RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 A0A0G2JS52 829 aa25.58■■□□□ 1.68
VRK2-207ENST00000440705 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.68
VRK2-207ENST00000440705 MYT1Q01538 1121 aa25.58■■□□□ 1.68
VRK2-207ENST00000440705 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.68
VRK2-207ENST00000440705 USP16Q9Y5T5 823 aa25.58■■□□□ 1.68
VRK2-207ENST00000440705 DOT1LQ8TEK3 1739 aa25.57■■□□□ 1.68
VRK2-207ENST00000440705 ZBTB7BO15156 539 aaPredicted RBP25.57■■□□□ 1.68
VRK2-207ENST00000440705 SYTL4Q96C24 671 aaPredicted RBP25.57■■□□□ 1.68
VRK2-207ENST00000440705 GLI3P10071 1580 aa25.57■■□□□ 1.68
VRK2-207ENST00000440705 THSD7AQ9UPZ6 1657 aa25.56■■□□□ 1.68
VRK2-207ENST00000440705 PTCD1O75127 700 aaKnown RBP25.56■■□□□ 1.68
VRK2-207ENST00000440705 CCT4P50991 539 aaKnown RBP25.56■■□□□ 1.68
VRK2-207ENST00000440705 ATG3Q9NT62 314 aa25.56■■□□□ 1.68
VRK2-207ENST00000440705 ASAP1Q9ULH1 1129 aa25.56■■□□□ 1.68
VRK2-207ENST00000440705 LAMB4A4D0S4 1761 aa25.56■■□□□ 1.68
VRK2-207ENST00000440705 VSIG10Q8N0Z9 540 aa25.55■■□□□ 1.68
VRK2-207ENST00000440705 F6X3S4 739 aa25.55■■□□□ 1.68
VRK2-207ENST00000440705 SLC4A10Q6U841 1118 aa25.55■■□□□ 1.68
VRK2-207ENST00000440705 QTRT2Q9H974 415 aaKnown RBP25.55■■□□□ 1.68
VRK2-207ENST00000440705 ONECUT3O60422 494 aaPredicted RBP25.54■■□□□ 1.68
VRK2-207ENST00000440705 PDIA6Q15084 440 aa25.54■■□□□ 1.68
VRK2-207ENST00000440705 CENPQQ7L2Z9 268 aaPredicted RBP25.54■■□□□ 1.68
VRK2-207ENST00000440705 ERBB4Q15303 1308 aa25.53■■□□□ 1.68
VRK2-207ENST00000440705 ANXA1P04083 346 aa25.53■■□□□ 1.68
VRK2-207ENST00000440705 PROSER3Q2NL68 480 aa25.53■■□□□ 1.68
VRK2-207ENST00000440705 TEX13AQ9BXU3 409 aaPredicted RBP25.53■■□□□ 1.68
VRK2-207ENST00000440705 PCDHB15Q9Y5E8 787 aa25.53■■□□□ 1.68
VRK2-207ENST00000440705 PXDNLA1KZ92 1463 aa25.52■■□□□ 1.68
VRK2-207ENST00000440705 KDM2BQ8NHM5 1336 aa25.52■■□□□ 1.68
VRK2-207ENST00000440705 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
VRK2-207ENST00000440705 ACSBG1Q96GR2 724 aa25.5■■□□□ 1.67
VRK2-207ENST00000440705 RWDD1Q9H446 243 aaPredicted RBP25.49■■□□□ 1.67
VRK2-207ENST00000440705 PI4KAP2A4QPH2 592 aa25.48■■□□□ 1.67
VRK2-207ENST00000440705 PI4KAP1Q8N8J0 262 aa25.48■■□□□ 1.67
VRK2-207ENST00000440705 DNAAF4Q8WXU2 420 aa25.48■■□□□ 1.67
VRK2-207ENST00000440705 RBM42Q9BTD8 480 aaKnown RBP25.48■■□□□ 1.67
VRK2-207ENST00000440705 MYL6BP14649 208 aa25.48■■□□□ 1.67
VRK2-207ENST00000440705 KSR2Q6VAB6 950 aa25.48■■□□□ 1.67
VRK2-207ENST00000440705 N4BP2Q86UW6 1770 aaPredicted RBP25.47■■□□□ 1.67
VRK2-207ENST00000440705 IGHDP01880 384 aa25.47■■□□□ 1.67
VRK2-207ENST00000440705 STARD3NLO95772 234 aa25.45■■□□□ 1.67
VRK2-207ENST00000440705 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.67
VRK2-207ENST00000440705 SEPT12Q8IYM1 358 aa25.45■■□□□ 1.67
VRK2-207ENST00000440705 FBXO41Q8TF61 875 aa25.45■■□□□ 1.67
VRK2-207ENST00000440705 ADCY9O60503 1353 aa25.45■■□□□ 1.67
VRK2-207ENST00000440705 LRP10Q7Z4F1 713 aa25.45■■□□□ 1.66
VRK2-207ENST00000440705 AIMP1Q12904 312 aaKnown RBP25.44■■□□□ 1.66
VRK2-207ENST00000440705 HDAC1Q13547 482 aaPredicted RBP25.44■■□□□ 1.66
VRK2-207ENST00000440705 COPS6Q7L5N1 327 aa25.44■■□□□ 1.66
VRK2-207ENST00000440705 XAGE3Q8WTP9 111 aa25.44■■□□□ 1.66
VRK2-207ENST00000440705 SMARCC1Q92922 1105 aaPredicted RBP25.44■■□□□ 1.66
VRK2-207ENST00000440705 SRCIN1Q9C0H9 1055 aa25.44■■□□□ 1.66
VRK2-207ENST00000440705 MAP3K2Q9Y2U5 619 aa25.43■■□□□ 1.66
VRK2-207ENST00000440705 ATP10DQ9P241 1426 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 DNAJC10Q8IXB1 793 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 NBPF26B4DH59 902 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 KCNQ2O43526 872 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 A1BGP04217 495 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 GNAI3P08754 354 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 BEND3Q5T5X7 828 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 NBPF14Q5TI25 921 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 NBPF10Q6P3W6 841 aaKnown RBP25.42■■□□□ 1.66
VRK2-207ENST00000440705 NBPF15Q8N660 670 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 MEIS3Q99687 375 aa25.42■■□□□ 1.66
VRK2-207ENST00000440705 RIC3Q7Z5B4 369 aa25.41■■□□□ 1.66
VRK2-207ENST00000440705 PIP4K2AP48426 406 aaPredicted RBP25.4■■□□□ 1.66
VRK2-207ENST00000440705 ANKRD13DQ6ZTN6 518 aa25.4■■□□□ 1.66
VRK2-207ENST00000440705 SLC4A9Q96Q91 983 aa25.39■■□□□ 1.66
VRK2-207ENST00000440705 C1orf115Q9H7X2 142 aa25.39■■□□□ 1.66
VRK2-207ENST00000440705 ALDH1L1O75891 902 aa25.39■■□□□ 1.65
VRK2-207ENST00000440705 PALLDQ8WX93 1383 aa25.37■■□□□ 1.65
VRK2-207ENST00000440705 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
VRK2-207ENST00000440705 RPAP2Q8IXW5 612 aaPredicted RBP25.37■■□□□ 1.65
VRK2-207ENST00000440705 LINS1Q8NG48 757 aa25.37■■□□□ 1.65
VRK2-207ENST00000440705 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 GNAI2P04899 355 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 SIK1P57059 783 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
VRK2-207ENST00000440705 NEXNQ0ZGT2 675 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 PLBD2Q8NHP8 589 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 USP44Q9H0E7 712 aa25.36■■□□□ 1.65
VRK2-207ENST00000440705 NHSQ6T4R5 1651 aa25.35■■□□□ 1.65
VRK2-207ENST00000440705 METTL22Q9BUU2 404 aaPredicted RBP25.35■■□□□ 1.65
VRK2-207ENST00000440705 TJP1Q07157 1748 aa25.35■■□□□ 1.65
VRK2-207ENST00000440705 ATP6V1AP38606 617 aa25.34■■□□□ 1.65
VRK2-207ENST00000440705 UBTFL1P0CB47 393 aaPredicted RBP25.33■■□□□ 1.65
VRK2-207ENST00000440705 FAM182BQ5T319 152 aa25.33■■□□□ 1.65
VRK2-207ENST00000440705 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
VRK2-207ENST00000440705 IBTKQ9P2D0 1353 aaPredicted RBP25.33■■□□□ 1.65
VRK2-207ENST00000440705 CICQ96RK0 1608 aaPredicted RBP25.33■■□□□ 1.65
VRK2-207ENST00000440705 KRT27Q7Z3Y8 459 aa25.32■■□□□ 1.64
VRK2-207ENST00000440705 SIRT2Q8IXJ6 389 aa25.32■■□□□ 1.64
VRK2-207ENST00000440705 HDAC5Q9UQL6 1122 aa25.32■■□□□ 1.64
VRK2-207ENST00000440705 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
VRK2-207ENST00000440705 CEP85Q6P2H3 762 aa25.31■■□□□ 1.64
VRK2-207ENST00000440705 SMC5Q8IY18 1101 aa25.31■■□□□ 1.64
VRK2-207ENST00000440705 SBF2Q86WG5 1849 aa25.31■■□□□ 1.64
VRK2-207ENST00000440705 ARFGEF2Q9Y6D5 1785 aa25.3■■□□□ 1.64
VRK2-207ENST00000440705 TTLL7Q6ZT98 887 aa25.3■■□□□ 1.64
VRK2-207ENST00000440705 BTAF1O14981 1849 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms