RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 KRT32Q14532 448 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 MYD88Q99836 296 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 MYO1BO43795 1136 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 NOP2P46087 812 aaKnown RBP13.24□□□□□ -0.29
SEC16A-206ENST00000431893 MYOM3Q5VTT5 1437 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
SEC16A-206ENST00000431893 MKNK2Q9HBH9 465 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEC16A-206ENST00000431893 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
SEC16A-206ENST00000431893 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 PAFAH1B1P43034 410 aa13.23□□□□□ -0.29
SEC16A-206ENST00000431893 YEATS4O95619 227 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 CETN2P41208 172 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 TCERG1LQ5VWI1 586 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 APBB1IPQ7Z5R6 666 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 USO1O60763 962 aaKnown RBP13.22□□□□□ -0.29
SEC16A-206ENST00000431893 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
SEC16A-206ENST00000431893 NLRP5P59047 1200 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 MNAT1P51948 309 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.29
SEC16A-206ENST00000431893 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
SEC16A-206ENST00000431893 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.3
SEC16A-206ENST00000431893 IFIT1P09914 478 aaKnown RBP13.21□□□□□ -0.3
SEC16A-206ENST00000431893 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.3
SEC16A-206ENST00000431893 RGS22Q8NE09 1264 aa13.21□□□□□ -0.3
SEC16A-206ENST00000431893 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.3
SEC16A-206ENST00000431893 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 IGSF3O75054 1194 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 NAPBQ9H115 298 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 KIF2AO00139 706 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-206ENST00000431893 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
SEC16A-206ENST00000431893 MCM3P25205 808 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 HAND2P61296 217 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 CCDC160A6NGH7 325 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-206ENST00000431893 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-206ENST00000431893 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 PRC1O43663 620 aa13.2□□□□□ -0.3
SEC16A-206ENST00000431893 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 GNG11P61952 73 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
SEC16A-206ENST00000431893 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 STX1AQ16623 288 aa13.19□□□□□ -0.3
SEC16A-206ENST00000431893 CUX1P39880 1505 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 HSF2BPO75031 334 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
SEC16A-206ENST00000431893 SLFN5Q08AF3 891 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 TNIP1Q15025 636 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
SEC16A-206ENST00000431893 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 MXRA7P84157 204 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 ZNF213O14771 459 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 IDEP14735 1019 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 TMPOP42166 694 aaKnown RBP13.18□□□□□ -0.3
SEC16A-206ENST00000431893 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
SEC16A-206ENST00000431893 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
SEC16A-206ENST00000431893 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-206ENST00000431893 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-206ENST00000431893 PTGS1P23219 599 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
SEC16A-206ENST00000431893 GJC1P36383 396 aa13.17□□□□□ -0.3
SEC16A-206ENST00000431893 PPP4R3AQ6IN85 833 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms