RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
HDAC11-210ENST00000425430 SBF1O95248 1867 aa20.6■□□□□ 0.89
HDAC11-210ENST00000425430 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
HDAC11-210ENST00000425430 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
HDAC11-210ENST00000425430 MRC1P22897 1456 aa20.6■□□□□ 0.89
HDAC11-210ENST00000425430 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
HDAC11-210ENST00000425430 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
HDAC11-210ENST00000425430 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
HDAC11-210ENST00000425430 RRAGCQ9HB90 399 aa20.59■□□□□ 0.89
HDAC11-210ENST00000425430 TM4SF1P30408 202 aa20.58■□□□□ 0.89
HDAC11-210ENST00000425430 RASSF7Q02833 373 aa20.58■□□□□ 0.89
HDAC11-210ENST00000425430 FSTL1Q12841 308 aa20.58■□□□□ 0.89
HDAC11-210ENST00000425430 COL15A1P39059 1388 aa20.58■□□□□ 0.88
HDAC11-210ENST00000425430 DLEC1Q9Y238 1755 aa20.57■□□□□ 0.88
HDAC11-210ENST00000425430 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
HDAC11-210ENST00000425430 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
HDAC11-210ENST00000425430 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
HDAC11-210ENST00000425430 TIAM2Q8IVF5 1701 aa20.56■□□□□ 0.88
HDAC11-210ENST00000425430 NRXN2Q9P2S2 1712 aa20.56■□□□□ 0.88
HDAC11-210ENST00000425430 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
HDAC11-210ENST00000425430 HMOX1P09601 288 aa20.55■□□□□ 0.88
HDAC11-210ENST00000425430 CYP19A1P11511 503 aaPredicted RBP20.55■□□□□ 0.88
HDAC11-210ENST00000425430 NFIXQ14938 502 aa20.55■□□□□ 0.88
HDAC11-210ENST00000425430 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
HDAC11-210ENST00000425430 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
HDAC11-210ENST00000425430 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
HDAC11-210ENST00000425430 ZC3H4Q9UPT8 1303 aaKnown RBP20.52■□□□□ 0.87
HDAC11-210ENST00000425430 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
HDAC11-210ENST00000425430 CARMIL3Q8ND23 1372 aa20.51■□□□□ 0.87
HDAC11-210ENST00000425430 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
HDAC11-210ENST00000425430 SERPINB2P05120 415 aa20.51■□□□□ 0.87
HDAC11-210ENST00000425430 LMNB1P20700 586 aa20.5■□□□□ 0.87
HDAC11-210ENST00000425430 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
HDAC11-210ENST00000425430 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
HDAC11-210ENST00000425430 BCL2L12Q9HB09 334 aa20.5■□□□□ 0.87
HDAC11-210ENST00000425430 CCDC88AQ3V6T2 1871 aa20.5■□□□□ 0.87
HDAC11-210ENST00000425430 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
HDAC11-210ENST00000425430 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
HDAC11-210ENST00000425430 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
HDAC11-210ENST00000425430 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
HDAC11-210ENST00000425430 JMYQ8N9B5 988 aa20.49■□□□□ 0.87
HDAC11-210ENST00000425430 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
HDAC11-210ENST00000425430 PRELPP51888 382 aa20.47■□□□□ 0.87
HDAC11-210ENST00000425430 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
HDAC11-210ENST00000425430 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
HDAC11-210ENST00000425430 GLTPD2A6NH11 291 aa20.46■□□□□ 0.87
HDAC11-210ENST00000425430 H0YIN7 160 aa20.46■□□□□ 0.87
HDAC11-210ENST00000425430 COL13A1Q5TAT6 717 aaPredicted RBP20.46■□□□□ 0.87
HDAC11-210ENST00000425430 ANKRD31Q8N7Z5 1873 aa20.45■□□□□ 0.86
HDAC11-210ENST00000425430 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.86
HDAC11-210ENST00000425430 NFKBIEO00221 500 aa20.45■□□□□ 0.86
HDAC11-210ENST00000425430 STARD3NLO95772 234 aa20.45■□□□□ 0.86
HDAC11-210ENST00000425430 VEGFAP15692 232 aaPredicted RBP20.45■□□□□ 0.86
HDAC11-210ENST00000425430 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
HDAC11-210ENST00000425430 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
HDAC11-210ENST00000425430 ZNF622Q969S3 477 aaKnown RBP eCLIP20.44■□□□□ 0.86
HDAC11-210ENST00000425430 A0A087WZG4 1122 aa20.43■□□□□ 0.86
HDAC11-210ENST00000425430 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
HDAC11-210ENST00000425430 CAPN15O75808 1086 aa20.43■□□□□ 0.86
HDAC11-210ENST00000425430 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
HDAC11-210ENST00000425430 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
HDAC11-210ENST00000425430 PCNTO95613 3336 aa20.42■□□□□ 0.86
HDAC11-210ENST00000425430 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
HDAC11-210ENST00000425430 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
HDAC11-210ENST00000425430 TEFQ10587 303 aa20.41■□□□□ 0.86
HDAC11-210ENST00000425430 CCDC24Q8N4L8 307 aa20.41■□□□□ 0.86
HDAC11-210ENST00000425430 SIPA1L3O60292 1781 aaPredicted RBP20.4■□□□□ 0.86
HDAC11-210ENST00000425430 TNS4Q8IZW8 715 aa20.4■□□□□ 0.86
HDAC11-210ENST00000425430 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
HDAC11-210ENST00000425430 HEG1Q9ULI3 1381 aa20.4■□□□□ 0.86
HDAC11-210ENST00000425430 NPHP1O15259 732 aa20.39■□□□□ 0.85
HDAC11-210ENST00000425430 C21orf2O43822 256 aa20.39■□□□□ 0.85
HDAC11-210ENST00000425430 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
HDAC11-210ENST00000425430 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
HDAC11-210ENST00000425430 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
HDAC11-210ENST00000425430 PDE6BP35913 854 aa20.38■□□□□ 0.85
HDAC11-210ENST00000425430 PRR5LQ6MZQ0 368 aa20.38■□□□□ 0.85
HDAC11-210ENST00000425430 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
HDAC11-210ENST00000425430 HSPA1AP0DMV8 641 aaKnown RBP20.37■□□□□ 0.85
HDAC11-210ENST00000425430 HSPA1BP0DMV9 641 aaKnown RBP20.37■□□□□ 0.85
HDAC11-210ENST00000425430 ERFEQ4G0M1 354 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 ZNF790Q6PG37 636 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 NPM2Q86SE8 214 aaKnown RBP20.37■□□□□ 0.85
HDAC11-210ENST00000425430 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 CFAP53Q96M91 514 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
HDAC11-210ENST00000425430 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
HDAC11-210ENST00000425430 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
HDAC11-210ENST00000425430 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
HDAC11-210ENST00000425430 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
HDAC11-210ENST00000425430 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
HDAC11-210ENST00000425430 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
HDAC11-210ENST00000425430 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
HDAC11-210ENST00000425430 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
HDAC11-210ENST00000425430 POTECB2RU33 542 aa20.34■□□□□ 0.85
HDAC11-210ENST00000425430 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
HDAC11-210ENST00000425430 ST5P78524 1137 aa20.34■□□□□ 0.85
HDAC11-210ENST00000425430 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
HDAC11-210ENST00000425430 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms