RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 HEG1Q9ULI3 1381 aa24.64■■□□□ 1.53
NUP50-207ENST00000424634 A0A0G2JLW4 131 aa24.63■■□□□ 1.53
NUP50-207ENST00000424634 TGFB2P61812 414 aa24.63■■□□□ 1.53
NUP50-207ENST00000424634 MCM10Q7L590 875 aa24.63■■□□□ 1.53
NUP50-207ENST00000424634 BTBD11A6QL63 1104 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 ZPR1O75312 459 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 STARD3NLO95772 234 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
NUP50-207ENST00000424634 DCTN1Q14203 1278 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 NARFQ9UHQ1 456 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 COL15A1P39059 1388 aa24.62■■□□□ 1.53
NUP50-207ENST00000424634 BCL2L12Q9HB09 334 aa24.61■■□□□ 1.53
NUP50-207ENST00000424634 DPEP1P16444 411 aa24.6■■□□□ 1.53
NUP50-207ENST00000424634 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
NUP50-207ENST00000424634 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
NUP50-207ENST00000424634 FMNL2Q96PY5 1086 aa24.6■■□□□ 1.53
NUP50-207ENST00000424634 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
NUP50-207ENST00000424634 RTF1Q92541 710 aaKnown RBP24.59■■□□□ 1.53
NUP50-207ENST00000424634 TEX13AQ9BXU3 409 aaPredicted RBP24.59■■□□□ 1.53
NUP50-207ENST00000424634 HTATSF1O43719 755 aaKnown RBP24.58■■□□□ 1.53
NUP50-207ENST00000424634 KCNA3P22001 575 aa24.58■■□□□ 1.53
NUP50-207ENST00000424634 PLEKHF1Q96S99 279 aa24.58■■□□□ 1.53
NUP50-207ENST00000424634 NFIXQ14938 502 aa24.57■■□□□ 1.52
NUP50-207ENST00000424634 DLG5Q8TDM6 1919 aa24.57■■□□□ 1.52
NUP50-207ENST00000424634 BRCA1P38398 1863 aaKnown RBP24.56■■□□□ 1.52
NUP50-207ENST00000424634 A1BGP04217 495 aa24.56■■□□□ 1.52
NUP50-207ENST00000424634 USP16Q9Y5T5 823 aa24.55■■□□□ 1.52
NUP50-207ENST00000424634 AFDNP55196 1824 aaKnown RBP24.55■■□□□ 1.52
NUP50-207ENST00000424634 PRAMEF22A3QJZ6 481 aa24.54■■□□□ 1.52
NUP50-207ENST00000424634 RALBP1Q15311 655 aa24.54■■□□□ 1.52
NUP50-207ENST00000424634 BCS1LQ9Y276 419 aa24.54■■□□□ 1.52
NUP50-207ENST00000424634 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
NUP50-207ENST00000424634 MIS18AQ9NYP9 233 aa24.52■■□□□ 1.52
NUP50-207ENST00000424634 A0A087WZG4 1122 aa24.51■■□□□ 1.51
NUP50-207ENST00000424634 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
NUP50-207ENST00000424634 TBC1D2BQ9UPU7 963 aa24.51■■□□□ 1.51
NUP50-207ENST00000424634 NRXN2Q9P2S2 1712 aa24.5■■□□□ 1.51
NUP50-207ENST00000424634 CHRNA5P30532 468 aa24.5■■□□□ 1.51
NUP50-207ENST00000424634 ZNF330Q9Y3S2 320 aaPredicted RBP24.5■■□□□ 1.51
NUP50-207ENST00000424634 SERPINB2P05120 415 aa24.49■■□□□ 1.51
NUP50-207ENST00000424634 NEFMP07197 916 aa24.49■■□□□ 1.51
NUP50-207ENST00000424634 SNRPA1P09661 255 aaKnown RBP24.49■■□□□ 1.51
NUP50-207ENST00000424634 PIP4K2AP48426 406 aaPredicted RBP24.49■■□□□ 1.51
NUP50-207ENST00000424634 NFE2L2Q16236 605 aa24.49■■□□□ 1.51
NUP50-207ENST00000424634 ADCY9O60503 1353 aa24.49■■□□□ 1.51
NUP50-207ENST00000424634 ATP10DQ9P241 1426 aa24.49■■□□□ 1.51
NUP50-207ENST00000424634 TBC1D9BQ66K14 1250 aa24.48■■□□□ 1.51
NUP50-207ENST00000424634 BICDL1Q6ZP65 573 aa24.48■■□□□ 1.51
NUP50-207ENST00000424634 PIM2Q9P1W9 311 aa24.48■■□□□ 1.51
NUP50-207ENST00000424634 THUMPD2Q9BTF0 503 aaKnown RBP24.47■■□□□ 1.51
NUP50-207ENST00000424634 ARHGAP27Q6ZUM4 889 aa24.46■■□□□ 1.51
NUP50-207ENST00000424634 ARFGEF1Q9Y6D6 1849 aa24.46■■□□□ 1.51
NUP50-207ENST00000424634 CAMTA2O94983 1202 aa24.45■■□□□ 1.5
NUP50-207ENST00000424634 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
NUP50-207ENST00000424634 SCN7AQ01118 1682 aa24.45■■□□□ 1.5
NUP50-207ENST00000424634 NBPF26B4DH59 902 aa24.44■■□□□ 1.5
NUP50-207ENST00000424634 C1QTNF8P60827 252 aa24.44■■□□□ 1.5
NUP50-207ENST00000424634 DALRD3Q5D0E6 543 aaKnown RBP24.44■■□□□ 1.5
NUP50-207ENST00000424634 NBPF10Q6P3W6 841 aaKnown RBP24.44■■□□□ 1.5
NUP50-207ENST00000424634 NBPF15Q8N660 670 aa24.44■■□□□ 1.5
NUP50-207ENST00000424634 MYBBP1AQ9BQG0 1328 aaKnown RBP24.43■■□□□ 1.5
NUP50-207ENST00000424634 MAPK8IP3Q9UPT6 1336 aa24.43■■□□□ 1.5
NUP50-207ENST00000424634 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
NUP50-207ENST00000424634 KDM3BQ7LBC6 1761 aa24.42■■□□□ 1.5
NUP50-207ENST00000424634 GIGYF1O75420 1035 aaPredicted RBP24.42■■□□□ 1.5
NUP50-207ENST00000424634 DZIP3Q86Y13 1208 aaKnown RBP24.42■■□□□ 1.5
NUP50-207ENST00000424634 ZNF526Q8TF50 670 aaPredicted RBP24.41■■□□□ 1.5
NUP50-207ENST00000424634 BCORQ6W2J9 1755 aa24.4■■□□□ 1.5
NUP50-207ENST00000424634 NPM2Q86SE8 214 aaKnown RBP24.4■■□□□ 1.5
NUP50-207ENST00000424634 PNISRQ8TF01 805 aaKnown RBP24.4■■□□□ 1.5
NUP50-207ENST00000424634 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.49
NUP50-207ENST00000424634 CCDC24Q8N4L8 307 aa24.39■■□□□ 1.49
NUP50-207ENST00000424634 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.49
NUP50-207ENST00000424634 ANKRD31Q8N7Z5 1873 aa24.38■■□□□ 1.49
NUP50-207ENST00000424634 RIPK4P57078 832 aa24.38■■□□□ 1.49
NUP50-207ENST00000424634 PRR5LQ6MZQ0 368 aa24.38■■□□□ 1.49
NUP50-207ENST00000424634 DLEC1Q9Y238 1755 aa24.37■■□□□ 1.49
NUP50-207ENST00000424634 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
NUP50-207ENST00000424634 SETDB2Q96T68 719 aa24.37■■□□□ 1.49
NUP50-207ENST00000424634 TMPOP42166 694 aaKnown RBP24.36■■□□□ 1.49
NUP50-207ENST00000424634 LAMB4A4D0S4 1761 aa24.35■■□□□ 1.49
NUP50-207ENST00000424634 CLEC4GQ6UXB4 293 aa24.35■■□□□ 1.49
NUP50-207ENST00000424634 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
NUP50-207ENST00000424634 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
NUP50-207ENST00000424634 H0YIN7 160 aa24.34■■□□□ 1.49
NUP50-207ENST00000424634 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
NUP50-207ENST00000424634 SBF1O95248 1867 aa24.34■■□□□ 1.49
NUP50-207ENST00000424634 C9orf131Q5VYM1 1079 aa24.33■■□□□ 1.49
NUP50-207ENST00000424634 TTLL6Q8N841 843 aa24.33■■□□□ 1.49
NUP50-207ENST00000424634 RRP7AQ9Y3A4 280 aaKnown RBP24.33■■□□□ 1.49
NUP50-207ENST00000424634 ADAMTS8Q9UP79 889 aa24.32■■□□□ 1.48
NUP50-207ENST00000424634 HLFQ16534 295 aa24.31■■□□□ 1.48
NUP50-207ENST00000424634 PDE6BP35913 854 aa24.3■■□□□ 1.48
NUP50-207ENST00000424634 NGEFQ8N5V2 710 aa24.3■■□□□ 1.48
NUP50-207ENST00000424634 CNBD1Q8NA66 436 aa24.3■■□□□ 1.48
NUP50-207ENST00000424634 TSPYL4Q9UJ04 414 aa24.3■■□□□ 1.48
NUP50-207ENST00000424634 COL11A2P13942 1736 aaPredicted RBP24.3■■□□□ 1.48
NUP50-207ENST00000424634 NEUROD2Q15784 382 aa24.29■■□□□ 1.48
NUP50-207ENST00000424634 ZNF622Q969S3 477 aaKnown RBP eCLIP24.29■■□□□ 1.48
NUP50-207ENST00000424634 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms