RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PLEKHF1Q96S99 279 aa28.66■■■□□ 2.18
CDCP1-202ENST00000425231 DCTN1Q14203 1278 aa28.65■■■□□ 2.18
CDCP1-202ENST00000425231 USPL1Q5W0Q7 1092 aa28.65■■■□□ 2.18
CDCP1-202ENST00000425231 COL15A1P39059 1388 aa28.65■■■□□ 2.18
CDCP1-202ENST00000425231 C10orf71Q711Q0 1435 aa28.64■■■□□ 2.18
CDCP1-202ENST00000425231 ZPR1O75312 459 aa28.64■■■□□ 2.18
CDCP1-202ENST00000425231 FMNL2Q96PY5 1086 aa28.64■■■□□ 2.18
CDCP1-202ENST00000425231 TEX13AQ9BXU3 409 aaPredicted RBP28.64■■■□□ 2.18
CDCP1-202ENST00000425231 KIAA1551Q9HCM1 1747 aa28.64■■■□□ 2.17
CDCP1-202ENST00000425231 CANXP27824 592 aaKnown RBP28.63■■■□□ 2.17
CDCP1-202ENST00000425231 TM4SF1P30408 202 aa28.63■■■□□ 2.17
CDCP1-202ENST00000425231 TGFB2P61812 414 aa28.63■■■□□ 2.17
CDCP1-202ENST00000425231 NARFQ9UHQ1 456 aa28.63■■■□□ 2.17
CDCP1-202ENST00000425231 PXDNLA1KZ92 1463 aa28.62■■■□□ 2.17
CDCP1-202ENST00000425231 DDR1Q08345 913 aa28.62■■■□□ 2.17
CDCP1-202ENST00000425231 EIF5P55010 431 aaKnown RBP28.61■■■□□ 2.17
CDCP1-202ENST00000425231 WWC3Q9ULE0 1092 aa28.61■■■□□ 2.17
CDCP1-202ENST00000425231 BCL2L12Q9HB09 334 aa28.6■■■□□ 2.17
CDCP1-202ENST00000425231 N4BP2Q86UW6 1770 aaPredicted RBP28.59■■■□□ 2.17
CDCP1-202ENST00000425231 DLG5Q8TDM6 1919 aa28.59■■■□□ 2.17
CDCP1-202ENST00000425231 A0A0G2JLW4 131 aa28.59■■■□□ 2.17
CDCP1-202ENST00000425231 POLRMTO00411 1230 aaKnown RBP28.59■■■□□ 2.17
CDCP1-202ENST00000425231 NEFMP07197 916 aa28.59■■■□□ 2.17
CDCP1-202ENST00000425231 A1BGP04217 495 aa28.56■■■□□ 2.16
CDCP1-202ENST00000425231 TAF7Q15545 349 aaPredicted RBP28.56■■■□□ 2.16
CDCP1-202ENST00000425231 PNNQ9H307 717 aaKnown RBP28.56■■■□□ 2.16
CDCP1-202ENST00000425231 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
CDCP1-202ENST00000425231 DPEP1P16444 411 aa28.55■■■□□ 2.16
CDCP1-202ENST00000425231 NFIXQ14938 502 aa28.55■■■□□ 2.16
CDCP1-202ENST00000425231 NFE2L2Q16236 605 aa28.55■■■□□ 2.16
CDCP1-202ENST00000425231 MYBBP1AQ9BQG0 1328 aaKnown RBP28.55■■■□□ 2.16
CDCP1-202ENST00000425231 PRAMEF22A3QJZ6 481 aa28.54■■■□□ 2.16
CDCP1-202ENST00000425231 IL6STP40189 918 aaPredicted RBP28.54■■■□□ 2.16
CDCP1-202ENST00000425231 A0A087WZG4 1122 aa28.53■■■□□ 2.16
CDCP1-202ENST00000425231 KCNA3P22001 575 aa28.53■■■□□ 2.16
CDCP1-202ENST00000425231 SNRPA1P09661 255 aaKnown RBP28.52■■■□□ 2.16
CDCP1-202ENST00000425231 MIS18AQ9NYP9 233 aa28.52■■■□□ 2.16
CDCP1-202ENST00000425231 MAPK8IP3Q9UPT6 1336 aa28.51■■■□□ 2.15
CDCP1-202ENST00000425231 BRCA1P38398 1863 aaKnown RBP28.5■■■□□ 2.15
CDCP1-202ENST00000425231 AFDNP55196 1824 aaKnown RBP28.5■■■□□ 2.15
CDCP1-202ENST00000425231 TBC1D2BQ9UPU7 963 aa28.5■■■□□ 2.15
CDCP1-202ENST00000425231 NRXN2Q9P2S2 1712 aa28.49■■■□□ 2.15
CDCP1-202ENST00000425231 BCS1LQ9Y276 419 aa28.49■■■□□ 2.15
CDCP1-202ENST00000425231 ZNF330Q9Y3S2 320 aaPredicted RBP28.49■■■□□ 2.15
CDCP1-202ENST00000425231 THUMPD2Q9BTF0 503 aaKnown RBP28.48■■■□□ 2.15
CDCP1-202ENST00000425231 SERPINB2P05120 415 aa28.47■■■□□ 2.15
CDCP1-202ENST00000425231 PIP4K2AP48426 406 aaPredicted RBP28.46■■■□□ 2.15
CDCP1-202ENST00000425231 PNISRQ8TF01 805 aaKnown RBP28.46■■■□□ 2.15
CDCP1-202ENST00000425231 SCN7AQ01118 1682 aa28.46■■■□□ 2.15
CDCP1-202ENST00000425231 TBC1D9BQ66K14 1250 aa28.45■■■□□ 2.15
CDCP1-202ENST00000425231 KDM3BQ7LBC6 1761 aa28.45■■■□□ 2.14
CDCP1-202ENST00000425231 CHRNA5P30532 468 aa28.44■■■□□ 2.14
CDCP1-202ENST00000425231 BICDL1Q6ZP65 573 aa28.44■■■□□ 2.14
CDCP1-202ENST00000425231 PRKRIP1Q9H875 184 aaPredicted RBP28.44■■■□□ 2.14
CDCP1-202ENST00000425231 PIM2Q9P1W9 311 aa28.44■■■□□ 2.14
CDCP1-202ENST00000425231 CAMTA2O94983 1202 aa28.43■■■□□ 2.14
CDCP1-202ENST00000425231 NPM2Q86SE8 214 aaKnown RBP28.43■■■□□ 2.14
CDCP1-202ENST00000425231 RIPK4P57078 832 aa28.43■■■□□ 2.14
CDCP1-202ENST00000425231 NBPF26B4DH59 902 aa28.42■■■□□ 2.14
CDCP1-202ENST00000425231 ZEB1P37275 1124 aaPredicted RBP28.42■■■□□ 2.14
CDCP1-202ENST00000425231 NBPF10Q6P3W6 841 aaKnown RBP28.42■■■□□ 2.14
CDCP1-202ENST00000425231 DZIP3Q86Y13 1208 aaKnown RBP28.42■■■□□ 2.14
CDCP1-202ENST00000425231 NBPF15Q8N660 670 aa28.42■■■□□ 2.14
CDCP1-202ENST00000425231 ADCY9O60503 1353 aa28.42■■■□□ 2.14
CDCP1-202ENST00000425231 TMPOP42166 694 aaKnown RBP28.41■■■□□ 2.14
CDCP1-202ENST00000425231 EIF4A1P60842 406 aaKnown RBP28.41■■■□□ 2.14
CDCP1-202ENST00000425231 GIGYF1O75420 1035 aaPredicted RBP28.4■■■□□ 2.14
CDCP1-202ENST00000425231 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.14
CDCP1-202ENST00000425231 DALRD3Q5D0E6 543 aaKnown RBP28.39■■■□□ 2.14
CDCP1-202ENST00000425231 BCORQ6W2J9 1755 aa28.39■■■□□ 2.13
CDCP1-202ENST00000425231 ATP10DQ9P241 1426 aa28.39■■■□□ 2.13
CDCP1-202ENST00000425231 CARMIL3Q8ND23 1372 aa28.37■■■□□ 2.13
CDCP1-202ENST00000425231 ARHGAP27Q6ZUM4 889 aa28.37■■■□□ 2.13
CDCP1-202ENST00000425231 CCDC146Q8IYE0 955 aa28.37■■■□□ 2.13
CDCP1-202ENST00000425231 LAMB4A4D0S4 1761 aa28.37■■■□□ 2.13
CDCP1-202ENST00000425231 ADAMTS8Q9UP79 889 aa28.36■■■□□ 2.13
CDCP1-202ENST00000425231 WDR43Q15061 677 aaKnown RBP eCLIP28.35■■■□□ 2.13
CDCP1-202ENST00000425231 CLEC4GQ6UXB4 293 aa28.35■■■□□ 2.13
CDCP1-202ENST00000425231 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
CDCP1-202ENST00000425231 SETDB2Q96T68 719 aa28.35■■■□□ 2.13
CDCP1-202ENST00000425231 RRP7AQ9Y3A4 280 aaKnown RBP28.35■■■□□ 2.13
CDCP1-202ENST00000425231 PRR5LQ6MZQ0 368 aa28.34■■■□□ 2.13
CDCP1-202ENST00000425231 LMOD3Q0VAK6 560 aa28.33■■■□□ 2.13
CDCP1-202ENST00000425231 TSPYL4Q9UJ04 414 aa28.33■■■□□ 2.13
CDCP1-202ENST00000425231 DLEC1Q9Y238 1755 aa28.32■■■□□ 2.12
CDCP1-202ENST00000425231 ANKRD31Q8N7Z5 1873 aa28.32■■■□□ 2.12
CDCP1-202ENST00000425231 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
CDCP1-202ENST00000425231 C2CD5Q86YS7 1000 aa28.31■■■□□ 2.12
CDCP1-202ENST00000425231 CCDC24Q8N4L8 307 aa28.31■■■□□ 2.12
CDCP1-202ENST00000425231 BRIP1Q9BX63 1249 aa28.31■■■□□ 2.12
CDCP1-202ENST00000425231 BABAM1Q9NWV8 329 aa28.31■■■□□ 2.12
CDCP1-202ENST00000425231 H0YIN7 160 aa28.3■■■□□ 2.12
CDCP1-202ENST00000425231 RGL2O15211 777 aa28.3■■■□□ 2.12
CDCP1-202ENST00000425231 C1QTNF8P60827 252 aa28.3■■■□□ 2.12
CDCP1-202ENST00000425231 TRIM35Q9UPQ4 493 aa28.29■■■□□ 2.12
CDCP1-202ENST00000425231 ZNF652Q9Y2D9 606 aa28.29■■■□□ 2.12
CDCP1-202ENST00000425231 CNBD1Q8NA66 436 aa28.28■■■□□ 2.12
CDCP1-202ENST00000425231 GPBP1L1Q9HC44 474 aaPredicted RBP28.28■■■□□ 2.12
CDCP1-202ENST00000425231 PDE6BP35913 854 aa28.27■■■□□ 2.12
CDCP1-202ENST00000425231 TTLL6Q8N841 843 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms