RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 DDR1Q08345 913 aa12.35□□□□□ -0.43
NUP50-206ENST00000422489 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
NUP50-206ENST00000422489 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
NUP50-206ENST00000422489 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
NUP50-206ENST00000422489 A0A087WZG4 1122 aa12.34□□□□□ -0.43
NUP50-206ENST00000422489 A1BGP04217 495 aa12.34□□□□□ -0.43
NUP50-206ENST00000422489 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
NUP50-206ENST00000422489 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
NUP50-206ENST00000422489 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
NUP50-206ENST00000422489 TBC1D2BQ9UPU7 963 aa12.33□□□□□ -0.44
NUP50-206ENST00000422489 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
NUP50-206ENST00000422489 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
NUP50-206ENST00000422489 SERPINB2P05120 415 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
NUP50-206ENST00000422489 NFIXQ14938 502 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
NUP50-206ENST00000422489 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
NUP50-206ENST00000422489 COL15A1P39059 1388 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
NUP50-206ENST00000422489 CHRNA5P30532 468 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 RALBP1Q15311 655 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
NUP50-206ENST00000422489 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 MRC1P22897 1456 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 ZNF831Q5JPB2 1677 aa12.31□□□□□ -0.44
NUP50-206ENST00000422489 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
NUP50-206ENST00000422489 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
NUP50-206ENST00000422489 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
NUP50-206ENST00000422489 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
NUP50-206ENST00000422489 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
NUP50-206ENST00000422489 KCNA3P22001 575 aa12.3□□□□□ -0.44
NUP50-206ENST00000422489 IL6STP40189 918 aaPredicted RBP12.3□□□□□ -0.44
NUP50-206ENST00000422489 PIP4K2AP48426 406 aaPredicted RBP12.3□□□□□ -0.44
NUP50-206ENST00000422489 DALRD3Q5D0E6 543 aaKnown RBP12.3□□□□□ -0.44
NUP50-206ENST00000422489 MAPK8IP3Q9UPT6 1336 aa12.3□□□□□ -0.44
NUP50-206ENST00000422489 PXDNLA1KZ92 1463 aa12.29□□□□□ -0.44
NUP50-206ENST00000422489 C1QTNF8P60827 252 aa12.29□□□□□ -0.44
NUP50-206ENST00000422489 CACNB1Q02641 598 aaPredicted RBP12.29□□□□□ -0.44
NUP50-206ENST00000422489 NFE2L2Q16236 605 aa12.29□□□□□ -0.44
NUP50-206ENST00000422489 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 TJP1Q07157 1748 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
NUP50-206ENST00000422489 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
NUP50-206ENST00000422489 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
NUP50-206ENST00000422489 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
NUP50-206ENST00000422489 NPHP1O15259 732 aa12.27□□□□□ -0.45
NUP50-206ENST00000422489 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
NUP50-206ENST00000422489 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
NUP50-206ENST00000422489 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
NUP50-206ENST00000422489 H0YIN7 160 aa12.26□□□□□ -0.45
NUP50-206ENST00000422489 RIPK4P57078 832 aa12.26□□□□□ -0.45
NUP50-206ENST00000422489 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
NUP50-206ENST00000422489 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
NUP50-206ENST00000422489 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
NUP50-206ENST00000422489 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
NUP50-206ENST00000422489 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
NUP50-206ENST00000422489 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
NUP50-206ENST00000422489 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
NUP50-206ENST00000422489 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.45
NUP50-206ENST00000422489 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
NUP50-206ENST00000422489 C9orf131Q5VYM1 1079 aa12.24□□□□□ -0.45
NUP50-206ENST00000422489 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
NUP50-206ENST00000422489 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
NUP50-206ENST00000422489 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
NUP50-206ENST00000422489 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
NUP50-206ENST00000422489 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 NBPF10Q6P3W6 841 aaKnown RBP12.23□□□□□ -0.45
NUP50-206ENST00000422489 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 BRIP1Q9BX63 1249 aa12.23□□□□□ -0.45
NUP50-206ENST00000422489 MYL6BP14649 208 aa12.22□□□□□ -0.45
NUP50-206ENST00000422489 PDE6BP35913 854 aa12.22□□□□□ -0.45
NUP50-206ENST00000422489 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
NUP50-206ENST00000422489 RNF181Q9P0P0 153 aa12.22□□□□□ -0.45
NUP50-206ENST00000422489 TSPYL4Q9UJ04 414 aa12.22□□□□□ -0.45
NUP50-206ENST00000422489 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
NUP50-206ENST00000422489 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
NUP50-206ENST00000422489 ST5P78524 1137 aa12.21□□□□□ -0.45
NUP50-206ENST00000422489 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.45
NUP50-206ENST00000422489 CNBD1Q8NA66 436 aa12.21□□□□□ -0.45
NUP50-206ENST00000422489 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.45
NUP50-206ENST00000422489 CHD4Q14839 1912 aa12.21□□□□□ -0.46
NUP50-206ENST00000422489 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
NUP50-206ENST00000422489 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
NUP50-206ENST00000422489 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
NUP50-206ENST00000422489 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
NUP50-206ENST00000422489 NIP7Q9Y221 180 aaKnown RBP eCLIP12.2□□□□□ -0.46
NUP50-206ENST00000422489 N4BP2Q86UW6 1770 aaPredicted RBP12.2□□□□□ -0.46
NUP50-206ENST00000422489 ADCY9O60503 1353 aa12.19□□□□□ -0.46
NUP50-206ENST00000422489 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms