RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 EPB41L2O43491 1005 aaKnown RBP21.41■■□□□ 1.02
SATB2-204ENST00000440919 HDGFL1Q5TGJ6 251 aa21.41■■□□□ 1.02
SATB2-204ENST00000440919 PDLIM2Q96JY6 352 aa21.41■■□□□ 1.02
SATB2-204ENST00000440919 IL25Q9H293 177 aa21.41■■□□□ 1.02
SATB2-204ENST00000440919 LRSAM1Q6UWE0 723 aa21.41■■□□□ 1.02
SATB2-204ENST00000440919 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
SATB2-204ENST00000440919 IL1RAPL2Q9NP60 686 aa21.41■■□□□ 1.02
SATB2-204ENST00000440919 MBD3O95983 291 aa21.4■■□□□ 1.02
SATB2-204ENST00000440919 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
SATB2-204ENST00000440919 POLA2Q14181 598 aa21.4■■□□□ 1.02
SATB2-204ENST00000440919 RAB11FIP3O75154 756 aa21.39■■□□□ 1.01
SATB2-204ENST00000440919 HS1BP3Q53T59 392 aa21.39■■□□□ 1.01
SATB2-204ENST00000440919 NOL8Q76FK4 1167 aaKnown RBP21.39■■□□□ 1.01
SATB2-204ENST00000440919 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.01
SATB2-204ENST00000440919 UPF3BQ9BZI7 483 aaKnown RBP21.39■■□□□ 1.01
SATB2-204ENST00000440919 CEMIPQ8WUJ3 1361 aa21.39■■□□□ 1.01
SATB2-204ENST00000440919 MED1Q15648 1581 aaPredicted RBP21.39■■□□□ 1.01
SATB2-204ENST00000440919 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
SATB2-204ENST00000440919 PROSER2Q86WR7 435 aaPredicted RBP21.38■■□□□ 1.01
SATB2-204ENST00000440919 LTN1O94822 1766 aa21.38■■□□□ 1.01
SATB2-204ENST00000440919 SYCE3A1L190 88 aa21.38■■□□□ 1.01
SATB2-204ENST00000440919 HSPA4P34932 840 aa21.38■■□□□ 1.01
SATB2-204ENST00000440919 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
SATB2-204ENST00000440919 PSME1Q06323 249 aa21.37■■□□□ 1.01
SATB2-204ENST00000440919 PI4K2BQ8TCG2 481 aa21.37■■□□□ 1.01
SATB2-204ENST00000440919 SURF6O75683 361 aaKnown RBP21.37■■□□□ 1.01
SATB2-204ENST00000440919 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
SATB2-204ENST00000440919 RHPN1Q8TCX5 695 aa21.36■■□□□ 1.01
SATB2-204ENST00000440919 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
SATB2-204ENST00000440919 MSNP26038 577 aaKnown RBP21.36■■□□□ 1.01
SATB2-204ENST00000440919 CRYBG1Q9Y4K1 1723 aa21.35■■□□□ 1.01
SATB2-204ENST00000440919 UBE2Q2Q8WVN8 375 aa21.34■■□□□ 1.01
SATB2-204ENST00000440919 RAD50Q92878 1312 aa21.34■■□□□ 1.01
SATB2-204ENST00000440919 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
SATB2-204ENST00000440919 KIF1BPQ96EK5 621 aa21.34■■□□□ 1.01
SATB2-204ENST00000440919 SGSM2O43147 1006 aa21.33■■□□□ 1.01
SATB2-204ENST00000440919 SRGAP3O43295 1099 aa21.33■■□□□ 1.01
SATB2-204ENST00000440919 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
SATB2-204ENST00000440919 MAP4K4O95819 1239 aaPredicted RBP21.33■■□□□ 1.01
SATB2-204ENST00000440919 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1.01
SATB2-204ENST00000440919 NOL7Q9UMY1 257 aaKnown RBP21.33■■□□□ 1.01
SATB2-204ENST00000440919 HOXB7P09629 217 aa21.33■■□□□ 1
SATB2-204ENST00000440919 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
SATB2-204ENST00000440919 BEND3Q5T5X7 828 aa21.32■■□□□ 1
SATB2-204ENST00000440919 C19orf44Q9H6X5 657 aa21.32■■□□□ 1
SATB2-204ENST00000440919 OFD1O75665 1012 aa21.31■■□□□ 1
SATB2-204ENST00000440919 CHPF2Q9P2E5 772 aa21.31■■□□□ 1
SATB2-204ENST00000440919 DNAAF4Q8WXU2 420 aa21.31■■□□□ 1
SATB2-204ENST00000440919 ORAI2Q96SN7 254 aa21.31■■□□□ 1
SATB2-204ENST00000440919 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
SATB2-204ENST00000440919 NFAT5O94916 1531 aa21.31■■□□□ 1
SATB2-204ENST00000440919 LSG1Q9H089 658 aaKnown RBP21.3■■□□□ 1
SATB2-204ENST00000440919 LGR6Q9HBX8 967 aa21.3■■□□□ 1
SATB2-204ENST00000440919 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.3■■□□□ 1
SATB2-204ENST00000440919 SNX14Q9Y5W7 946 aa21.3■■□□□ 1
SATB2-204ENST00000440919 RPAP1Q9BWH6 1393 aaPredicted RBP21.3■■□□□ 1
SATB2-204ENST00000440919 TPM2P07951 284 aa21.3■■□□□ 1
SATB2-204ENST00000440919 CNTROBQ8N137 903 aa21.3■■□□□ 1
SATB2-204ENST00000440919 IP6K1Q92551 441 aa21.3■■□□□ 1
SATB2-204ENST00000440919 TCHHQ07283 1943 aa21.3■■□□□ 1
SATB2-204ENST00000440919 PI4KAP2A4QPH2 592 aa21.29■■□□□ 1
SATB2-204ENST00000440919 PI4KAP1Q8N8J0 262 aa21.29■■□□□ 1
SATB2-204ENST00000440919 TTC14Q96N46 770 aa21.29■■□□□ 1
SATB2-204ENST00000440919 LMO7Q8WWI1 1683 aa21.29■■□□□ 1
SATB2-204ENST00000440919 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
SATB2-204ENST00000440919 NBPF6Q5VWK0 638 aa21.29■■□□□ 1
SATB2-204ENST00000440919 KIAA1211Q6ZU35 1233 aa21.29■■□□□ 1
SATB2-204ENST00000440919 NBPF4Q96M43 638 aa21.29■■□□□ 1
SATB2-204ENST00000440919 ZNF500O60304 480 aaPredicted RBP21.28■■□□□ 1
SATB2-204ENST00000440919 KCNH5Q8NCM2 988 aa21.28■■□□□ 1
SATB2-204ENST00000440919 SYAP1Q96A49 352 aaPredicted RBP21.28■■□□□ 1
SATB2-204ENST00000440919 ADCY9O60503 1353 aa21.28■■□□□ 1
SATB2-204ENST00000440919 HSP90AB4PQ58FF6 505 aa21.27■■□□□ 1
SATB2-204ENST00000440919 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.27■■□□□ 1
SATB2-204ENST00000440919 GADD45BO75293 160 aaPredicted RBP21.27■■□□□ 1
SATB2-204ENST00000440919 CHMP4AQ9BY43 222 aa21.27■■□□□ 1
SATB2-204ENST00000440919 GDPD2Q9HCC8 539 aa21.27■■□□□ 1
SATB2-204ENST00000440919 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 KCNQ3O43525 872 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 RRP9O43818 475 aaKnown RBP21.26■□□□□ 0.99
SATB2-204ENST00000440919 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
SATB2-204ENST00000440919 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
SATB2-204ENST00000440919 USP48Q86UV5 1035 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 RASEFQ8IZ41 740 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 TSPY26PQ9H489 355 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 TMEM87AQ8NBN3 555 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 RNF214Q8ND24 703 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 ZKSCAN5Q9Y2L8 839 aa21.26■□□□□ 0.99
SATB2-204ENST00000440919 TTC41PQ6P2S7 1318 aa21.25■□□□□ 0.99
SATB2-204ENST00000440919 C1orf167Q5SNV9 1468 aa21.25■□□□□ 0.99
SATB2-204ENST00000440919 AK2P54819 239 aa21.25■□□□□ 0.99
SATB2-204ENST00000440919 PHRF1Q9P1Y6 1649 aaKnown RBP21.24■□□□□ 0.99
SATB2-204ENST00000440919 MTX1Q13505 466 aa21.24■□□□□ 0.99
SATB2-204ENST00000440919 HSP90AA2PQ14568 343 aaPredicted RBP21.24■□□□□ 0.99
SATB2-204ENST00000440919 CWC27Q6UX04 472 aaKnown RBP21.24■□□□□ 0.99
SATB2-204ENST00000440919 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
SATB2-204ENST00000440919 ANXA1P04083 346 aa21.24■□□□□ 0.99
SATB2-204ENST00000440919 ATF3P18847 181 aa21.24■□□□□ 0.99
SATB2-204ENST00000440919 TMEM94Q12767 1356 aa21.24■□□□□ 0.99
SATB2-204ENST00000440919 GLRX3O76003 335 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms