RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SRP68Q9UHB9 627 aaKnown RBP23.66■■□□□ 1.38
IGHV3-47-201ENST00000425060 RIPK4P57078 832 aa23.65■■□□□ 1.38
IGHV3-47-201ENST00000425060 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
IGHV3-47-201ENST00000425060 THUMPD2Q9BTF0 503 aaKnown RBP23.65■■□□□ 1.38
IGHV3-47-201ENST00000425060 CD2APQ9Y5K6 639 aa23.65■■□□□ 1.38
IGHV3-47-201ENST00000425060 MMP10P09238 476 aa23.64■■□□□ 1.37
IGHV3-47-201ENST00000425060 CCDC146Q8IYE0 955 aa23.64■■□□□ 1.37
IGHV3-47-201ENST00000425060 RUNDC1Q96C34 613 aa23.64■■□□□ 1.37
IGHV3-47-201ENST00000425060 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.37
IGHV3-47-201ENST00000425060 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
IGHV3-47-201ENST00000425060 USP16Q9Y5T5 823 aa23.63■■□□□ 1.37
IGHV3-47-201ENST00000425060 COL15A1P39059 1388 aa23.63■■□□□ 1.37
IGHV3-47-201ENST00000425060 PRAMEF22A3QJZ6 481 aa23.62■■□□□ 1.37
IGHV3-47-201ENST00000425060 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
IGHV3-47-201ENST00000425060 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
IGHV3-47-201ENST00000425060 PNISRQ8TF01 805 aaKnown RBP23.62■■□□□ 1.37
IGHV3-47-201ENST00000425060 DCAF8L1A6NGE4 600 aa23.61■■□□□ 1.37
IGHV3-47-201ENST00000425060 SNRPA1P09661 255 aaKnown RBP23.61■■□□□ 1.37
IGHV3-47-201ENST00000425060 FKBP8Q14318 412 aa23.61■■□□□ 1.37
IGHV3-47-201ENST00000425060 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
IGHV3-47-201ENST00000425060 A1BGP04217 495 aa23.6■■□□□ 1.37
IGHV3-47-201ENST00000425060 KDM3BQ7LBC6 1761 aa23.6■■□□□ 1.37
IGHV3-47-201ENST00000425060 IL6STP40189 918 aaPredicted RBP23.59■■□□□ 1.37
IGHV3-47-201ENST00000425060 USPL1Q5W0Q7 1092 aa23.59■■□□□ 1.37
IGHV3-47-201ENST00000425060 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
IGHV3-47-201ENST00000425060 ZPR1O75312 459 aa23.58■■□□□ 1.37
IGHV3-47-201ENST00000425060 TM4SF1P30408 202 aa23.58■■□□□ 1.37
IGHV3-47-201ENST00000425060 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.37
IGHV3-47-201ENST00000425060 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
IGHV3-47-201ENST00000425060 EIF4A1P60842 406 aaKnown RBP23.57■■□□□ 1.36
IGHV3-47-201ENST00000425060 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
IGHV3-47-201ENST00000425060 DDR1Q08345 913 aa23.56■■□□□ 1.36
IGHV3-47-201ENST00000425060 A0A087WZG4 1122 aa23.55■■□□□ 1.36
IGHV3-47-201ENST00000425060 NEUROD2Q15784 382 aa23.55■■□□□ 1.36
IGHV3-47-201ENST00000425060 BABAM1Q9NWV8 329 aa23.55■■□□□ 1.36
IGHV3-47-201ENST00000425060 PARP3Q9Y6F1 533 aa23.55■■□□□ 1.36
IGHV3-47-201ENST00000425060 ANP32CO43423 234 aa23.54■■□□□ 1.36
IGHV3-47-201ENST00000425060 GIGYF1O75420 1035 aaPredicted RBP23.54■■□□□ 1.36
IGHV3-47-201ENST00000425060 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
IGHV3-47-201ENST00000425060 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
IGHV3-47-201ENST00000425060 POLRMTO00411 1230 aaKnown RBP23.53■■□□□ 1.36
IGHV3-47-201ENST00000425060 NBPF26B4DH59 902 aa23.52■■□□□ 1.36
IGHV3-47-201ENST00000425060 NFIXQ14938 502 aa23.52■■□□□ 1.36
IGHV3-47-201ENST00000425060 GPR162Q16538 588 aa23.52■■□□□ 1.36
IGHV3-47-201ENST00000425060 NBPF10Q6P3W6 841 aaKnown RBP23.52■■□□□ 1.36
IGHV3-47-201ENST00000425060 NBPF15Q8N660 670 aa23.52■■□□□ 1.36
IGHV3-47-201ENST00000425060 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.35
IGHV3-47-201ENST00000425060 PIP4K2AP48426 406 aaPredicted RBP23.51■■□□□ 1.35
IGHV3-47-201ENST00000425060 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
IGHV3-47-201ENST00000425060 TBC1D2BQ9UPU7 963 aa23.51■■□□□ 1.35
IGHV3-47-201ENST00000425060 APAF1O14727 1248 aa23.5■■□□□ 1.35
IGHV3-47-201ENST00000425060 CHL1O00533 1208 aa23.49■■□□□ 1.35
IGHV3-47-201ENST00000425060 CAMTA2O94983 1202 aa23.49■■□□□ 1.35
IGHV3-47-201ENST00000425060 TGFB2P61812 414 aa23.49■■□□□ 1.35
IGHV3-47-201ENST00000425060 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
IGHV3-47-201ENST00000425060 KIAA1551Q9HCM1 1747 aa23.49■■□□□ 1.35
IGHV3-47-201ENST00000425060 UTRNP46939 3433 aa23.48■■□□□ 1.35
IGHV3-47-201ENST00000425060 LAMB4A4D0S4 1761 aa23.48■■□□□ 1.35
IGHV3-47-201ENST00000425060 PXDNLA1KZ92 1463 aa23.48■■□□□ 1.35
IGHV3-47-201ENST00000425060 SCN7AQ01118 1682 aa23.47■■□□□ 1.35
IGHV3-47-201ENST00000425060 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
IGHV3-47-201ENST00000425060 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
IGHV3-47-201ENST00000425060 MRS2Q9HD23 443 aa23.46■■□□□ 1.35
IGHV3-47-201ENST00000425060 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
IGHV3-47-201ENST00000425060 SERPINB2P05120 415 aa23.45■■□□□ 1.34
IGHV3-47-201ENST00000425060 TBC1D9BQ66K14 1250 aa23.45■■□□□ 1.34
IGHV3-47-201ENST00000425060 NPM2Q86SE8 214 aaKnown RBP23.45■■□□□ 1.34
IGHV3-47-201ENST00000425060 GOLGB1Q14789 3259 aaKnown RBP23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 A0A0G2JLW4 131 aa23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 GRIN3BO60391 1043 aa23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 KCNA3P22001 575 aa23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 YY1P25490 414 aa23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 AFDNP55196 1824 aaKnown RBP23.44■■□□□ 1.34
IGHV3-47-201ENST00000425060 DPEP1P16444 411 aa23.43■■□□□ 1.34
IGHV3-47-201ENST00000425060 BCORQ6W2J9 1755 aa23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 CLEC4GQ6UXB4 293 aa23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 BICDL1Q6ZP65 573 aa23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 CFAP44Q96MT7 982 aa23.42■■□□□ 1.34
IGHV3-47-201ENST00000425060 RGL2O15211 777 aa23.41■■□□□ 1.34
IGHV3-47-201ENST00000425060 CHD4Q14839 1912 aa23.41■■□□□ 1.34
IGHV3-47-201ENST00000425060 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
IGHV3-47-201ENST00000425060 PDIA6Q15084 440 aa23.4■■□□□ 1.34
IGHV3-47-201ENST00000425060 WWC3Q9ULE0 1092 aa23.4■■□□□ 1.34
IGHV3-47-201ENST00000425060 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
IGHV3-47-201ENST00000425060 LRP10Q7Z4F1 713 aa23.39■■□□□ 1.33
IGHV3-47-201ENST00000425060 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
IGHV3-47-201ENST00000425060 BRCA1P38398 1863 aaKnown RBP23.37■■□□□ 1.33
IGHV3-47-201ENST00000425060 SETDB2Q96T68 719 aa23.37■■□□□ 1.33
IGHV3-47-201ENST00000425060 MBIPQ9NS73 344 aa23.37■■□□□ 1.33
IGHV3-47-201ENST00000425060 CARMIL3Q8ND23 1372 aa23.37■■□□□ 1.33
IGHV3-47-201ENST00000425060 MYL6BP14649 208 aa23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 CHRNA5P30532 468 aa23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 HLFQ16534 295 aa23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 CCDC27Q2M243 656 aa23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 TTLL7Q6ZT98 887 aa23.36■■□□□ 1.33
IGHV3-47-201ENST00000425060 IFT57Q9NWB7 429 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms