RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 EGFL7Q9UHF1 273 aa6.35□□□□□ -1.39
LINC00415-201ENST00000439079 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00415-201ENST00000439079 CDC42BPAQ5VT25 1732 aa6.35□□□□□ -1.39
LINC00415-201ENST00000439079 PREX2Q70Z35 1606 aa6.35□□□□□ -1.39
LINC00415-201ENST00000439079 NR1I2O75469 434 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 EIF4G2P78344 907 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 BLOC1S3Q6QNY0 202 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 RNF19BQ6ZMZ0 732 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 SCUBE3Q8IX30 993 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 CLP1Q92989 425 aaKnown RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 TSR3Q9UJK0 312 aaKnown RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 NOP58Q9Y2X3 529 aaKnown RBP6.34□□□□□ -1.39
LINC00415-201ENST00000439079 PLXNC1O60486 1568 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 SAMD9LQ8IVG5 1584 aa6.34□□□□□ -1.39
LINC00415-201ENST00000439079 A2ML1A8K2U0 1454 aa6.34□□□□□ -1.4
LINC00415-201ENST00000439079 RNF17Q9BXT8 1623 aaKnown RBP6.33□□□□□ -1.4
LINC00415-201ENST00000439079 FMNL1O95466 1100 aaPredicted RBP6.33□□□□□ -1.4
LINC00415-201ENST00000439079 RNF187Q5TA31 235 aaPredicted RBP6.33□□□□□ -1.4
LINC00415-201ENST00000439079 CCAR1Q8IX12 1150 aaKnown RBP6.33□□□□□ -1.4
LINC00415-201ENST00000439079 NFATC2IPQ8NCF5 419 aa6.33□□□□□ -1.4
LINC00415-201ENST00000439079 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
LINC00415-201ENST00000439079 ZMIZ1Q9ULJ6 1067 aa6.33□□□□□ -1.4
LINC00415-201ENST00000439079 HPS5Q9UPZ3 1129 aa6.33□□□□□ -1.4
LINC00415-201ENST00000439079 LRRC7Q96NW7 1537 aa6.33□□□□□ -1.4
LINC00415-201ENST00000439079 FAM196BA6NMK8 535 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 PTMSP20962 102 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 APLP1P51693 650 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 NR1H3Q13133 447 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 KANK4Q5T7N3 995 aaPredicted RBP6.32□□□□□ -1.4
LINC00415-201ENST00000439079 THAP11Q96EK4 314 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 ASB16Q96NS5 453 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
LINC00415-201ENST00000439079 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 ZC3H13Q5T200 1668 aaKnown RBP6.32□□□□□ -1.4
LINC00415-201ENST00000439079 DEPDC5O75140 1603 aa6.32□□□□□ -1.4
LINC00415-201ENST00000439079 IQGAP1P46940 1657 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 BCAMP50895 628 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 PTPRNQ16849 979 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 ANKRD13DQ6ZTN6 518 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 RNF135Q8IUD6 432 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 WNT2BQ93097 391 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 SPACA7Q96KW9 195 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
LINC00415-201ENST00000439079 FKBPLQ9UIM3 349 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 TBX22Q9Y458 520 aa6.31□□□□□ -1.4
LINC00415-201ENST00000439079 TROQ12816 1431 aaPredicted RBP6.31□□□□□ -1.4
LINC00415-201ENST00000439079 INO80Q9ULG1 1556 aaPredicted RBP6.31□□□□□ -1.4
LINC00415-201ENST00000439079 MED14O60244 1454 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 ZBBXA8MT70 800 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 F12P00748 615 aaPredicted RBP6.3□□□□□ -1.4
LINC00415-201ENST00000439079 JUNDP17535 347 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 HDLBPQ00341 1268 aaKnown RBP6.3□□□□□ -1.4
LINC00415-201ENST00000439079 RALBP1Q15311 655 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 CCDC144BQ3MJ40 725 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 EAPPQ56P03 285 aaPredicted RBP6.3□□□□□ -1.4
LINC00415-201ENST00000439079 TBC1D9Q6ZT07 1266 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 STK32AQ8WU08 396 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 BACH2Q9BYV9 841 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 METTL5Q9NRN9 209 aaKnown RBP6.3□□□□□ -1.4
LINC00415-201ENST00000439079 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 SYNMO15061 1565 aa6.3□□□□□ -1.4
LINC00415-201ENST00000439079 CFAP65Q6ZU64 1925 aaKnown RBP6.29□□□□□ -1.4
LINC00415-201ENST00000439079 CCDC194A0A1B0GVG4 234 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 FBXO45P0C2W1 286 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 HSD3B2P26439 372 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 SERPINB4P48594 390 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 MRPL58Q14197 206 aaKnown RBP6.29□□□□□ -1.4
LINC00415-201ENST00000439079 SWI5Q1ZZU3 235 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 GMLQ99445 158 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 ATP7AQ04656 1500 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 SYCP2Q9BX26 1530 aa6.29□□□□□ -1.4
LINC00415-201ENST00000439079 NPHP4O75161 1426 aaPredicted RBP6.28□□□□□ -1.4
LINC00415-201ENST00000439079 ATP2B4P23634 1241 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 RBL2Q08999 1139 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 MSS51Q4VC12 460 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
LINC00415-201ENST00000439079 FAM200AQ8TCP9 573 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 TINF2Q9BSI4 451 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 ADGBQ8N7X0 1667 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00415-201ENST00000439079 A2MP01023 1474 aa6.28□□□□□ -1.4
LINC00415-201ENST00000439079 MAPK1P28482 360 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 CTHP32929 405 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 GTF2F1P35269 517 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00415-201ENST00000439079 PSME1Q06323 249 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 LARP1Q6PKG0 1096 aaKnown RBP6.27□□□□□ -1.41
LINC00415-201ENST00000439079 ARMC2Q8NEN0 867 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 GPATCH3Q96I76 525 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 SPSB2Q99619 263 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 EVA1BQ9NVM1 165 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 WBP1LQ9NX94 342 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms