RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.8■■■□□ 2.2
RUNDC3A-202ENST00000426726 SKAP1Q86WV1 359 aa28.79■■■□□ 2.2
RUNDC3A-202ENST00000426726 SMC5Q8IY18 1101 aa28.79■■■□□ 2.2
RUNDC3A-202ENST00000426726 ATP10DQ9P241 1426 aa28.79■■■□□ 2.2
RUNDC3A-202ENST00000426726 MEIS3Q99687 375 aa28.79■■■□□ 2.2
RUNDC3A-202ENST00000426726 BCL9LQ86UU0 1499 aa28.77■■■□□ 2.2
RUNDC3A-202ENST00000426726 ANXA1P04083 346 aa28.77■■■□□ 2.2
RUNDC3A-202ENST00000426726 PROSER3Q2NL68 480 aa28.77■■■□□ 2.2
RUNDC3A-202ENST00000426726 C8orf37Q96NL8 207 aa28.77■■■□□ 2.2
RUNDC3A-202ENST00000426726 NGLY1Q96IV0 654 aa28.77■■■□□ 2.2
RUNDC3A-202ENST00000426726 PDIA6Q15084 440 aa28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 DNAAF4Q8WXU2 420 aa28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 CCDC9Q9Y3X0 531 aaKnown RBP28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 ADCY9O60503 1353 aa28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 DDB1Q16531 1140 aa28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 PDZRN3Q9UPQ7 1066 aa28.76■■■□□ 2.19
RUNDC3A-202ENST00000426726 DOT1LQ8TEK3 1739 aa28.75■■■□□ 2.19
RUNDC3A-202ENST00000426726 GNAI3P08754 354 aa28.75■■■□□ 2.19
RUNDC3A-202ENST00000426726 RPAP2Q8IXW5 612 aaPredicted RBP28.75■■■□□ 2.19
RUNDC3A-202ENST00000426726 ERBB4Q15303 1308 aa28.75■■■□□ 2.19
RUNDC3A-202ENST00000426726 PI4KAP2A4QPH2 592 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 DDX58O95786 925 aaKnown RBP28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 VPS72Q15906 364 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 FNBP4Q8N3X1 1017 aaPredicted RBP28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 PI4KAP1Q8N8J0 262 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 RGS3P49796 1198 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 GCC1Q96CN9 775 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 SRCIN1Q9C0H9 1055 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 USP16Q9Y5T5 823 aa28.74■■■□□ 2.19
RUNDC3A-202ENST00000426726 SIRT2Q8IXJ6 389 aa28.73■■■□□ 2.19
RUNDC3A-202ENST00000426726 ANKRD44Q8N8A2 993 aa28.73■■■□□ 2.19
RUNDC3A-202ENST00000426726 BCL9O00512 1426 aa28.73■■■□□ 2.19
RUNDC3A-202ENST00000426726 KSR2Q6VAB6 950 aa28.72■■■□□ 2.19
RUNDC3A-202ENST00000426726 HSPA1LP34931 641 aa28.71■■■□□ 2.19
RUNDC3A-202ENST00000426726 CEP85Q6P2H3 762 aa28.7■■■□□ 2.19
RUNDC3A-202ENST00000426726 PIGBQ92521 554 aa28.7■■■□□ 2.19
RUNDC3A-202ENST00000426726 GNAI2P04899 355 aa28.7■■■□□ 2.18
RUNDC3A-202ENST00000426726 BEND3Q5T5X7 828 aa28.7■■■□□ 2.18
RUNDC3A-202ENST00000426726 MAP3K2Q9Y2U5 619 aa28.69■■■□□ 2.18
RUNDC3A-202ENST00000426726 PTCD1O75127 700 aaKnown RBP28.67■■■□□ 2.18
RUNDC3A-202ENST00000426726 MYL6BP14649 208 aa28.67■■■□□ 2.18
RUNDC3A-202ENST00000426726 LRP10Q7Z4F1 713 aa28.67■■■□□ 2.18
RUNDC3A-202ENST00000426726 VSIG10Q8N0Z9 540 aa28.67■■■□□ 2.18
RUNDC3A-202ENST00000426726 MSH5O43196 834 aa28.66■■■□□ 2.18
RUNDC3A-202ENST00000426726 ALDH1L1O75891 902 aa28.66■■■□□ 2.18
RUNDC3A-202ENST00000426726 USP44Q9H0E7 712 aa28.66■■■□□ 2.18
RUNDC3A-202ENST00000426726 HMMRO75330 724 aa28.65■■■□□ 2.18
RUNDC3A-202ENST00000426726 NUCB1Q02818 461 aa28.65■■■□□ 2.18
RUNDC3A-202ENST00000426726 IBTKQ9P2D0 1353 aaPredicted RBP28.65■■■□□ 2.18
RUNDC3A-202ENST00000426726 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
RUNDC3A-202ENST00000426726 USP21Q9UK80 565 aa28.65■■■□□ 2.18
RUNDC3A-202ENST00000426726 UBTFL1P0CB47 393 aaPredicted RBP28.64■■■□□ 2.18
RUNDC3A-202ENST00000426726 XAGE3Q8WTP9 111 aa28.64■■■□□ 2.18
RUNDC3A-202ENST00000426726 ASAP1Q9ULH1 1129 aa28.64■■■□□ 2.18
RUNDC3A-202ENST00000426726 AIMP1Q12904 312 aaKnown RBP28.64■■■□□ 2.17
RUNDC3A-202ENST00000426726 TEX13AQ9BXU3 409 aaPredicted RBP28.64■■■□□ 2.17
RUNDC3A-202ENST00000426726 MEX3CQ5U5Q3 659 aaKnown RBP28.63■■■□□ 2.17
RUNDC3A-202ENST00000426726 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
RUNDC3A-202ENST00000426726 PDE4AP27815 886 aa28.62■■■□□ 2.17
RUNDC3A-202ENST00000426726 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
RUNDC3A-202ENST00000426726 DCTPP1Q9H773 170 aa28.62■■■□□ 2.17
RUNDC3A-202ENST00000426726 ARFGEF2Q9Y6D5 1785 aa28.62■■■□□ 2.17
RUNDC3A-202ENST00000426726 LINS1Q8NG48 757 aa28.62■■■□□ 2.17
RUNDC3A-202ENST00000426726 FAM98CQ17RN3 349 aaKnown RBP28.61■■■□□ 2.17
RUNDC3A-202ENST00000426726 RIC3Q7Z5B4 369 aa28.61■■■□□ 2.17
RUNDC3A-202ENST00000426726 CHD1LQ86WJ1 897 aa28.61■■■□□ 2.17
RUNDC3A-202ENST00000426726 BACH2Q9BYV9 841 aa28.61■■■□□ 2.17
RUNDC3A-202ENST00000426726 THSD7AQ9UPZ6 1657 aa28.61■■■□□ 2.17
RUNDC3A-202ENST00000426726 SYTL4Q96C24 671 aaPredicted RBP28.6■■■□□ 2.17
RUNDC3A-202ENST00000426726 PRIM1P49642 420 aaKnown RBP28.59■■■□□ 2.17
RUNDC3A-202ENST00000426726 NEXNQ0ZGT2 675 aa28.59■■■□□ 2.17
RUNDC3A-202ENST00000426726 FAM161AQ3B820 660 aa28.59■■■□□ 2.17
RUNDC3A-202ENST00000426726 ANKRD13DQ6ZTN6 518 aa28.59■■■□□ 2.17
RUNDC3A-202ENST00000426726 LRRFIP2Q9Y608 721 aaKnown RBP28.59■■■□□ 2.17
RUNDC3A-202ENST00000426726 KAT6BQ8WYB5 2073 aa28.58■■■□□ 2.17
RUNDC3A-202ENST00000426726 NBPF26B4DH59 902 aa28.58■■■□□ 2.17
RUNDC3A-202ENST00000426726 NBPF14Q5TI25 921 aa28.58■■■□□ 2.17
RUNDC3A-202ENST00000426726 NBPF10Q6P3W6 841 aaKnown RBP28.58■■■□□ 2.17
RUNDC3A-202ENST00000426726 NBPF15Q8N660 670 aa28.58■■■□□ 2.17
RUNDC3A-202ENST00000426726 HDAC5Q9UQL6 1122 aa28.57■■■□□ 2.16
RUNDC3A-202ENST00000426726 PIP4K2AP48426 406 aaPredicted RBP28.57■■■□□ 2.16
RUNDC3A-202ENST00000426726 ANKRD45Q5TZF3 282 aa28.57■■■□□ 2.16
RUNDC3A-202ENST00000426726 METTL22Q9BUU2 404 aaPredicted RBP28.57■■■□□ 2.16
RUNDC3A-202ENST00000426726 NUP188Q5SRE5 1749 aa28.56■■■□□ 2.16
RUNDC3A-202ENST00000426726 ATP8B2P98198 1209 aa28.55■■■□□ 2.16
RUNDC3A-202ENST00000426726 RBM42Q9BTD8 480 aaKnown RBP28.55■■■□□ 2.16
RUNDC3A-202ENST00000426726 LNPKQ9C0E8 428 aa28.55■■■□□ 2.16
RUNDC3A-202ENST00000426726 TJP1Q07157 1748 aa28.55■■■□□ 2.16
RUNDC3A-202ENST00000426726 PLBD2Q8NHP8 589 aa28.55■■■□□ 2.16
RUNDC3A-202ENST00000426726 STARD3NLO95772 234 aa28.54■■■□□ 2.16
RUNDC3A-202ENST00000426726 A1BGP04217 495 aa28.54■■■□□ 2.16
RUNDC3A-202ENST00000426726 NBPF7P0C2Y1 421 aaPredicted RBP28.54■■■□□ 2.16
RUNDC3A-202ENST00000426726 C9orf78Q9NZ63 289 aaPredicted RBP28.54■■■□□ 2.16
RUNDC3A-202ENST00000426726 CICQ96RK0 1608 aaPredicted RBP28.54■■■□□ 2.16
RUNDC3A-202ENST00000426726 CWF19L2Q2TBE0 894 aaKnown RBP28.53■■■□□ 2.16
RUNDC3A-202ENST00000426726 DNAJC10Q8IXB1 793 aa28.53■■■□□ 2.16
RUNDC3A-202ENST00000426726 AFDNP55196 1824 aaKnown RBP28.53■■■□□ 2.16
RUNDC3A-202ENST00000426726 UTYO14607 1347 aa28.53■■■□□ 2.16
RUNDC3A-202ENST00000426726 AFF2P51816 1311 aa28.53■■■□□ 2.16
RUNDC3A-202ENST00000426726 IGKV5-2P06315 115 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms