RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 SMIM5Q71RC9 77 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 SMARCC1Q92922 1105 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 TFCP2L1Q9NZI6 479 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 PALLDQ8WX93 1383 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 KDM6AO15550 1401 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 ZBTB7AO95365 584 aa7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 DCTN1Q14203 1278 aa7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 CCDC146Q8IYE0 955 aa7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 IL17REQ8NFR9 667 aa7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
HMGB3P24-201ENST00000433260 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 LOC102724428A0A0B4J2F2 783 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 ANP32CO43423 234 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 SIK1P57059 783 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 ITPK1Q13572 414 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 WDR43Q15061 677 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 NEUROD2Q15784 382 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 CCDC184Q52MB2 194 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 MCM10Q7L590 875 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 EFCAB3Q8N7B9 438 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 RTF1Q92541 710 aaKnown RBP7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 SLC52A2Q9HAB3 445 aa7.65□□□□□ -1.18
HMGB3P24-201ENST00000433260 TAF1LQ8IZX4 1826 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 MAPK8IP3Q9UPT6 1336 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 PHF14O94880 888 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 EVX2Q03828 476 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 TEFQ10587 303 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 LINC00116Q8NCU8 138 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 SLC4A9Q96Q91 983 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 PLEKHF1Q96S99 279 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 PNNQ9H307 717 aaKnown RBP7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 ADAMTS8Q9UP79 889 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
HMGB3P24-201ENST00000433260 C5P01031 1676 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 PLEKHG2Q9H7P9 1386 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 BTBD11A6QL63 1104 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 GALR2O43603 387 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 RIPK4P57078 832 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 COL23A1Q86Y22 540 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 AK7Q96M32 723 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 SPON1Q9HCB6 807 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 MIS18AQ9NYP9 233 aa7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 RRP7AQ9Y3A4 280 aaKnown RBP7.63□□□□□ -1.19
HMGB3P24-201ENST00000433260 KCNQ3O43525 872 aa7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 DNAJC10Q8IXB1 793 aa7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 TTC5Q8N0Z6 440 aa7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 THUMPD2Q9BTF0 503 aaKnown RBP7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 TSHZ2Q9NRE2 1034 aa7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 PPP1R1BQ9UD71 204 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 TUBGCP6Q96RT7 1819 aa7.62□□□□□ -1.19
HMGB3P24-201ENST00000433260 PAPPAQ13219 1627 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 TTLL13PA6NNM8 815 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 GNPATO15228 680 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 NFE2L2Q16236 605 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 AMIGO3Q86WK7 504 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 RUNDC1Q96C34 613 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 MRS2Q9HD23 443 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 TRPC6Q9Y210 931 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 C4BP0C0L5 1744 aa7.61□□□□□ -1.19
HMGB3P24-201ENST00000433260 EP400Q96L91 3159 aa7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 HMGB2P26583 209 aaKnown RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 TMPOP42166 694 aaKnown RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 TAF7Q15545 349 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 ZNF790Q6PG37 636 aa7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 ZNF496Q96IT1 587 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 MFRPQ9BY79 579 aa7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 MTFR1LQ9H019 292 aa7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 BMP2KQ9NSY1 1161 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 LAS1LQ9Y4W2 734 aaKnown RBP7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 CASZ1Q86V15 1759 aa7.6□□□□□ -1.19
HMGB3P24-201ENST00000433260 SIPA1L3O60292 1781 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 APAF1O14727 1248 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 GABBR2O75899 941 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 PTGER2P43116 358 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 CRKLP46109 303 aaKnown RBP7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 FAM9BQ8IZU0 186 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 DCBLD2Q96PD2 775 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 ARXQ96QS3 562 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 RTCBQ9Y3I0 505 aaKnown RBP7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 ZNF330Q9Y3S2 320 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 ADAMTS7Q9UKP4 1686 aa7.59□□□□□ -1.19
HMGB3P24-201ENST00000433260 UBR3Q6ZT12 1888 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 PRAMEF22A3QJZ6 481 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 RPS6KA4O75676 772 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 POLD1P28340 1107 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 RFC4P35249 363 aa7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 PIP4K2AP48426 406 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
HMGB3P24-201ENST00000433260 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms