RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
EDEM1-202ENST00000434243 C10orf71Q711Q0 1435 aa17.74■□□□□ 0.43
EDEM1-202ENST00000434243 MCM10Q7L590 875 aa17.74■□□□□ 0.43
EDEM1-202ENST00000434243 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
EDEM1-202ENST00000434243 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
EDEM1-202ENST00000434243 KCNQ3O43525 872 aa17.73■□□□□ 0.43
EDEM1-202ENST00000434243 TM4SF1P30408 202 aa17.73■□□□□ 0.43
EDEM1-202ENST00000434243 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
EDEM1-202ENST00000434243 ZNF526Q8TF50 670 aaPredicted RBP17.73■□□□□ 0.43
EDEM1-202ENST00000434243 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
EDEM1-202ENST00000434243 UTRNP46939 3433 aa17.73■□□□□ 0.43
EDEM1-202ENST00000434243 CEMIPQ8WUJ3 1361 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 C1QTNF8P60827 252 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
EDEM1-202ENST00000434243 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
EDEM1-202ENST00000434243 A0A087WZG4 1122 aa17.71■□□□□ 0.43
EDEM1-202ENST00000434243 NFIXQ14938 502 aa17.71■□□□□ 0.43
EDEM1-202ENST00000434243 BICDL1Q6ZP65 573 aa17.71■□□□□ 0.43
EDEM1-202ENST00000434243 GPBP1L1Q9HC44 474 aaPredicted RBP17.71■□□□□ 0.43
EDEM1-202ENST00000434243 PIM2Q9P1W9 311 aa17.71■□□□□ 0.43
EDEM1-202ENST00000434243 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
EDEM1-202ENST00000434243 A1BGP04217 495 aa17.69■□□□□ 0.42
EDEM1-202ENST00000434243 CHRNA5P30532 468 aa17.69■□□□□ 0.42
EDEM1-202ENST00000434243 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
EDEM1-202ENST00000434243 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
EDEM1-202ENST00000434243 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
EDEM1-202ENST00000434243 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
EDEM1-202ENST00000434243 SERPINB2P05120 415 aa17.68■□□□□ 0.42
EDEM1-202ENST00000434243 KCNA3P22001 575 aa17.68■□□□□ 0.42
EDEM1-202ENST00000434243 DALRD3Q5D0E6 543 aaKnown RBP17.68■□□□□ 0.42
EDEM1-202ENST00000434243 IL6STP40189 918 aaPredicted RBP17.67■□□□□ 0.42
EDEM1-202ENST00000434243 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
EDEM1-202ENST00000434243 USP16Q9Y5T5 823 aa17.67■□□□□ 0.42
EDEM1-202ENST00000434243 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
EDEM1-202ENST00000434243 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
EDEM1-202ENST00000434243 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
EDEM1-202ENST00000434243 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
EDEM1-202ENST00000434243 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
EDEM1-202ENST00000434243 TBC1D9BQ66K14 1250 aa17.65■□□□□ 0.42
EDEM1-202ENST00000434243 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
EDEM1-202ENST00000434243 N4BP2Q86UW6 1770 aaPredicted RBP17.65■□□□□ 0.42
EDEM1-202ENST00000434243 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
EDEM1-202ENST00000434243 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
EDEM1-202ENST00000434243 ADCY9O60503 1353 aa17.65■□□□□ 0.42
EDEM1-202ENST00000434243 NPHP1O15259 732 aa17.64■□□□□ 0.41
EDEM1-202ENST00000434243 RALBP1Q15311 655 aa17.64■□□□□ 0.41
EDEM1-202ENST00000434243 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
EDEM1-202ENST00000434243 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
EDEM1-202ENST00000434243 DZIP3Q86Y13 1208 aaKnown RBP17.63■□□□□ 0.41
EDEM1-202ENST00000434243 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
EDEM1-202ENST00000434243 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
EDEM1-202ENST00000434243 C2CD5Q86YS7 1000 aa17.62■□□□□ 0.41
EDEM1-202ENST00000434243 H0YIN7 160 aa17.61■□□□□ 0.41
EDEM1-202ENST00000434243 C9orf131Q5VYM1 1079 aa17.61■□□□□ 0.41
EDEM1-202ENST00000434243 CCDC24Q8N4L8 307 aa17.61■□□□□ 0.41
EDEM1-202ENST00000434243 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
EDEM1-202ENST00000434243 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
EDEM1-202ENST00000434243 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
EDEM1-202ENST00000434243 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
EDEM1-202ENST00000434243 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
EDEM1-202ENST00000434243 SIPA1L3O60292 1781 aaPredicted RBP17.59■□□□□ 0.41
EDEM1-202ENST00000434243 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
EDEM1-202ENST00000434243 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.4
EDEM1-202ENST00000434243 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
EDEM1-202ENST00000434243 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■□□□□ 8.8
EDEM1-202ENST00000434243 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
EDEM1-202ENST00000434243 PDE6BP35913 854 aa17.57■□□□□ 0.4
EDEM1-202ENST00000434243 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
EDEM1-202ENST00000434243 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
EDEM1-202ENST00000434243 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
EDEM1-202ENST00000434243 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
EDEM1-202ENST00000434243 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
EDEM1-202ENST00000434243 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
EDEM1-202ENST00000434243 RIPK4P57078 832 aa17.56■□□□□ 0.4
EDEM1-202ENST00000434243 ST5P78524 1137 aa17.56■□□□□ 0.4
EDEM1-202ENST00000434243 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
EDEM1-202ENST00000434243 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
EDEM1-202ENST00000434243 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
EDEM1-202ENST00000434243 RASSF7Q02833 373 aa17.55■□□□□ 0.4
EDEM1-202ENST00000434243 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
EDEM1-202ENST00000434243 KIF3CO14782 793 aa17.54■□□□□ 0.4
EDEM1-202ENST00000434243 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
EDEM1-202ENST00000434243 CLEC4GQ6UXB4 293 aa17.54■□□□□ 0.4
EDEM1-202ENST00000434243 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
EDEM1-202ENST00000434243 TSPYL4Q9UJ04 414 aa17.54■□□□□ 0.4
EDEM1-202ENST00000434243 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
EDEM1-202ENST00000434243 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
EDEM1-202ENST00000434243 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
EDEM1-202ENST00000434243 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
EDEM1-202ENST00000434243 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
EDEM1-202ENST00000434243 NIP7Q9Y221 180 aaKnown RBP eCLIP17.53■□□□□ 0.4
EDEM1-202ENST00000434243 MYL6BP14649 208 aa17.52■□□□□ 0.4
EDEM1-202ENST00000434243 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
EDEM1-202ENST00000434243 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
EDEM1-202ENST00000434243 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
EDEM1-202ENST00000434243 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
EDEM1-202ENST00000434243 TMPOP42166 694 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms