RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-205ENST00000433369 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
PTPN12-205ENST00000433369 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
PTPN12-205ENST00000433369 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
PTPN12-205ENST00000433369 THUMPD2Q9BTF0 503 aaKnown RBP16.8■□□□□ 0.28
PTPN12-205ENST00000433369 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
PTPN12-205ENST00000433369 COL15A1P39059 1388 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
PTPN12-205ENST00000433369 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
PTPN12-205ENST00000433369 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
PTPN12-205ENST00000433369 A1BGP04217 495 aa16.78■□□□□ 0.28
PTPN12-205ENST00000433369 DDR1Q08345 913 aa16.78■□□□□ 0.28
PTPN12-205ENST00000433369 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
PTPN12-205ENST00000433369 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.28
PTPN12-205ENST00000433369 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
PTPN12-205ENST00000433369 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
PTPN12-205ENST00000433369 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
PTPN12-205ENST00000433369 STARD3NLO95772 234 aa16.76■□□□□ 0.27
PTPN12-205ENST00000433369 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
PTPN12-205ENST00000433369 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
PTPN12-205ENST00000433369 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
PTPN12-205ENST00000433369 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
PTPN12-205ENST00000433369 NEFMP07197 916 aa16.75■□□□□ 0.27
PTPN12-205ENST00000433369 TM4SF1P30408 202 aa16.75■□□□□ 0.27
PTPN12-205ENST00000433369 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
PTPN12-205ENST00000433369 NARFQ9UHQ1 456 aa16.75■□□□□ 0.27
PTPN12-205ENST00000433369 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
PTPN12-205ENST00000433369 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
PTPN12-205ENST00000433369 ZPR1O75312 459 aa16.74■□□□□ 0.27
PTPN12-205ENST00000433369 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
PTPN12-205ENST00000433369 SCN7AQ01118 1682 aa16.74■□□□□ 0.27
PTPN12-205ENST00000433369 NFIXQ14938 502 aa16.73■□□□□ 0.27
PTPN12-205ENST00000433369 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
PTPN12-205ENST00000433369 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
PTPN12-205ENST00000433369 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
PTPN12-205ENST00000433369 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
PTPN12-205ENST00000433369 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
PTPN12-205ENST00000433369 A0A0G2JLW4 131 aa16.72■□□□□ 0.27
PTPN12-205ENST00000433369 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
PTPN12-205ENST00000433369 RIPK4P57078 832 aa16.72■□□□□ 0.27
PTPN12-205ENST00000433369 PNNQ9H307 717 aaKnown RBP16.72■□□□□ 0.27
PTPN12-205ENST00000433369 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
PTPN12-205ENST00000433369 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
PTPN12-205ENST00000433369 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
PTPN12-205ENST00000433369 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
PTPN12-205ENST00000433369 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
PTPN12-205ENST00000433369 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
PTPN12-205ENST00000433369 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
PTPN12-205ENST00000433369 DPEP1P16444 411 aa16.7■□□□□ 0.26
PTPN12-205ENST00000433369 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
PTPN12-205ENST00000433369 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
PTPN12-205ENST00000433369 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
PTPN12-205ENST00000433369 KCNA3P22001 575 aa16.69■□□□□ 0.26
PTPN12-205ENST00000433369 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
PTPN12-205ENST00000433369 WDR43Q15061 677 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPN12-205ENST00000433369 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
PTPN12-205ENST00000433369 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
PTPN12-205ENST00000433369 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
PTPN12-205ENST00000433369 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
PTPN12-205ENST00000433369 TGFB2P61812 414 aa16.68■□□□□ 0.26
PTPN12-205ENST00000433369 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
PTPN12-205ENST00000433369 ZNF784Q8NCA9 323 aaPredicted RBP16.68■□□□□ 0.26
PTPN12-205ENST00000433369 RUNDC1Q96C34 613 aa16.68■□□□□ 0.26
PTPN12-205ENST00000433369 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
PTPN12-205ENST00000433369 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
PTPN12-205ENST00000433369 A0A087WZG4 1122 aa16.67■□□□□ 0.26
PTPN12-205ENST00000433369 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
PTPN12-205ENST00000433369 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
PTPN12-205ENST00000433369 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
PTPN12-205ENST00000433369 SERPINB2P05120 415 aa16.66■□□□□ 0.26
PTPN12-205ENST00000433369 CHRNA5P30532 468 aa16.66■□□□□ 0.26
PTPN12-205ENST00000433369 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
PTPN12-205ENST00000433369 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
PTPN12-205ENST00000433369 ARFGEF1Q9Y6D6 1849 aa16.65■□□□□ 0.26
PTPN12-205ENST00000433369 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
PTPN12-205ENST00000433369 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
PTPN12-205ENST00000433369 DLEC1Q9Y238 1755 aa16.64■□□□□ 0.25
PTPN12-205ENST00000433369 NUP98P52948 1817 aa16.62■□□□□ 0.25
PTPN12-205ENST00000433369 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
PTPN12-205ENST00000433369 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
PTPN12-205ENST00000433369 APAF1O14727 1248 aa16.61■□□□□ 0.25
PTPN12-205ENST00000433369 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
PTPN12-205ENST00000433369 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
PTPN12-205ENST00000433369 SENP3-EIF4A1A0A087X0R7 540 aa16.6■□□□□ 0.25
PTPN12-205ENST00000433369 HLFQ16534 295 aa16.6■□□□□ 0.25
PTPN12-205ENST00000433369 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
PTPN12-205ENST00000433369 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
PTPN12-205ENST00000433369 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
PTPN12-205ENST00000433369 CHL1O00533 1208 aa16.59■□□□□ 0.25
PTPN12-205ENST00000433369 MYL6BP14649 208 aa16.59■□□□□ 0.25
PTPN12-205ENST00000433369 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
PTPN12-205ENST00000433369 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
PTPN12-205ENST00000433369 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
PTPN12-205ENST00000433369 ADCY9O60503 1353 aa16.59■□□□□ 0.25
PTPN12-205ENST00000433369 ANXA1P04083 346 aa16.58■□□□□ 0.24
PTPN12-205ENST00000433369 PDIA6Q15084 440 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms