RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 KLHL34Q8N239 644 aa29.41■■■□□ 2.3
PTCHD3P2-201ENST00000424937 STARD3NLO95772 234 aa29.4■■■□□ 2.3
PTCHD3P2-201ENST00000424937 LMOD3Q0VAK6 560 aa29.4■■■□□ 2.3
PTCHD3P2-201ENST00000424937 ZBTB1Q9Y2K1 713 aa29.4■■■□□ 2.3
PTCHD3P2-201ENST00000424937 NEUROD2Q15784 382 aa29.39■■■□□ 2.3
PTCHD3P2-201ENST00000424937 MIS18AQ9NYP9 233 aa29.39■■■□□ 2.3
PTCHD3P2-201ENST00000424937 SOS1Q07889 1333 aaPredicted RBP29.39■■■□□ 2.3
PTCHD3P2-201ENST00000424937 TEX13AQ9BXU3 409 aaPredicted RBP29.38■■■□□ 2.29
PTCHD3P2-201ENST00000424937 PNISRQ8TF01 805 aaKnown RBP29.37■■■□□ 2.29
PTCHD3P2-201ENST00000424937 SYT17Q9BSW7 474 aa29.37■■■□□ 2.29
PTCHD3P2-201ENST00000424937 COL15A1P39059 1388 aa29.37■■■□□ 2.29
PTCHD3P2-201ENST00000424937 MRS2Q9HD23 443 aa29.36■■■□□ 2.29
PTCHD3P2-201ENST00000424937 CANXP27824 592 aaKnown RBP29.35■■■□□ 2.29
PTCHD3P2-201ENST00000424937 SRP68Q9UHB9 627 aaKnown RBP29.35■■■□□ 2.29
PTCHD3P2-201ENST00000424937 USP42Q9H9J4 1324 aaKnown RBP29.35■■■□□ 2.29
PTCHD3P2-201ENST00000424937 PRAMEF22A3QJZ6 481 aa29.33■■■□□ 2.29
PTCHD3P2-201ENST00000424937 SNRPA1P09661 255 aaKnown RBP29.33■■■□□ 2.29
PTCHD3P2-201ENST00000424937 GYS1P13807 737 aa29.33■■■□□ 2.29
PTCHD3P2-201ENST00000424937 SCN7AQ01118 1682 aa29.32■■■□□ 2.28
PTCHD3P2-201ENST00000424937 NLGN1Q8N2Q7 840 aa29.31■■■□□ 2.28
PTCHD3P2-201ENST00000424937 MMP10P09238 476 aa29.3■■■□□ 2.28
PTCHD3P2-201ENST00000424937 TRIM35Q9UPQ4 493 aa29.3■■■□□ 2.28
PTCHD3P2-201ENST00000424937 USP16Q9Y5T5 823 aa29.3■■■□□ 2.28
PTCHD3P2-201ENST00000424937 ZPR1O75312 459 aa29.29■■■□□ 2.28
PTCHD3P2-201ENST00000424937 TSPYL4Q9UJ04 414 aa29.29■■■□□ 2.28
PTCHD3P2-201ENST00000424937 ZNF330Q9Y3S2 320 aaPredicted RBP29.29■■■□□ 2.28
PTCHD3P2-201ENST00000424937 BCORQ6W2J9 1755 aa29.29■■■□□ 2.28
PTCHD3P2-201ENST00000424937 APAF1O14727 1248 aa29.28■■■□□ 2.28
PTCHD3P2-201ENST00000424937 A1BGP04217 495 aa29.28■■■□□ 2.28
PTCHD3P2-201ENST00000424937 KIF13BQ9NQT8 1826 aa29.28■■■□□ 2.28
PTCHD3P2-201ENST00000424937 USPL1Q5W0Q7 1092 aa29.27■■■□□ 2.28
PTCHD3P2-201ENST00000424937 EIF5P55010 431 aaKnown RBP29.26■■■□□ 2.27
PTCHD3P2-201ENST00000424937 EIF4A1P60842 406 aaKnown RBP29.26■■■□□ 2.27
PTCHD3P2-201ENST00000424937 IL6STP40189 918 aaPredicted RBP29.25■■■□□ 2.27
PTCHD3P2-201ENST00000424937 PIP4K2AP48426 406 aaPredicted RBP29.25■■■□□ 2.27
PTCHD3P2-201ENST00000424937 FKBP8Q14318 412 aa29.25■■■□□ 2.27
PTCHD3P2-201ENST00000424937 NLGN2Q8NFZ4 835 aa29.25■■■□□ 2.27
PTCHD3P2-201ENST00000424937 NARFQ9UHQ1 456 aa29.25■■■□□ 2.27
PTCHD3P2-201ENST00000424937 A0A087WZG4 1122 aa29.24■■■□□ 2.27
PTCHD3P2-201ENST00000424937 DCAF8L1A6NGE4 600 aa29.24■■■□□ 2.27
PTCHD3P2-201ENST00000424937 AFDNP55196 1824 aaKnown RBP29.24■■■□□ 2.27
PTCHD3P2-201ENST00000424937 NPM2Q86SE8 214 aaKnown RBP29.23■■■□□ 2.27
PTCHD3P2-201ENST00000424937 BABAM1Q9NWV8 329 aa29.22■■■□□ 2.27
PTCHD3P2-201ENST00000424937 LAS1LQ9Y4W2 734 aaKnown RBP29.22■■■□□ 2.27
PTCHD3P2-201ENST00000424937 CD2APQ9Y5K6 639 aa29.22■■■□□ 2.27
PTCHD3P2-201ENST00000424937 PARP3Q9Y6F1 533 aa29.22■■■□□ 2.27
PTCHD3P2-201ENST00000424937 GIGYF1O75420 1035 aaPredicted RBP29.21■■■□□ 2.27
PTCHD3P2-201ENST00000424937 N4BP2Q86UW6 1770 aaPredicted RBP29.2■■■□□ 2.26
PTCHD3P2-201ENST00000424937 KIAA1551Q9HCM1 1747 aa29.2■■■□□ 2.26
PTCHD3P2-201ENST00000424937 TBC1D2BQ9UPU7 963 aa29.19■■■□□ 2.26
PTCHD3P2-201ENST00000424937 C10orf71Q711Q0 1435 aa29.19■■■□□ 2.26
PTCHD3P2-201ENST00000424937 DDR1Q08345 913 aa29.18■■■□□ 2.26
PTCHD3P2-201ENST00000424937 BCL2L12Q9HB09 334 aa29.18■■■□□ 2.26
PTCHD3P2-201ENST00000424937 SENP3-EIF4A1A0A087X0R7 540 aa29.17■■■□□ 2.26
PTCHD3P2-201ENST00000424937 NBPF26B4DH59 902 aa29.17■■■□□ 2.26
PTCHD3P2-201ENST00000424937 NBPF10Q6P3W6 841 aaKnown RBP29.17■■■□□ 2.26
PTCHD3P2-201ENST00000424937 NBPF15Q8N660 670 aa29.17■■■□□ 2.26
PTCHD3P2-201ENST00000424937 NRXN2Q9P2S2 1712 aa29.17■■■□□ 2.26
PTCHD3P2-201ENST00000424937 CHL1O00533 1208 aa29.16■■■□□ 2.26
PTCHD3P2-201ENST00000424937 DZIP3Q86Y13 1208 aaKnown RBP29.16■■■□□ 2.26
PTCHD3P2-201ENST00000424937 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
PTCHD3P2-201ENST00000424937 TM4SF1P30408 202 aa29.14■■■□□ 2.26
PTCHD3P2-201ENST00000424937 NFIXQ14938 502 aa29.14■■■□□ 2.26
PTCHD3P2-201ENST00000424937 POLRMTO00411 1230 aaKnown RBP29.13■■■□□ 2.25
PTCHD3P2-201ENST00000424937 CAMTA2O94983 1202 aa29.13■■■□□ 2.25
PTCHD3P2-201ENST00000424937 CFAP44Q96MT7 982 aa29.13■■■□□ 2.25
PTCHD3P2-201ENST00000424937 CHD4Q14839 1912 aa29.12■■■□□ 2.25
PTCHD3P2-201ENST00000424937 CALD1Q05682 793 aaKnown RBP29.12■■■□□ 2.25
PTCHD3P2-201ENST00000424937 FAM9BQ8IZU0 186 aa29.12■■■□□ 2.25
PTCHD3P2-201ENST00000424937 BRCA1P38398 1863 aaKnown RBP29.11■■■□□ 2.25
PTCHD3P2-201ENST00000424937 GPR162Q16538 588 aa29.11■■■□□ 2.25
PTCHD3P2-201ENST00000424937 BICDL1Q6ZP65 573 aa29.11■■■□□ 2.25
PTCHD3P2-201ENST00000424937 NUP98P52948 1817 aa29.1■■■□□ 2.25
PTCHD3P2-201ENST00000424937 PXDNLA1KZ92 1463 aa29.1■■■□□ 2.25
PTCHD3P2-201ENST00000424937 KRT24Q2M2I5 525 aa29.1■■■□□ 2.25
PTCHD3P2-201ENST00000424937 MYL6BP14649 208 aa29.09■■■□□ 2.25
PTCHD3P2-201ENST00000424937 EIF2S2P20042 333 aaKnown RBP29.09■■■□□ 2.25
PTCHD3P2-201ENST00000424937 TBC1D9BQ66K14 1250 aa29.09■■■□□ 2.25
PTCHD3P2-201ENST00000424937 MBIPQ9NS73 344 aa29.09■■■□□ 2.25
PTCHD3P2-201ENST00000424937 IFT57Q9NWB7 429 aa29.09■■■□□ 2.25
PTCHD3P2-201ENST00000424937 NGEFQ8N5V2 710 aa29.08■■■□□ 2.25
PTCHD3P2-201ENST00000424937 ERBB4Q15303 1308 aa29.08■■■□□ 2.25
PTCHD3P2-201ENST00000424937 GNAI1P63096 354 aa29.07■■■□□ 2.24
PTCHD3P2-201ENST00000424937 ZNF853P0CG23 659 aa29.06■■■□□ 2.24
PTCHD3P2-201ENST00000424937 WWC3Q9ULE0 1092 aa29.06■■■□□ 2.24
PTCHD3P2-201ENST00000424937 CARMIL3Q8ND23 1372 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 SERPINB2P05120 415 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 CCDC27Q2M243 656 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 NECTIN2Q92692 538 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 ZNF652Q9Y2D9 606 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 ANKRD31Q8N7Z5 1873 aa29.05■■■□□ 2.24
PTCHD3P2-201ENST00000424937 YBX3P16989 372 aaKnown RBP eCLIP29.04■■■□□ 2.24
PTCHD3P2-201ENST00000424937 TGFB2P61812 414 aa29.04■■■□□ 2.24
PTCHD3P2-201ENST00000424937 DLEC1Q9Y238 1755 aa29.03■■■□□ 2.24
PTCHD3P2-201ENST00000424937 WWC1Q8IX03 1113 aa29.03■■■□□ 2.24
PTCHD3P2-201ENST00000424937 SALL2Q9Y467 1007 aaPredicted RBP29.02■■■□□ 2.24
PTCHD3P2-201ENST00000424937 GOLGB1Q14789 3259 aaKnown RBP29.02■■■□□ 2.24
PTCHD3P2-201ENST00000424937 A0A0G2JLW4 131 aa29.01■■■□□ 2.23
PTCHD3P2-201ENST00000424937 CLEC4GQ6UXB4 293 aa29.01■■■□□ 2.23
PTCHD3P2-201ENST00000424937 KIF6Q6ZMV9 814 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms