RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 MMP10P09238 476 aa28.21■■■□□ 2.11
CPNE1-211ENST00000420363 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
CPNE1-211ENST00000420363 DCTN1Q14203 1278 aa28.21■■■□□ 2.11
CPNE1-211ENST00000420363 NLGN1Q8N2Q7 840 aa28.2■■■□□ 2.1
CPNE1-211ENST00000420363 CCDC87Q9NVE4 849 aa28.2■■■□□ 2.1
CPNE1-211ENST00000420363 ANP32CO43423 234 aa28.19■■■□□ 2.1
CPNE1-211ENST00000420363 LMOD3Q0VAK6 560 aa28.19■■■□□ 2.1
CPNE1-211ENST00000420363 INTS5Q6P9B9 1019 aaKnown RBP28.19■■■□□ 2.1
CPNE1-211ENST00000420363 RUNDC1Q96C34 613 aa28.19■■■□□ 2.1
CPNE1-211ENST00000420363 TEX13AQ9BXU3 409 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-211ENST00000420363 ADAMTS8Q9UP79 889 aa28.19■■■□□ 2.1
CPNE1-211ENST00000420363 TAF7Q15545 349 aaPredicted RBP28.18■■■□□ 2.1
CPNE1-211ENST00000420363 TMPOP42166 694 aaKnown RBP28.17■■■□□ 2.1
CPNE1-211ENST00000420363 PNISRQ8TF01 805 aaKnown RBP28.17■■■□□ 2.1
CPNE1-211ENST00000420363 ARHGEF1Q92888 912 aaKnown RBP28.17■■■□□ 2.1
CPNE1-211ENST00000420363 ATP10DQ9P241 1426 aa28.17■■■□□ 2.1
CPNE1-211ENST00000420363 SOS1Q07889 1333 aaPredicted RBP28.17■■■□□ 2.1
CPNE1-211ENST00000420363 STARD3NLO95772 234 aa28.16■■■□□ 2.1
CPNE1-211ENST00000420363 RFC4P35249 363 aa28.16■■■□□ 2.1
CPNE1-211ENST00000420363 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
CPNE1-211ENST00000420363 RIPK4P57078 832 aa28.15■■■□□ 2.1
CPNE1-211ENST00000420363 GPBP1L1Q9HC44 474 aaPredicted RBP28.15■■■□□ 2.1
CPNE1-211ENST00000420363 CCDC146Q8IYE0 955 aa28.14■■■□□ 2.1
CPNE1-211ENST00000420363 KCNQ3O43525 872 aa28.13■■■□□ 2.09
CPNE1-211ENST00000420363 ZBTB1Q9Y2K1 713 aa28.13■■■□□ 2.09
CPNE1-211ENST00000420363 COL15A1P39059 1388 aa28.12■■■□□ 2.09
CPNE1-211ENST00000420363 USP42Q9H9J4 1324 aaKnown RBP28.12■■■□□ 2.09
CPNE1-211ENST00000420363 TGFB2P61812 414 aa28.11■■■□□ 2.09
CPNE1-211ENST00000420363 ZNF526Q8TF50 670 aaPredicted RBP28.11■■■□□ 2.09
CPNE1-211ENST00000420363 THUMPD2Q9BTF0 503 aaKnown RBP28.1■■■□□ 2.09
CPNE1-211ENST00000420363 SNRPA1P09661 255 aaKnown RBP28.09■■■□□ 2.09
CPNE1-211ENST00000420363 GYS1P13807 737 aa28.09■■■□□ 2.09
CPNE1-211ENST00000420363 PARP3Q9Y6F1 533 aa28.09■■■□□ 2.09
CPNE1-211ENST00000420363 SCN7AQ01118 1682 aa28.09■■■□□ 2.09
CPNE1-211ENST00000420363 BABAM1Q9NWV8 329 aa28.08■■■□□ 2.09
CPNE1-211ENST00000420363 A0A0G2JLW4 131 aa28.07■■■□□ 2.08
CPNE1-211ENST00000420363 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
CPNE1-211ENST00000420363 RRP7AQ9Y3A4 280 aaKnown RBP28.06■■■□□ 2.08
CPNE1-211ENST00000420363 ADCY9O60503 1353 aa28.06■■■□□ 2.08
CPNE1-211ENST00000420363 EIF5P55010 431 aaKnown RBP28.05■■■□□ 2.08
CPNE1-211ENST00000420363 KIF13BQ9NQT8 1826 aa28.05■■■□□ 2.08
CPNE1-211ENST00000420363 BCS1LQ9Y276 419 aa28.05■■■□□ 2.08
CPNE1-211ENST00000420363 IL6STP40189 918 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-211ENST00000420363 MRS2Q9HD23 443 aa28.04■■■□□ 2.08
CPNE1-211ENST00000420363 MIS18AQ9NYP9 233 aa28.04■■■□□ 2.08
CPNE1-211ENST00000420363 TRIM35Q9UPQ4 493 aa28.04■■■□□ 2.08
CPNE1-211ENST00000420363 PXDNLA1KZ92 1463 aa28.03■■■□□ 2.08
CPNE1-211ENST00000420363 A0A087WZG4 1122 aa28.03■■■□□ 2.08
CPNE1-211ENST00000420363 CANXP27824 592 aaKnown RBP28.03■■■□□ 2.08
CPNE1-211ENST00000420363 SRP68Q9UHB9 627 aaKnown RBP28.03■■■□□ 2.08
CPNE1-211ENST00000420363 NARFQ9UHQ1 456 aa28.03■■■□□ 2.08
CPNE1-211ENST00000420363 BCORQ6W2J9 1755 aa28.02■■■□□ 2.08
CPNE1-211ENST00000420363 ZPR1O75312 459 aa28.02■■■□□ 2.08
CPNE1-211ENST00000420363 DPEP1P16444 411 aa28.02■■■□□ 2.08
CPNE1-211ENST00000420363 EIF4A1P60842 406 aaKnown RBP28.02■■■□□ 2.08
CPNE1-211ENST00000420363 NEUROD2Q15784 382 aa28.02■■■□□ 2.08
CPNE1-211ENST00000420363 TSPYL4Q9UJ04 414 aa28.01■■■□□ 2.07
CPNE1-211ENST00000420363 USP16Q9Y5T5 823 aa28.01■■■□□ 2.07
CPNE1-211ENST00000420363 C10orf71Q711Q0 1435 aa28.01■■■□□ 2.07
CPNE1-211ENST00000420363 PRAMEF22A3QJZ6 481 aa28■■■□□ 2.07
CPNE1-211ENST00000420363 ARHGAP27Q6ZUM4 889 aa28■■■□□ 2.07
CPNE1-211ENST00000420363 APAF1O14727 1248 aa27.99■■■□□ 2.07
CPNE1-211ENST00000420363 A1BGP04217 495 aa27.99■■■□□ 2.07
CPNE1-211ENST00000420363 FKBP8Q14318 412 aa27.99■■■□□ 2.07
CPNE1-211ENST00000420363 USPL1Q5W0Q7 1092 aa27.98■■■□□ 2.07
CPNE1-211ENST00000420363 NRXN2Q9P2S2 1712 aa27.96■■■□□ 2.07
CPNE1-211ENST00000420363 KIAA1551Q9HCM1 1747 aa27.95■■■□□ 2.07
CPNE1-211ENST00000420363 NPM2Q86SE8 214 aaKnown RBP27.95■■■□□ 2.06
CPNE1-211ENST00000420363 N4BP2Q86UW6 1770 aaPredicted RBP27.95■■■□□ 2.06
CPNE1-211ENST00000420363 CHL1O00533 1208 aa27.94■■■□□ 2.06
CPNE1-211ENST00000420363 BCL2L12Q9HB09 334 aa27.94■■■□□ 2.06
CPNE1-211ENST00000420363 PIM2Q9P1W9 311 aa27.94■■■□□ 2.06
CPNE1-211ENST00000420363 TM4SF1P30408 202 aa27.93■■■□□ 2.06
CPNE1-211ENST00000420363 CALD1Q05682 793 aaKnown RBP27.93■■■□□ 2.06
CPNE1-211ENST00000420363 ERBB4Q15303 1308 aa27.92■■■□□ 2.06
CPNE1-211ENST00000420363 CEP350Q5VT06 3117 aa27.92■■■□□ 2.06
CPNE1-211ENST00000420363 KCNA3P22001 575 aa27.92■■■□□ 2.06
CPNE1-211ENST00000420363 DDR1Q08345 913 aa27.92■■■□□ 2.06
CPNE1-211ENST00000420363 NCBP3Q53F19 620 aaKnown RBP27.92■■■□□ 2.06
CPNE1-211ENST00000420363 ZNF330Q9Y3S2 320 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-211ENST00000420363 AFDNP55196 1824 aaKnown RBP27.92■■■□□ 2.06
CPNE1-211ENST00000420363 NBPF26B4DH59 902 aa27.91■■■□□ 2.06
CPNE1-211ENST00000420363 POLRMTO00411 1230 aaKnown RBP27.91■■■□□ 2.06
CPNE1-211ENST00000420363 RGL2O15211 777 aa27.91■■■□□ 2.06
CPNE1-211ENST00000420363 HSPA6P17066 643 aa27.91■■■□□ 2.06
CPNE1-211ENST00000420363 NBPF10Q6P3W6 841 aaKnown RBP27.91■■■□□ 2.06
CPNE1-211ENST00000420363 NBPF15Q8N660 670 aa27.91■■■□□ 2.06
CPNE1-211ENST00000420363 CFAP44Q96MT7 982 aa27.91■■■□□ 2.06
CPNE1-211ENST00000420363 KIF3CO14782 793 aa27.9■■■□□ 2.06
CPNE1-211ENST00000420363 CAMTA2O94983 1202 aa27.89■■■□□ 2.06
CPNE1-211ENST00000420363 NFIXQ14938 502 aa27.89■■■□□ 2.06
CPNE1-211ENST00000420363 CCDC27Q2M243 656 aa27.89■■■□□ 2.06
CPNE1-211ENST00000420363 DALRD3Q5D0E6 543 aaKnown RBP27.89■■■□□ 2.06
CPNE1-211ENST00000420363 PIP4K2AP48426 406 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-211ENST00000420363 DZIP3Q86Y13 1208 aaKnown RBP27.88■■■□□ 2.05
CPNE1-211ENST00000420363 IFT57Q9NWB7 429 aa27.88■■■□□ 2.05
CPNE1-211ENST00000420363 TBC1D2BQ9UPU7 963 aa27.88■■■□□ 2.05
CPNE1-211ENST00000420363 ZNF853P0CG23 659 aa27.86■■■□□ 2.05
CPNE1-211ENST00000420363 BRCA1P38398 1863 aaKnown RBP27.85■■■□□ 2.05
CPNE1-211ENST00000420363 HOXB7P09629 217 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms