RNA–Protein interactions for RNA: ENST00000441102.6

ZHX3-208, Transcript of zinc fingers and homeoboxes 3, human

TSL 2

Gene ZHX3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZHX3-208	ENST00000441102	USPL1	Q5W0Q7	1092 aa		28	■■■□□ 2.07
ZHX3-208	ENST00000441102	N4BP2	Q86UW6	1770 aa	Predicted RBP	28	■■■□□ 2.07
ZHX3-208	ENST00000441102	COL15A1	P39059	1388 aa		27.99	■■■□□ 2.07
ZHX3-208	ENST00000441102	PARP3	Q9Y6F1	533 aa		27.99	■■■□□ 2.07
ZHX3-208	ENST00000441102	BTBD11	A6QL63	1104 aa		27.98	■■■□□ 2.07
ZHX3-208	ENST00000441102	CANX	P27824	592 aa	Known RBP	27.98	■■■□□ 2.07
ZHX3-208	ENST00000441102	PLEKHF1	Q96S99	279 aa		27.97	■■■□□ 2.07
ZHX3-208	ENST00000441102		A0A0G2JLW4	131 aa		27.96	■■■□□ 2.07
ZHX3-208	ENST00000441102	RTF1	Q92541	710 aa	Known RBP	27.96	■■■□□ 2.07
ZHX3-208	ENST00000441102	BCL2L12	Q9HB09	334 aa		27.96	■■■□□ 2.07
ZHX3-208	ENST00000441102	ZPR1	O75312	459 aa		27.95	■■■□□ 2.06
ZHX3-208	ENST00000441102	STARD3NL	O95772	234 aa		27.95	■■■□□ 2.06
ZHX3-208	ENST00000441102	TM4SF1	P30408	202 aa		27.95	■■■□□ 2.06
ZHX3-208	ENST00000441102	FMNL2	Q96PY5	1086 aa		27.95	■■■□□ 2.06
ZHX3-208	ENST00000441102	NARF	Q9UHQ1	456 aa		27.95	■■■□□ 2.06
ZHX3-208	ENST00000441102	DLG5	Q8TDM6	1919 aa		27.94	■■■□□ 2.06
ZHX3-208	ENST00000441102	RALBP1	Q15311	655 aa		27.94	■■■□□ 2.06
ZHX3-208	ENST00000441102	PRAMEF22	A3QJZ6	481 aa		27.93	■■■□□ 2.06
ZHX3-208	ENST00000441102	POLRMT	O00411	1230 aa	Known RBP	27.93	■■■□□ 2.06
ZHX3-208	ENST00000441102	EIF5	P55010	431 aa	Known RBP	27.93	■■■□□ 2.06
ZHX3-208	ENST00000441102	TGFB2	P61812	414 aa		27.93	■■■□□ 2.06
ZHX3-208	ENST00000441102	HTATSF1	O43719	755 aa	Known RBP	27.92	■■■□□ 2.06
ZHX3-208	ENST00000441102	DPEP1	P16444	411 aa		27.92	■■■□□ 2.06
ZHX3-208	ENST00000441102	A1BG	P04217	495 aa		27.91	■■■□□ 2.06
ZHX3-208	ENST00000441102	NFIX	Q14938	502 aa		27.91	■■■□□ 2.06
ZHX3-208	ENST00000441102	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.9	■■■□□ 2.06
ZHX3-208	ENST00000441102	KCNA3	P22001	575 aa		27.89	■■■□□ 2.06
ZHX3-208	ENST00000441102	MIS18A	Q9NYP9	233 aa		27.89	■■■□□ 2.06
ZHX3-208	ENST00000441102	USP16	Q9Y5T5	823 aa		27.89	■■■□□ 2.06
ZHX3-208	ENST00000441102	BRCA1	P38398	1863 aa	Known RBP	27.88	■■■□□ 2.05
ZHX3-208	ENST00000441102	AFDN	P55196	1824 aa	Known RBP	27.88	■■■□□ 2.05
ZHX3-208	ENST00000441102	PIP4K2A	P48426	406 aa	Predicted RBP	27.87	■■■□□ 2.05
ZHX3-208	ENST00000441102	NFE2L2	Q16236	605 aa		27.87	■■■□□ 2.05
ZHX3-208	ENST00000441102	THUMPD2	Q9BTF0	503 aa	Known RBP	27.87	■■■□□ 2.05
ZHX3-208	ENST00000441102	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.87	■■■□□ 2.05
ZHX3-208	ENST00000441102	TAF7	Q15545	349 aa	Predicted RBP	27.86	■■■□□ 2.05
ZHX3-208	ENST00000441102	TBC1D2B	Q9UPU7	963 aa		27.86	■■■□□ 2.05
ZHX3-208	ENST00000441102	BCS1L	Q9Y276	419 aa		27.86	■■■□□ 2.05
ZHX3-208	ENST00000441102	NRXN2	Q9P2S2	1712 aa		27.85	■■■□□ 2.05
ZHX3-208	ENST00000441102	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.85	■■■□□ 2.05
ZHX3-208	ENST00000441102	SCN7A	Q01118	1682 aa		27.84	■■■□□ 2.05
ZHX3-208	ENST00000441102	NEFM	P07197	916 aa		27.84	■■■□□ 2.05
ZHX3-208	ENST00000441102	IL6ST	P40189	918 aa	Predicted RBP	27.84	■■■□□ 2.05
ZHX3-208	ENST00000441102		A0A087WZG4	1122 aa		27.83	■■■□□ 2.05
ZHX3-208	ENST00000441102	CHRNA5	P30532	468 aa		27.83	■■■□□ 2.05
ZHX3-208	ENST00000441102	BICDL1	Q6ZP65	573 aa		27.83	■■■□□ 2.05
ZHX3-208	ENST00000441102	SNRPA1	P09661	255 aa	Known RBP	27.82	■■■□□ 2.04
ZHX3-208	ENST00000441102	SERPINB2	P05120	415 aa		27.81	■■■□□ 2.04
ZHX3-208	ENST00000441102	TBC1D9B	Q66K14	1250 aa		27.81	■■■□□ 2.04
ZHX3-208	ENST00000441102	MAPK8IP3	Q9UPT6	1336 aa		27.81	■■■□□ 2.04
ZHX3-208	ENST00000441102	ADCY9	O60503	1353 aa		27.81	■■■□□ 2.04
ZHX3-208	ENST00000441102	KDM3B	Q7LBC6	1761 aa		27.81	■■■□□ 2.04
ZHX3-208	ENST00000441102	ATP10D	Q9P241	1426 aa		27.8	■■■□□ 2.04
ZHX3-208	ENST00000441102	CARMIL3	Q8ND23	1372 aa		27.79	■■■□□ 2.04
ZHX3-208	ENST00000441102	CAMTA2	O94983	1202 aa		27.79	■■■□□ 2.04
ZHX3-208	ENST00000441102	NBPF26	B4DH59	902 aa		27.78	■■■□□ 2.04
ZHX3-208	ENST00000441102	NBPF10	Q6P3W6	841 aa	Known RBP	27.78	■■■□□ 2.04
ZHX3-208	ENST00000441102	NBPF15	Q8N660	670 aa		27.78	■■■□□ 2.04
ZHX3-208	ENST00000441102	PNN	Q9H307	717 aa	Known RBP	27.78	■■■□□ 2.04
ZHX3-208	ENST00000441102	PIM2	Q9P1W9	311 aa		27.77	■■■□□ 2.04
ZHX3-208	ENST00000441102	BCOR	Q6W2J9	1755 aa		27.77	■■■□□ 2.04
ZHX3-208	ENST00000441102	DZIP3	Q86Y13	1208 aa	Known RBP	27.76	■■■□□ 2.03
ZHX3-208	ENST00000441102	ARFGEF1	Q9Y6D6	1849 aa		27.76	■■■□□ 2.03
ZHX3-208	ENST00000441102	CCDC146	Q8IYE0	955 aa		27.75	■■■□□ 2.03
ZHX3-208	ENST00000441102	LAMB4	A4D0S4	1761 aa		27.74	■■■□□ 2.03
ZHX3-208	ENST00000441102	ARHGAP27	Q6ZUM4	889 aa		27.74	■■■□□ 2.03
ZHX3-208	ENST00000441102	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.74	■■■□□ 2.03
ZHX3-208	ENST00000441102	TMPO	P42166	694 aa	Known RBP	27.73	■■■□□ 2.03
ZHX3-208	ENST00000441102	RIPK4	P57078	832 aa		27.73	■■■□□ 2.03
ZHX3-208	ENST00000441102	EIF4A1	P60842	406 aa	Known RBP	27.73	■■■□□ 2.03
ZHX3-208	ENST00000441102	CCDC24	Q8N4L8	307 aa		27.73	■■■□□ 2.03
ZHX3-208	ENST00000441102	RRP7A	Q9Y3A4	280 aa	Known RBP	27.73	■■■□□ 2.03
ZHX3-208	ENST00000441102	ANKRD31	Q8N7Z5	1873 aa		27.72	■■■□□ 2.03
ZHX3-208	ENST00000441102	DALRD3	Q5D0E6	543 aa	Known RBP	27.72	■■■□□ 2.03
ZHX3-208	ENST00000441102	PNISR	Q8TF01	805 aa	Known RBP	27.72	■■■□□ 2.03
ZHX3-208	ENST00000441102	GIGYF1	O75420	1035 aa	Predicted RBP	27.71	■■■□□ 2.03
ZHX3-208	ENST00000441102	NPM2	Q86SE8	214 aa	Known RBP	27.71	■■■□□ 2.03
ZHX3-208	ENST00000441102	ZNF526	Q8TF50	670 aa	Predicted RBP	27.7	■■■□□ 2.02
ZHX3-208	ENST00000441102	DLEC1	Q9Y238	1755 aa		27.7	■■■□□ 2.02
ZHX3-208	ENST00000441102	PRR5L	Q6MZQ0	368 aa		27.69	■■■□□ 2.02
ZHX3-208	ENST00000441102	C1QTNF8	P60827	252 aa		27.68	■■■□□ 2.02
ZHX3-208	ENST00000441102	ADAMTS8	Q9UP79	889 aa		27.68	■■■□□ 2.02
ZHX3-208	ENST00000441102	C2CD5	Q86YS7	1000 aa		27.67	■■■□□ 2.02
ZHX3-208	ENST00000441102	SETDB2	Q96T68	719 aa		27.67	■■■□□ 2.02
ZHX3-208	ENST00000441102	WDR43	Q15061	677 aa	Known RBP eCLIP	27.66	■■■□□ 2.02
ZHX3-208	ENST00000441102	NEUROD2	Q15784	382 aa		27.66	■■■□□ 2.02
ZHX3-208	ENST00000441102	COL11A2	P13942	1736 aa	Predicted RBP	27.65	■■■□□ 2.02
ZHX3-208	ENST00000441102	TSPYL4	Q9UJ04	414 aa		27.65	■■■□□ 2.02
ZHX3-208	ENST00000441102	NGEF	Q8N5V2	710 aa		27.64	■■■□□ 2.02
ZHX3-208	ENST00000441102	RUNDC1	Q96C34	613 aa		27.64	■■■□□ 2.02
ZHX3-208	ENST00000441102	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.64	■■■□□ 2.02
ZHX3-208	ENST00000441102	HLF	Q16534	295 aa		27.63	■■■□□ 2.01
ZHX3-208	ENST00000441102	CLEC4G	Q6UXB4	293 aa		27.63	■■■□□ 2.01
ZHX3-208	ENST00000441102	BRIP1	Q9BX63	1249 aa		27.63	■■■□□ 2.01
ZHX3-208	ENST00000441102	TRIM35	Q9UPQ4	493 aa		27.63	■■■□□ 2.01
ZHX3-208	ENST00000441102		H0YIN7	160 aa		27.62	■■■□□ 2.01
ZHX3-208	ENST00000441102	C9orf131	Q5VYM1	1079 aa		27.62	■■■□□ 2.01
ZHX3-208	ENST00000441102	CNBD1	Q8NA66	436 aa		27.62	■■■□□ 2.01
ZHX3-208	ENST00000441102	ZEB1	P37275	1124 aa	Predicted RBP	27.61	■■■□□ 2.01
ZHX3-208	ENST00000441102	MYL6B	P14649	208 aa		27.6	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms