RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 BRD1O95696 1058 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 GCP02774 474 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 GNAI2P04899 355 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 RBSNQ9H1K0 784 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 PXDNLA1KZ92 1463 aa17.91■□□□□ 0.46
DDX56-205ENST00000433257 HTATSF1O43719 755 aaKnown RBP17.9■□□□□ 0.46
DDX56-205ENST00000433257 PRIM1P49642 420 aaKnown RBP17.9■□□□□ 0.46
DDX56-205ENST00000433257 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
DDX56-205ENST00000433257 CRB1P82279 1406 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
DDX56-205ENST00000433257 GPT2Q8TD30 523 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 ESYT1Q9BSJ8 1104 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 CHMP4AQ9BY43 222 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 TSPY26PQ9H489 355 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 BABAM1Q9NWV8 329 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 LRP6O75581 1613 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 WDR33Q9C0J8 1336 aaKnown RBP17.89■□□□□ 0.45
DDX56-205ENST00000433257 USP31Q70CQ4 1352 aa17.89■□□□□ 0.45
DDX56-205ENST00000433257 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
DDX56-205ENST00000433257 SOX12O15370 315 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
DDX56-205ENST00000433257 C16orf71Q8IYS4 520 aaPredicted RBP17.88■□□□□ 0.45
DDX56-205ENST00000433257 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 STK31Q9BXU1 1019 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 STAP2Q9UGK3 403 aa17.88■□□□□ 0.45
DDX56-205ENST00000433257 FAM83GA6ND36 823 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 PDIA4P13667 645 aaKnown RBP17.87■□□□□ 0.45
DDX56-205ENST00000433257 NEK4P51957 841 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 SULT6B1Q6IMI4 303 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
DDX56-205ENST00000433257 MEIS3Q99687 375 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 PRDM11Q9NQV5 511 aa17.87■□□□□ 0.45
DDX56-205ENST00000433257 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
DDX56-205ENST00000433257 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
DDX56-205ENST00000433257 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
DDX56-205ENST00000433257 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
DDX56-205ENST00000433257 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
DDX56-205ENST00000433257 MX1P20591 662 aa17.85■□□□□ 0.45
DDX56-205ENST00000433257 SASS6Q6UVJ0 657 aa17.85■□□□□ 0.45
DDX56-205ENST00000433257 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
DDX56-205ENST00000433257 ATP6V1DQ9Y5K8 247 aa17.85■□□□□ 0.45
DDX56-205ENST00000433257 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
DDX56-205ENST00000433257 TMEM63CQ9P1W3 806 aa17.84■□□□□ 0.45
DDX56-205ENST00000433257 RAB11FIP3O75154 756 aa17.83■□□□□ 0.45
DDX56-205ENST00000433257 ATP8B2P98198 1209 aa17.83■□□□□ 0.45
DDX56-205ENST00000433257 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.45
DDX56-205ENST00000433257 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.45
DDX56-205ENST00000433257 OTUD7AQ8TE49 926 aaPredicted RBP17.83■□□□□ 0.45
DDX56-205ENST00000433257 LRRC37A3O60309 1634 aa17.83■□□□□ 0.45
DDX56-205ENST00000433257 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.44
DDX56-205ENST00000433257 AFF2P51816 1311 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 SYCE3A1L190 88 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 FBLN1P23142 703 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 KIAA2012Q0VF49 1180 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 DCTN1Q14203 1278 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 FNBP4Q8N3X1 1017 aaPredicted RBP17.83■□□□□ 0.44
DDX56-205ENST00000433257 USP21Q9UK80 565 aa17.83■□□□□ 0.44
DDX56-205ENST00000433257 SMARCA5O60264 1052 aaPredicted RBP17.82■□□□□ 0.44
DDX56-205ENST00000433257 TPM3P06753 285 aa17.82■□□□□ 0.44
DDX56-205ENST00000433257 HMGN5P82970 282 aaKnown RBP17.82■□□□□ 0.44
DDX56-205ENST00000433257 PKP1Q13835 747 aa17.82■□□□□ 0.44
DDX56-205ENST00000433257 CHRNA2Q15822 529 aa17.82■□□□□ 0.44
DDX56-205ENST00000433257 KDRP35968 1356 aa17.82■□□□□ 0.44
DDX56-205ENST00000433257 CHMLP26374 656 aa17.81■□□□□ 0.44
DDX56-205ENST00000433257 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
DDX56-205ENST00000433257 R3HCC1Q9Y3T6 440 aaKnown RBP17.81■□□□□ 0.44
DDX56-205ENST00000433257 CPDO75976 1380 aa17.81■□□□□ 0.44
DDX56-205ENST00000433257 SLIT3O75094 1523 aa17.81■□□□□ 0.44
DDX56-205ENST00000433257 PTMAP06454 111 aaKnown RBP17.8■□□□□ 0.44
DDX56-205ENST00000433257 PRIMPOLQ96LW4 560 aa17.8■□□□□ 0.44
DDX56-205ENST00000433257 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
DDX56-205ENST00000433257 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
DDX56-205ENST00000433257 ARHGEF25Q86VW2 580 aa17.8■□□□□ 0.44
DDX56-205ENST00000433257 PKNOX2Q96KN3 472 aa17.8■□□□□ 0.44
DDX56-205ENST00000433257 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
DDX56-205ENST00000433257 ABCA3Q99758 1704 aa17.8■□□□□ 0.44
DDX56-205ENST00000433257 FLT4P35916 1363 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 PEAK1Q9H792 1746 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 CRYBG1Q9Y4K1 1723 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 EVA1CP58658 441 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 ANO2Q9NQ90 1003 aa17.79■□□□□ 0.44
DDX56-205ENST00000433257 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
DDX56-205ENST00000433257 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
DDX56-205ENST00000433257 UQCRHLA0A096LP55 91 aa17.78■□□□□ 0.44
DDX56-205ENST00000433257 UQCRHP07919 91 aa17.78■□□□□ 0.44
DDX56-205ENST00000433257 MCM10Q7L590 875 aa17.78■□□□□ 0.44
DDX56-205ENST00000433257 UNC5CLQ8IV45 518 aa17.78■□□□□ 0.44
DDX56-205ENST00000433257 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
DDX56-205ENST00000433257 HSPA4P34932 840 aa17.77■□□□□ 0.44
DDX56-205ENST00000433257 HSP90AB4PQ58FF6 505 aa17.77■□□□□ 0.44
DDX56-205ENST00000433257 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.44
DDX56-205ENST00000433257 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms