RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 C4AP0C0L4 1744 aa24.28■■□□□ 1.48
DDR1-233ENST00000421124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
DDR1-233ENST00000421124 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
DDR1-233ENST00000421124 INTS5Q6P9B9 1019 aaKnown RBP24.28■■□□□ 1.48
DDR1-233ENST00000421124 SMIM5Q71RC9 77 aa24.28■■□□□ 1.48
DDR1-233ENST00000421124 SLC16A10Q8TF71 515 aa24.28■■□□□ 1.48
DDR1-233ENST00000421124 CHL1O00533 1208 aa24.27■■□□□ 1.48
DDR1-233ENST00000421124 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
DDR1-233ENST00000421124 WWC1Q8IX03 1113 aa24.26■■□□□ 1.47
DDR1-233ENST00000421124 CFAP44Q96MT7 982 aa24.26■■□□□ 1.47
DDR1-233ENST00000421124 MTFR1LQ9H019 292 aa24.26■■□□□ 1.47
DDR1-233ENST00000421124 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
DDR1-233ENST00000421124 PRAMEF22A3QJZ6 481 aa24.25■■□□□ 1.47
DDR1-233ENST00000421124 ADRA2BP18089 450 aa24.25■■□□□ 1.47
DDR1-233ENST00000421124 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
DDR1-233ENST00000421124 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
DDR1-233ENST00000421124 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
DDR1-233ENST00000421124 IFT57Q9NWB7 429 aa24.24■■□□□ 1.47
DDR1-233ENST00000421124 ZBTB1Q9Y2K1 713 aa24.24■■□□□ 1.47
DDR1-233ENST00000421124 SALL2Q9Y467 1007 aaPredicted RBP24.24■■□□□ 1.47
DDR1-233ENST00000421124 USP16Q9Y5T5 823 aa24.24■■□□□ 1.47
DDR1-233ENST00000421124 GIGYF1O75420 1035 aaPredicted RBP24.23■■□□□ 1.47
DDR1-233ENST00000421124 ZNF853P0CG23 659 aa24.23■■□□□ 1.47
DDR1-233ENST00000421124 GNAI1P63096 354 aa24.23■■□□□ 1.47
DDR1-233ENST00000421124 ATF5Q9Y2D1 282 aaPredicted RBP24.23■■□□□ 1.47
DDR1-233ENST00000421124 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
DDR1-233ENST00000421124 ARHGEF1Q92888 912 aaKnown RBP24.22■■□□□ 1.47
DDR1-233ENST00000421124 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
DDR1-233ENST00000421124 IL16Q14005 1332 aa24.2■■□□□ 1.46
DDR1-233ENST00000421124 A1BGP04217 495 aa24.2■■□□□ 1.46
DDR1-233ENST00000421124 MBIPQ9NS73 344 aa24.2■■□□□ 1.46
DDR1-233ENST00000421124 COL15A1P39059 1388 aa24.19■■□□□ 1.46
DDR1-233ENST00000421124 RFC4P35249 363 aa24.19■■□□□ 1.46
DDR1-233ENST00000421124 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
DDR1-233ENST00000421124 PTGER2P43116 358 aa24.17■■□□□ 1.46
DDR1-233ENST00000421124 EIF5P55010 431 aaKnown RBP24.17■■□□□ 1.46
DDR1-233ENST00000421124 IL6STP40189 918 aaPredicted RBP24.16■■□□□ 1.46
DDR1-233ENST00000421124 MSL1Q68DK7 614 aa24.16■■□□□ 1.46
DDR1-233ENST00000421124 KRT24Q2M2I5 525 aa24.15■■□□□ 1.46
DDR1-233ENST00000421124 SGIP1Q9BQI5 828 aa24.15■■□□□ 1.46
DDR1-233ENST00000421124 USP42Q9H9J4 1324 aaKnown RBP24.14■■□□□ 1.46
DDR1-233ENST00000421124 POLD1P28340 1107 aa24.14■■□□□ 1.45
DDR1-233ENST00000421124 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.45
DDR1-233ENST00000421124 NPM2Q86SE8 214 aaKnown RBP24.14■■□□□ 1.45
DDR1-233ENST00000421124 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
DDR1-233ENST00000421124 A0A087WZG4 1122 aa24.13■■□□□ 1.45
DDR1-233ENST00000421124 SRP68Q9UHB9 627 aaKnown RBP24.13■■□□□ 1.45
DDR1-233ENST00000421124 SCN7AQ01118 1682 aa24.13■■□□□ 1.45
DDR1-233ENST00000421124 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
DDR1-233ENST00000421124 ZPR1O75312 459 aa24.12■■□□□ 1.45
DDR1-233ENST00000421124 HOXB7P09629 217 aa24.12■■□□□ 1.45
DDR1-233ENST00000421124 GYS1P13807 737 aa24.12■■□□□ 1.45
DDR1-233ENST00000421124 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
DDR1-233ENST00000421124 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
DDR1-233ENST00000421124 TSR2Q969E8 191 aaKnown RBP24.12■■□□□ 1.45
DDR1-233ENST00000421124 PPP1R1BQ9UD71 204 aaPredicted RBP24.12■■□□□ 1.45
DDR1-233ENST00000421124 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
DDR1-233ENST00000421124 ZNF521Q96K83 1311 aa24.11■■□□□ 1.45
DDR1-233ENST00000421124 BCORQ6W2J9 1755 aa24.11■■□□□ 1.45
DDR1-233ENST00000421124 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
DDR1-233ENST00000421124 NARFQ9UHQ1 456 aa24.11■■□□□ 1.45
DDR1-233ENST00000421124 DUSP27Q5VZP5 1158 aa24.1■■□□□ 1.45
DDR1-233ENST00000421124 NLGN1Q8N2Q7 840 aa24.1■■□□□ 1.45
DDR1-233ENST00000421124 USPL1Q5W0Q7 1092 aa24.09■■□□□ 1.45
DDR1-233ENST00000421124 ARXQ96QS3 562 aa24.09■■□□□ 1.45
DDR1-233ENST00000421124 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
DDR1-233ENST00000421124 HDGFL1Q5TGJ6 251 aa24.07■■□□□ 1.44
DDR1-233ENST00000421124 DZIP3Q86Y13 1208 aaKnown RBP24.07■■□□□ 1.44
DDR1-233ENST00000421124 C8orf58Q8NAV2 365 aa24.07■■□□□ 1.44
DDR1-233ENST00000421124 NECTIN2Q92692 538 aa24.07■■□□□ 1.44
DDR1-233ENST00000421124 TBC1D2BQ9UPU7 963 aa24.07■■□□□ 1.44
DDR1-233ENST00000421124 ELL2O00472 640 aaPredicted RBP24.06■■□□□ 1.44
DDR1-233ENST00000421124 MYL6BP14649 208 aa24.06■■□□□ 1.44
DDR1-233ENST00000421124 FKBP8Q14318 412 aa24.06■■□□□ 1.44
DDR1-233ENST00000421124 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
DDR1-233ENST00000421124 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
DDR1-233ENST00000421124 MMP10P09238 476 aa24.04■■□□□ 1.44
DDR1-233ENST00000421124 GOLGA2Q08379 1002 aa24.04■■□□□ 1.44
DDR1-233ENST00000421124 PDIA6Q15084 440 aa24.04■■□□□ 1.44
DDR1-233ENST00000421124 BCL2L12Q9HB09 334 aa24.04■■□□□ 1.44
DDR1-233ENST00000421124 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
DDR1-233ENST00000421124 TSPYL6Q8N831 410 aa24.03■■□□□ 1.44
DDR1-233ENST00000421124 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
DDR1-233ENST00000421124 NUP98P52948 1817 aa24.03■■□□□ 1.44
DDR1-233ENST00000421124 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
DDR1-233ENST00000421124 CHMP4AQ9BY43 222 aa24.02■■□□□ 1.44
DDR1-233ENST00000421124 CHPF2Q9P2E5 772 aa24.02■■□□□ 1.44
DDR1-233ENST00000421124 ANXA1P04083 346 aa24.01■■□□□ 1.43
DDR1-233ENST00000421124 TWISTNBQ3B726 338 aaPredicted RBP24.01■■□□□ 1.43
DDR1-233ENST00000421124 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
DDR1-233ENST00000421124 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
DDR1-233ENST00000421124 PARP3Q9Y6F1 533 aa24.01■■□□□ 1.43
DDR1-233ENST00000421124 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
DDR1-233ENST00000421124 E9PSI1 815 aa23.99■■□□□ 1.43
DDR1-233ENST00000421124 TM4SF1P30408 202 aa23.99■■□□□ 1.43
DDR1-233ENST00000421124 EXOSC9Q06265 439 aaKnown RBP23.99■■□□□ 1.43
DDR1-233ENST00000421124 KIF6Q6ZMV9 814 aa23.99■■□□□ 1.43
DDR1-233ENST00000421124 TTLL7Q6ZT98 887 aa23.99■■□□□ 1.43
DDR1-233ENST00000421124 FHDC1Q9C0D6 1143 aaPredicted RBP23.99■■□□□ 1.43
DDR1-233ENST00000421124 ZNF652Q9Y2D9 606 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms