RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 KDM3BQ7LBC6 1761 aa23.65■■□□□ 1.38
SBDSP1-202ENST00000423945 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
SBDSP1-202ENST00000423945 FKBP8Q14318 412 aa23.64■■□□□ 1.37
SBDSP1-202ENST00000423945 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
SBDSP1-202ENST00000423945 NEFMP07197 916 aa23.63■■□□□ 1.37
SBDSP1-202ENST00000423945 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
SBDSP1-202ENST00000423945 PNNQ9H307 717 aaKnown RBP23.63■■□□□ 1.37
SBDSP1-202ENST00000423945 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 STARD3NLO95772 234 aa23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 TAF7Q15545 349 aaPredicted RBP23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 USPL1Q5W0Q7 1092 aa23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 CHD4Q14839 1912 aa23.62■■□□□ 1.37
SBDSP1-202ENST00000423945 YBX3P16989 372 aaKnown RBP eCLIP23.61■■□□□ 1.37
SBDSP1-202ENST00000423945 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
SBDSP1-202ENST00000423945 TEX13AQ9BXU3 409 aaPredicted RBP23.61■■□□□ 1.37
SBDSP1-202ENST00000423945 MIS18AQ9NYP9 233 aa23.61■■□□□ 1.37
SBDSP1-202ENST00000423945 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 DDR1Q08345 913 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 GPR162Q16538 588 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 NARFQ9UHQ1 456 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 USP16Q9Y5T5 823 aa23.6■■□□□ 1.37
SBDSP1-202ENST00000423945 A1BGP04217 495 aa23.59■■□□□ 1.37
SBDSP1-202ENST00000423945 N4BP2Q86UW6 1770 aaPredicted RBP23.59■■□□□ 1.37
SBDSP1-202ENST00000423945 PXDNLA1KZ92 1463 aa23.58■■□□□ 1.37
SBDSP1-202ENST00000423945 TM4SF1P30408 202 aa23.58■■□□□ 1.37
SBDSP1-202ENST00000423945 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
SBDSP1-202ENST00000423945 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.37
SBDSP1-202ENST00000423945 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.37
SBDSP1-202ENST00000423945 SCN7AQ01118 1682 aa23.57■■□□□ 1.36
SBDSP1-202ENST00000423945 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
SBDSP1-202ENST00000423945 ZPR1O75312 459 aa23.57■■□□□ 1.36
SBDSP1-202ENST00000423945 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
SBDSP1-202ENST00000423945 LAMB4A4D0S4 1761 aa23.57■■□□□ 1.36
SBDSP1-202ENST00000423945 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
SBDSP1-202ENST00000423945 RIPK4P57078 832 aa23.56■■□□□ 1.36
SBDSP1-202ENST00000423945 PARP3Q9Y6F1 533 aa23.56■■□□□ 1.36
SBDSP1-202ENST00000423945 NRXN2Q9P2S2 1712 aa23.56■■□□□ 1.36
SBDSP1-202ENST00000423945 POLRMTO00411 1230 aaKnown RBP23.55■■□□□ 1.36
SBDSP1-202ENST00000423945 IL6STP40189 918 aaPredicted RBP23.55■■□□□ 1.36
SBDSP1-202ENST00000423945 WDR43Q15061 677 aaKnown RBP eCLIP23.55■■□□□ 1.36
SBDSP1-202ENST00000423945 RRP7AQ9Y3A4 280 aaKnown RBP23.55■■□□□ 1.36
SBDSP1-202ENST00000423945 BRCA1P38398 1863 aaKnown RBP23.54■■□□□ 1.36
SBDSP1-202ENST00000423945 PIP4K2AP48426 406 aaPredicted RBP23.54■■□□□ 1.36
SBDSP1-202ENST00000423945 BCORQ6W2J9 1755 aa23.54■■□□□ 1.36
SBDSP1-202ENST00000423945 NFIXQ14938 502 aa23.53■■□□□ 1.36
SBDSP1-202ENST00000423945 CCDC184Q52MB2 194 aa23.53■■□□□ 1.36
SBDSP1-202ENST00000423945 PNISRQ8TF01 805 aaKnown RBP23.53■■□□□ 1.36
SBDSP1-202ENST00000423945 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
SBDSP1-202ENST00000423945 WWC3Q9ULE0 1092 aa23.53■■□□□ 1.36
SBDSP1-202ENST00000423945 EIF4A1P60842 406 aaKnown RBP23.52■■□□□ 1.36
SBDSP1-202ENST00000423945 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
SBDSP1-202ENST00000423945 A0A087WZG4 1122 aa23.51■■□□□ 1.35
SBDSP1-202ENST00000423945 NBPF26B4DH59 902 aa23.51■■□□□ 1.35
SBDSP1-202ENST00000423945 NBPF10Q6P3W6 841 aaKnown RBP23.51■■□□□ 1.35
SBDSP1-202ENST00000423945 NBPF15Q8N660 670 aa23.51■■□□□ 1.35
SBDSP1-202ENST00000423945 TGFB2P61812 414 aa23.5■■□□□ 1.35
SBDSP1-202ENST00000423945 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
SBDSP1-202ENST00000423945 ZNF330Q9Y3S2 320 aaPredicted RBP23.5■■□□□ 1.35
SBDSP1-202ENST00000423945 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
SBDSP1-202ENST00000423945 GIGYF1O75420 1035 aaPredicted RBP23.49■■□□□ 1.35
SBDSP1-202ENST00000423945 NEUROD2Q15784 382 aa23.49■■□□□ 1.35
SBDSP1-202ENST00000423945 CAMTA2O94983 1202 aa23.48■■□□□ 1.35
SBDSP1-202ENST00000423945 DPEP1P16444 411 aa23.48■■□□□ 1.35
SBDSP1-202ENST00000423945 KCNA3P22001 575 aa23.48■■□□□ 1.35
SBDSP1-202ENST00000423945 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
SBDSP1-202ENST00000423945 TBC1D9BQ66K14 1250 aa23.47■■□□□ 1.35
SBDSP1-202ENST00000423945 LMOD3Q0VAK6 560 aa23.46■■□□□ 1.35
SBDSP1-202ENST00000423945 SERPINB2P05120 415 aa23.45■■□□□ 1.34
SBDSP1-202ENST00000423945 BICDL1Q6ZP65 573 aa23.45■■□□□ 1.34
SBDSP1-202ENST00000423945 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
SBDSP1-202ENST00000423945 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
SBDSP1-202ENST00000423945 CARMIL3Q8ND23 1372 aa23.44■■□□□ 1.34
SBDSP1-202ENST00000423945 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
SBDSP1-202ENST00000423945 BABAM1Q9NWV8 329 aa23.43■■□□□ 1.34
SBDSP1-202ENST00000423945 CHRNA5P30532 468 aa23.42■■□□□ 1.34
SBDSP1-202ENST00000423945 ARFGEF1Q9Y6D6 1849 aa23.42■■□□□ 1.34
SBDSP1-202ENST00000423945 DLEC1Q9Y238 1755 aa23.42■■□□□ 1.34
SBDSP1-202ENST00000423945 CHL1O00533 1208 aa23.4■■□□□ 1.34
SBDSP1-202ENST00000423945 APAF1O14727 1248 aa23.4■■□□□ 1.34
SBDSP1-202ENST00000423945 ZNF784Q8NCA9 323 aaPredicted RBP23.4■■□□□ 1.34
SBDSP1-202ENST00000423945 NPM2Q86SE8 214 aaKnown RBP23.39■■□□□ 1.33
SBDSP1-202ENST00000423945 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
SBDSP1-202ENST00000423945 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
SBDSP1-202ENST00000423945 PRR5LQ6MZQ0 368 aa23.37■■□□□ 1.33
SBDSP1-202ENST00000423945 LRP10Q7Z4F1 713 aa23.37■■□□□ 1.33
SBDSP1-202ENST00000423945 NUP98P52948 1817 aa23.37■■□□□ 1.33
SBDSP1-202ENST00000423945 COL11A2P13942 1736 aaPredicted RBP23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 ANP32CO43423 234 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 PDIA6Q15084 440 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 HLFQ16534 295 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 PIM2Q9P1W9 311 aa23.36■■□□□ 1.33
SBDSP1-202ENST00000423945 MYL6BP14649 208 aa23.35■■□□□ 1.33
SBDSP1-202ENST00000423945 TTLL7Q6ZT98 887 aa23.35■■□□□ 1.33
SBDSP1-202ENST00000423945 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
SBDSP1-202ENST00000423945 RGL2O15211 777 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms