 C21orf2O43822 256 aa27.57■■■□□ 2
TMEM50B-204ENST00000442441 IL6STP40189 918 aaPredicted RBP27.57■■■□□ 2
TMEM50B-204ENST00000442441 GAS2L2Q8NHY3 880 aa27.57■■■□□ 2
TMEM50B-204ENST00000442441 ZNF330Q9Y3S2 320 aaPredicted RBP27.57■■■□□ 2
TMEM50B-204ENST00000442441 CCER1Q8TC90 406 aaPredicted RBP27.56■■■□□ 2
TMEM50B-204ENST00000442441 ZNF219Q9P2Y4 722 aaPredicted RBP27.56■■■□□ 2
TMEM50B-204ENST00000442441 ERFEQ4G0M1 354 aa27.55■■■□□ 2
TMEM50B-204ENST00000442441 TNS4Q8IZW8 715 aa27.55■■■□□ 2
TMEM50B-204ENST00000442441 CCDC24Q8N4L8 307 aa27.55■■■□□ 2
TMEM50B-204ENST00000442441 COL3A1P02461 1466 aaPredicted RBP27.55■■■□□ 2
TMEM50B-204ENST00000442441 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
TMEM50B-204ENST00000442441 COL11A2P13942 1736 aaPredicted RBP27.54■■■□□ 2
TMEM50B-204ENST00000442441 DICER1Q9UPY3 1922 aaKnown RBP27.53■■■□□ 2
TMEM50B-204ENST00000442441 FER1L6Q2WGJ9 1857 aa27.53■■■□□ 2
TMEM50B-204ENST00000442441 SIPA1L3O60292 1781 aaPredicted RBP27.53■■■□□ 2
TMEM50B-204ENST00000442441 NPM2Q86SE8 214 aaKnown RBP27.53■■■□□ 2
TMEM50B-204ENST00000442441 FMNL2Q96PY5 1086 aa27.53■■■□□ 2
TMEM50B-204ENST00000442441 LTBP3Q9NS15 1303 aa27.52■■■□□ 2
TMEM50B-204ENST00000442441 SETDB2Q96T68 719 aa27.52■■■□□ 2
TMEM50B-204ENST00000442441 CAMTA2O94983 1202 aa27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 A1BGP04217 495 aa27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 HSPA1AP0DMV8 641 aaKnown RBP27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 HSPA1BP0DMV9 641 aaKnown RBP27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 CNBD1Q8NA66 436 aa27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 TAOK3Q9H2K8 898 aa27.51■■□□□ 1.99
TMEM50B-204ENST00000442441 CAPN15O75808 1086 aa27.5■■□□□ 1.99
TMEM50B-204ENST00000442441 CNKSR1Q969H4 720 aa27.5■■□□□ 1.99
TMEM50B-204ENST00000442441 NPHP1O15259 732 aa27.49■■□□□ 1.99
TMEM50B-204ENST00000442441 STYK1Q6J9G0 422 aa27.49■■□□□ 1.99
TMEM50B-204ENST00000442441 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
TMEM50B-204ENST00000442441 NPC1L1Q9UHC9 1359 aa27.48■■□□□ 1.99
TMEM50B-204ENST00000442441 ST5P78524 1137 aa27.48■■□□□ 1.99
TMEM50B-204ENST00000442441 SRGNP10124 158 aa27.47■■□□□ 1.99
TMEM50B-204ENST00000442441 SLX4Q8IY92 1834 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms