RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
VAT1-202ENST00000420567 SOS1Q07889 1333 aaPredicted RBP20.84■□□□□ 0.93
VAT1-202ENST00000420567 APAF1O14727 1248 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 STARD3NLO95772 234 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 RFC4P35249 363 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 KLHL34Q8N239 644 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
VAT1-202ENST00000420567 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 COL24A1Q17RW2 1714 aa20.84■□□□□ 0.93
VAT1-202ENST00000420567 SRP68Q9UHB9 627 aaKnown RBP20.83■□□□□ 0.93
VAT1-202ENST00000420567 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
VAT1-202ENST00000420567 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
VAT1-202ENST00000420567 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
VAT1-202ENST00000420567 MYH14Q7Z406 1995 aaKnown RBP20.82■□□□□ 0.92
VAT1-202ENST00000420567 COL15A1P39059 1388 aa20.82■□□□□ 0.92
VAT1-202ENST00000420567 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
VAT1-202ENST00000420567 TSPYL4Q9UJ04 414 aa20.81■□□□□ 0.92
VAT1-202ENST00000420567 KDM3BQ7LBC6 1761 aa20.81■□□□□ 0.92
VAT1-202ENST00000420567 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
VAT1-202ENST00000420567 A1BGP04217 495 aa20.8■□□□□ 0.92
VAT1-202ENST00000420567 GYS1P13807 737 aa20.8■□□□□ 0.92
VAT1-202ENST00000420567 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
VAT1-202ENST00000420567 USP42Q9H9J4 1324 aaKnown RBP20.79■□□□□ 0.92
VAT1-202ENST00000420567 PIP4K2AP48426 406 aaPredicted RBP20.79■□□□□ 0.92
VAT1-202ENST00000420567 EIF4A1P60842 406 aaKnown RBP20.79■□□□□ 0.92
VAT1-202ENST00000420567 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
VAT1-202ENST00000420567 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
VAT1-202ENST00000420567 MMP10P09238 476 aa20.77■□□□□ 0.92
VAT1-202ENST00000420567 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
VAT1-202ENST00000420567 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
VAT1-202ENST00000420567 EIF5P55010 431 aaKnown RBP20.76■□□□□ 0.91
VAT1-202ENST00000420567 FKBP8Q14318 412 aa20.76■□□□□ 0.91
VAT1-202ENST00000420567 ZPR1O75312 459 aa20.75■□□□□ 0.91
VAT1-202ENST00000420567 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
VAT1-202ENST00000420567 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
VAT1-202ENST00000420567 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
VAT1-202ENST00000420567 BABAM1Q9NWV8 329 aa20.74■□□□□ 0.91
VAT1-202ENST00000420567 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
VAT1-202ENST00000420567 A0A087WZG4 1122 aa20.73■□□□□ 0.91
VAT1-202ENST00000420567 CHL1O00533 1208 aa20.73■□□□□ 0.91
VAT1-202ENST00000420567 NLGN2Q8NFZ4 835 aa20.73■□□□□ 0.91
VAT1-202ENST00000420567 NBPF26B4DH59 902 aa20.72■□□□□ 0.91
VAT1-202ENST00000420567 NBPF10Q6P3W6 841 aaKnown RBP20.72■□□□□ 0.91
VAT1-202ENST00000420567 NBPF15Q8N660 670 aa20.72■□□□□ 0.91
VAT1-202ENST00000420567 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
VAT1-202ENST00000420567 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
VAT1-202ENST00000420567 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
VAT1-202ENST00000420567 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
VAT1-202ENST00000420567 DDR1Q08345 913 aa20.7■□□□□ 0.9
VAT1-202ENST00000420567 KRT24Q2M2I5 525 aa20.7■□□□□ 0.9
VAT1-202ENST00000420567 CFAP44Q96MT7 982 aa20.7■□□□□ 0.9
VAT1-202ENST00000420567 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
VAT1-202ENST00000420567 DZIP3Q86Y13 1208 aaKnown RBP20.69■□□□□ 0.9
VAT1-202ENST00000420567 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
VAT1-202ENST00000420567 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
VAT1-202ENST00000420567 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
VAT1-202ENST00000420567 CD2APQ9Y5K6 639 aa20.68■□□□□ 0.9
VAT1-202ENST00000420567 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
VAT1-202ENST00000420567 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
VAT1-202ENST00000420567 NFIXQ14938 502 aa20.67■□□□□ 0.9
VAT1-202ENST00000420567 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
VAT1-202ENST00000420567 POLRMTO00411 1230 aaKnown RBP20.66■□□□□ 0.9
VAT1-202ENST00000420567 CAMTA2O94983 1202 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 MYL6BP14649 208 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 TM4SF1P30408 202 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 GNAI1P63096 354 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
VAT1-202ENST00000420567 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
VAT1-202ENST00000420567 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
VAT1-202ENST00000420567 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
VAT1-202ENST00000420567 NECTIN2Q92692 538 aa20.65■□□□□ 0.9
VAT1-202ENST00000420567 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
VAT1-202ENST00000420567 TBC1D9BQ66K14 1250 aa20.64■□□□□ 0.89
VAT1-202ENST00000420567 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
VAT1-202ENST00000420567 ERBB4Q15303 1308 aa20.62■□□□□ 0.89
VAT1-202ENST00000420567 ANXA1P04083 346 aa20.62■□□□□ 0.89
VAT1-202ENST00000420567 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
VAT1-202ENST00000420567 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
VAT1-202ENST00000420567 PDIA6Q15084 440 aa20.61■□□□□ 0.89
VAT1-202ENST00000420567 PROSER3Q2NL68 480 aa20.61■□□□□ 0.89
VAT1-202ENST00000420567 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
VAT1-202ENST00000420567 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
VAT1-202ENST00000420567 BCORQ6W2J9 1755 aa20.61■□□□□ 0.89
VAT1-202ENST00000420567 SERPINB2P05120 415 aa20.6■□□□□ 0.89
VAT1-202ENST00000420567 GPR162Q16538 588 aa20.6■□□□□ 0.89
VAT1-202ENST00000420567 HDGFL1Q5TGJ6 251 aa20.6■□□□□ 0.89
VAT1-202ENST00000420567 TTLL7Q6ZT98 887 aa20.6■□□□□ 0.89
VAT1-202ENST00000420567 PXDNLA1KZ92 1463 aa20.6■□□□□ 0.89
VAT1-202ENST00000420567 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
VAT1-202ENST00000420567 HLFQ16534 295 aa20.59■□□□□ 0.89
VAT1-202ENST00000420567 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
VAT1-202ENST00000420567 ZNF652Q9Y2D9 606 aa20.59■□□□□ 0.89
VAT1-202ENST00000420567 HOXB7P09629 217 aa20.58■□□□□ 0.89
VAT1-202ENST00000420567 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.89
VAT1-202ENST00000420567 LRP10Q7Z4F1 713 aa20.58■□□□□ 0.89
VAT1-202ENST00000420567 ZBTB3Q9H5J0 574 aa20.58■□□□□ 0.89
VAT1-202ENST00000420567 CARMIL3Q8ND23 1372 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms