RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 SMIM5Q71RC9 77 aa35.22■■■■□ 3.23
FAAP20-207ENST00000420515 ELL2O00472 640 aaPredicted RBP35.22■■■■□ 3.23
FAAP20-207ENST00000420515 CRKLP46109 303 aaKnown RBP35.22■■■■□ 3.23
FAAP20-207ENST00000420515 E9PSI1 815 aa35.21■■■■□ 3.23
FAAP20-207ENST00000420515 MYH16Q9H6N6 1097 aa35.21■■■■□ 3.23
FAAP20-207ENST00000420515 QSER1Q2KHR3 1735 aa35.21■■■■□ 3.23
FAAP20-207ENST00000420515 EXOSC9Q06265 439 aaKnown RBP35.19■■■■□ 3.22
FAAP20-207ENST00000420515 DUSP27Q5VZP5 1158 aa35.19■■■■□ 3.22
FAAP20-207ENST00000420515 INTS5Q6P9B9 1019 aaKnown RBP35.19■■■■□ 3.22
FAAP20-207ENST00000420515 TRMT2AQ8IZ69 625 aaKnown RBP35.19■■■■□ 3.22
FAAP20-207ENST00000420515 CNTNAP4Q9C0A0 1308 aa35.19■■■■□ 3.22
FAAP20-207ENST00000420515 PIP4K2AP48426 406 aaPredicted RBP35.18■■■■□ 3.22
FAAP20-207ENST00000420515 ZBTB1Q9Y2K1 713 aa35.18■■■■□ 3.22
FAAP20-207ENST00000420515 A1BGP04217 495 aa35.17■■■■□ 3.22
FAAP20-207ENST00000420515 SLC15A2Q16348 729 aa35.16■■■■□ 3.22
FAAP20-207ENST00000420515 TEX13AQ9BXU3 409 aaPredicted RBP35.16■■■■□ 3.22
FAAP20-207ENST00000420515 C4AP0C0L4 1744 aa35.16■■■■□ 3.22
FAAP20-207ENST00000420515 NECTIN2Q92692 538 aa35.16■■■■□ 3.22
FAAP20-207ENST00000420515 STARD3NLO95772 234 aa35.15■■■■□ 3.22
FAAP20-207ENST00000420515 EIF2S2P20042 333 aaKnown RBP35.15■■■■□ 3.22
FAAP20-207ENST00000420515 AK7Q96M32 723 aa35.15■■■■□ 3.22
FAAP20-207ENST00000420515 CCDC87Q9NVE4 849 aa35.15■■■■□ 3.22
FAAP20-207ENST00000420515 STK32BQ9NY57 414 aa35.15■■■■□ 3.22
FAAP20-207ENST00000420515 GNPATO15228 680 aa35.14■■■■□ 3.22
FAAP20-207ENST00000420515 RC3H1Q5TC82 1133 aaKnown RBP35.13■■■■□ 3.21
FAAP20-207ENST00000420515 NBPF14Q5TI25 921 aa35.12■■■■□ 3.21
FAAP20-207ENST00000420515 CANXP27824 592 aaKnown RBP35.11■■■■□ 3.21
FAAP20-207ENST00000420515 TWISTNBQ3B726 338 aaPredicted RBP35.11■■■■□ 3.21
FAAP20-207ENST00000420515 NBPF26B4DH59 902 aa35.11■■■■□ 3.21
FAAP20-207ENST00000420515 NBPF10Q6P3W6 841 aaKnown RBP35.11■■■■□ 3.21
FAAP20-207ENST00000420515 NBPF15Q8N660 670 aa35.11■■■■□ 3.21
FAAP20-207ENST00000420515 TFCP2L1Q9NZI6 479 aa35.11■■■■□ 3.21
FAAP20-207ENST00000420515 HOXB7P09629 217 aa35.1■■■■□ 3.21
FAAP20-207ENST00000420515 R3HDM1Q15032 1099 aaKnown RBP35.1■■■■□ 3.21
FAAP20-207ENST00000420515 CASZ1Q86V15 1759 aa35.1■■■■□ 3.21
FAAP20-207ENST00000420515 PNPLA7Q6ZV29 1317 aa35.09■■■■□ 3.21
FAAP20-207ENST00000420515 PSDA5PKW4 1024 aaPredicted RBP35.09■■■■□ 3.21
FAAP20-207ENST00000420515 PHF14O94880 888 aa35.09■■■■□ 3.21
FAAP20-207ENST00000420515 PDGFDQ9GZP0 370 aaPredicted RBP35.09■■■■□ 3.21
FAAP20-207ENST00000420515 HDGFL1Q5TGJ6 251 aa35.08■■■■□ 3.21
FAAP20-207ENST00000420515 RPS6KA4O75676 772 aa35.07■■■■□ 3.21
FAAP20-207ENST00000420515 ANXA1P04083 346 aa35.07■■■■□ 3.21
FAAP20-207ENST00000420515 PROSER3Q2NL68 480 aa35.07■■■■□ 3.21
FAAP20-207ENST00000420515 SOS1Q07889 1333 aaPredicted RBP35.07■■■■□ 3.2
FAAP20-207ENST00000420515 VAMP4O75379 141 aa35.06■■■■□ 3.2
FAAP20-207ENST00000420515 PDIA6Q15084 440 aa35.06■■■■□ 3.2
FAAP20-207ENST00000420515 RTCBQ9Y3I0 505 aaKnown RBP35.05■■■■□ 3.2
FAAP20-207ENST00000420515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.04■■■■□ 3.2
FAAP20-207ENST00000420515 TCERG1O14776 1098 aaKnown RBP35.04■■■■□ 3.2
FAAP20-207ENST00000420515 CHPF2Q9P2E5 772 aa35.04■■■■□ 3.2
FAAP20-207ENST00000420515 COL23A1Q86Y22 540 aaPredicted RBP35.03■■■■□ 3.2
FAAP20-207ENST00000420515 ZNF330Q9Y3S2 320 aaPredicted RBP35.03■■■■□ 3.2
FAAP20-207ENST00000420515 COL15A1P39059 1388 aa35.03■■■■□ 3.2
FAAP20-207ENST00000420515 MYL6BP14649 208 aa35.02■■■■□ 3.2
FAAP20-207ENST00000420515 HMGB2P26583 209 aaKnown RBP35.02■■■■□ 3.2
FAAP20-207ENST00000420515 EIF5P55010 431 aaKnown RBP35.02■■■■□ 3.2
FAAP20-207ENST00000420515 LRP10Q7Z4F1 713 aa35.01■■■■□ 3.2
FAAP20-207ENST00000420515 SSFA2P28290 1259 aa35.01■■■■□ 3.19
FAAP20-207ENST00000420515 IL6STP40189 918 aaPredicted RBP35■■■■□ 3.19
FAAP20-207ENST00000420515 ARHGEF1Q92888 912 aaKnown RBP35■■■■□ 3.19
FAAP20-207ENST00000420515 BCORQ6W2J9 1755 aa34.99■■■■□ 3.19
FAAP20-207ENST00000420515 ERBB4Q15303 1308 aa34.98■■■■□ 3.19
FAAP20-207ENST00000420515 SCN7AQ01118 1682 aa34.97■■■■□ 3.19
FAAP20-207ENST00000420515 CACNA1FO60840 1977 aa34.97■■■■□ 3.19
FAAP20-207ENST00000420515 TRAPPC3LQ5T215 181 aa34.96■■■■□ 3.19
FAAP20-207ENST00000420515 DDX21Q9NR30 783 aaKnown RBP eCLIP34.96■■■■□ 3.19
FAAP20-207ENST00000420515 CCDC30Q5VVM6 783 aa34.95■■■■□ 3.19
FAAP20-207ENST00000420515 MSH5O43196 834 aa34.94■■■■□ 3.18
FAAP20-207ENST00000420515 DBF4Q9UBU7 674 aaPredicted RBP34.94■■■■□ 3.18
FAAP20-207ENST00000420515 SRP68Q9UHB9 627 aaKnown RBP34.94■■■■□ 3.18
FAAP20-207ENST00000420515 ADRA2BP18089 450 aa34.93■■■■□ 3.18
FAAP20-207ENST00000420515 TBC1D2BQ9UPU7 963 aa34.92■■■■□ 3.18
FAAP20-207ENST00000420515 TTLL7Q6ZT98 887 aa34.91■■■■□ 3.18
FAAP20-207ENST00000420515 PHAXQ9H814 394 aaKnown RBP34.91■■■■□ 3.18
FAAP20-207ENST00000420515 NUP98P52948 1817 aa34.9■■■■□ 3.18
FAAP20-207ENST00000420515 RFC4P35249 363 aa34.9■■■■□ 3.18
FAAP20-207ENST00000420515 FLAD1Q8NFF5 587 aa34.9■■■■□ 3.18
FAAP20-207ENST00000420515 USP42Q9H9J4 1324 aaKnown RBP34.89■■■■□ 3.18
FAAP20-207ENST00000420515 DZIP3Q86Y13 1208 aaKnown RBP34.89■■■■□ 3.18
FAAP20-207ENST00000420515 ARXQ96QS3 562 aa34.89■■■■□ 3.18
FAAP20-207ENST00000420515 G2E3Q7L622 706 aa34.88■■■■□ 3.17
FAAP20-207ENST00000420515 XAGE3Q8WTP9 111 aa34.88■■■■□ 3.17
FAAP20-207ENST00000420515 SLC4A2P04920 1241 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 AIMP1Q12904 312 aaKnown RBP34.87■■■■□ 3.17
FAAP20-207ENST00000420515 USPL1Q5W0Q7 1092 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 COPS6Q7L5N1 327 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 BCL2L13Q9BXK5 485 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 COL24A1Q17RW2 1714 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 ARFGEF2Q9Y6D5 1785 aa34.87■■■■□ 3.17
FAAP20-207ENST00000420515 STK31Q9BXU1 1019 aa34.86■■■■□ 3.17
FAAP20-207ENST00000420515 BCL2L12Q9HB09 334 aa34.86■■■■□ 3.17
FAAP20-207ENST00000420515 NARFQ9UHQ1 456 aa34.86■■■■□ 3.17
FAAP20-207ENST00000420515 SSH1Q8WYL5 1049 aa34.86■■■■□ 3.17
FAAP20-207ENST00000420515 HYPKQ9NX55 129 aa34.86■■■■□ 3.17
FAAP20-207ENST00000420515 CAMTA2O94983 1202 aa34.85■■■■□ 3.17
FAAP20-207ENST00000420515 ZBTB7AO95365 584 aa34.85■■■■□ 3.17
FAAP20-207ENST00000420515 A0A087WZG4 1122 aa34.84■■■■□ 3.17
FAAP20-207ENST00000420515 GYS1P13807 737 aa34.84■■■■□ 3.17
FAAP20-207ENST00000420515 MSL1Q68DK7 614 aa34.84■■■■□ 3.17
FAAP20-207ENST00000420515 CT47B1P0C2W7 299 aaPredicted RBP34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms