RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 RTF1Q92541 710 aaKnown RBP18.1■□□□□ 0.49
GARNL3-206ENST00000439286 GOLGB1Q14789 3259 aaKnown RBP18.09■□□□□ 0.49
GARNL3-206ENST00000439286 SERPINB2P05120 415 aa18.09■□□□□ 0.49
GARNL3-206ENST00000439286 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
GARNL3-206ENST00000439286 CHRNA5P30532 468 aa18.09■□□□□ 0.49
GARNL3-206ENST00000439286 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
GARNL3-206ENST00000439286 NFIXQ14938 502 aa18.09■□□□□ 0.49
GARNL3-206ENST00000439286 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
GARNL3-206ENST00000439286 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
GARNL3-206ENST00000439286 MRC1P22897 1456 aa18.08■□□□□ 0.49
GARNL3-206ENST00000439286 BTBD11A6QL63 1104 aa18.08■□□□□ 0.48
GARNL3-206ENST00000439286 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
GARNL3-206ENST00000439286 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
GARNL3-206ENST00000439286 C4AP0C0L4 1744 aa18.07■□□□□ 0.48
GARNL3-206ENST00000439286 HSPA6P17066 643 aa18.07■□□□□ 0.48
GARNL3-206ENST00000439286 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
GARNL3-206ENST00000439286 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
GARNL3-206ENST00000439286 KIF3CO14782 793 aa18.06■□□□□ 0.48
GARNL3-206ENST00000439286 NEFMP07197 916 aa18.06■□□□□ 0.48
GARNL3-206ENST00000439286 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
GARNL3-206ENST00000439286 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
GARNL3-206ENST00000439286 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
GARNL3-206ENST00000439286 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
GARNL3-206ENST00000439286 H0YIN7 160 aa18.05■□□□□ 0.48
GARNL3-206ENST00000439286 NPHP1O15259 732 aa18.05■□□□□ 0.48
GARNL3-206ENST00000439286 PPP2R1AP30153 589 aa18.05■□□□□ 0.48
GARNL3-206ENST00000439286 C16orf71Q8IYS4 520 aaPredicted RBP18.05■□□□□ 0.48
GARNL3-206ENST00000439286 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
GARNL3-206ENST00000439286 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
GARNL3-206ENST00000439286 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
GARNL3-206ENST00000439286 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
GARNL3-206ENST00000439286 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
GARNL3-206ENST00000439286 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
GARNL3-206ENST00000439286 TOMM70O94826 608 aa18.03■□□□□ 0.48
GARNL3-206ENST00000439286 C2CD5Q86YS7 1000 aa18.03■□□□□ 0.48
GARNL3-206ENST00000439286 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
GARNL3-206ENST00000439286 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
GARNL3-206ENST00000439286 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
GARNL3-206ENST00000439286 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
GARNL3-206ENST00000439286 TJP1Q07157 1748 aa18.01■□□□□ 0.47
GARNL3-206ENST00000439286 A1BGP04217 495 aa18.01■□□□□ 0.47
GARNL3-206ENST00000439286 PDE6BP35913 854 aa18.01■□□□□ 0.47
GARNL3-206ENST00000439286 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
GARNL3-206ENST00000439286 CEMIPQ8WUJ3 1361 aa18.01■□□□□ 0.47
GARNL3-206ENST00000439286 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
GARNL3-206ENST00000439286 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
GARNL3-206ENST00000439286 MCM10Q7L590 875 aa18■□□□□ 0.47
GARNL3-206ENST00000439286 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
GARNL3-206ENST00000439286 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
GARNL3-206ENST00000439286 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
GARNL3-206ENST00000439286 KCNQ3O43525 872 aa17.99■□□□□ 0.47
GARNL3-206ENST00000439286 SNRPA1P09661 255 aaKnown RBP17.99■□□□□ 0.47
GARNL3-206ENST00000439286 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
GARNL3-206ENST00000439286 BRIP1Q9BX63 1249 aa17.99■□□□□ 0.47
GARNL3-206ENST00000439286 APLP1P51693 650 aa17.98■□□□□ 0.47
GARNL3-206ENST00000439286 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
GARNL3-206ENST00000439286 LMNB1P20700 586 aa17.97■□□□□ 0.47
GARNL3-206ENST00000439286 ST5P78524 1137 aa17.97■□□□□ 0.47
GARNL3-206ENST00000439286 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
GARNL3-206ENST00000439286 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
GARNL3-206ENST00000439286 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
GARNL3-206ENST00000439286 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
GARNL3-206ENST00000439286 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.47
GARNL3-206ENST00000439286 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
GARNL3-206ENST00000439286 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
GARNL3-206ENST00000439286 PNNQ9H307 717 aaKnown RBP17.96■□□□□ 0.47
GARNL3-206ENST00000439286 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
GARNL3-206ENST00000439286 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
GARNL3-206ENST00000439286 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
GARNL3-206ENST00000439286 RASSF7Q02833 373 aa17.95■□□□□ 0.46
GARNL3-206ENST00000439286 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
GARNL3-206ENST00000439286 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
GARNL3-206ENST00000439286 CLEC4GQ6UXB4 293 aa17.94■□□□□ 0.46
GARNL3-206ENST00000439286 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
GARNL3-206ENST00000439286 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
GARNL3-206ENST00000439286 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
GARNL3-206ENST00000439286 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
GARNL3-206ENST00000439286 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
GARNL3-206ENST00000439286 CNKSR1Q969H4 720 aa17.93■□□□□ 0.46
GARNL3-206ENST00000439286 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
GARNL3-206ENST00000439286 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
GARNL3-206ENST00000439286 C21orf2O43822 256 aa17.92■□□□□ 0.46
GARNL3-206ENST00000439286 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
GARNL3-206ENST00000439286 FSTL1Q12841 308 aa17.92■□□□□ 0.46
GARNL3-206ENST00000439286 DPY19L2Q6NUT2 758 aa17.92■□□□□ 0.46
GARNL3-206ENST00000439286 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
GARNL3-206ENST00000439286 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
GARNL3-206ENST00000439286 GLTPD2A6NH11 291 aa17.9■□□□□ 0.46
GARNL3-206ENST00000439286 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
GARNL3-206ENST00000439286 STYK1Q6J9G0 422 aa17.9■□□□□ 0.46
GARNL3-206ENST00000439286 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
GARNL3-206ENST00000439286 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
GARNL3-206ENST00000439286 VEGFAP15692 232 aaPredicted RBP17.89■□□□□ 0.45
GARNL3-206ENST00000439286 GTF2E1P29083 439 aaPredicted RBP17.89■□□□□ 0.45
GARNL3-206ENST00000439286 SMC1BQ8NDV3 1235 aa17.89■□□□□ 0.45
GARNL3-206ENST00000439286 NFKBIEO00221 500 aa17.88■□□□□ 0.45
GARNL3-206ENST00000439286 RGL2O15211 777 aa17.88■□□□□ 0.45
GARNL3-206ENST00000439286 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
GARNL3-206ENST00000439286 SRGNP10124 158 aa17.87■□□□□ 0.45
GARNL3-206ENST00000439286 NFE2L2Q16236 605 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms