RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-208ENST00000419606 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
ATG4B-208ENST00000419606 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
ATG4B-208ENST00000419606 HOXB7P09629 217 aa16.52■□□□□ 0.24
ATG4B-208ENST00000419606 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
ATG4B-208ENST00000419606 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.24
ATG4B-208ENST00000419606 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
ATG4B-208ENST00000419606 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
ATG4B-208ENST00000419606 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 BCAR3O75815 825 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 PDIA6Q15084 440 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
ATG4B-208ENST00000419606 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
ATG4B-208ENST00000419606 RREB1Q92766 1687 aa16.5■□□□□ 0.23
ATG4B-208ENST00000419606 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-208ENST00000419606 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
ATG4B-208ENST00000419606 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
ATG4B-208ENST00000419606 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-208ENST00000419606 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
ATG4B-208ENST00000419606 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
ATG4B-208ENST00000419606 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-208ENST00000419606 MYL6BP14649 208 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 BAG6P46379 1132 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 SLC27A3Q5K4L6 730 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 G2E3Q7L622 706 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
ATG4B-208ENST00000419606 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
ATG4B-208ENST00000419606 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
ATG4B-208ENST00000419606 STARD3NLO95772 234 aa16.48■□□□□ 0.23
ATG4B-208ENST00000419606 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
ATG4B-208ENST00000419606 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
ATG4B-208ENST00000419606 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
ATG4B-208ENST00000419606 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
ATG4B-208ENST00000419606 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
ATG4B-208ENST00000419606 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
ATG4B-208ENST00000419606 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
ATG4B-208ENST00000419606 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
ATG4B-208ENST00000419606 ALDH1L2Q3SY69 923 aa16.46■□□□□ 0.23
ATG4B-208ENST00000419606 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
ATG4B-208ENST00000419606 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
ATG4B-208ENST00000419606 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
ATG4B-208ENST00000419606 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
ATG4B-208ENST00000419606 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
ATG4B-208ENST00000419606 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-208ENST00000419606 ZNF330Q9Y3S2 320 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-208ENST00000419606 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
ATG4B-208ENST00000419606 CENPBP07199 599 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-208ENST00000419606 AIMP1Q12904 312 aaKnown RBP16.44■□□□□ 0.22
ATG4B-208ENST00000419606 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
ATG4B-208ENST00000419606 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-208ENST00000419606 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
ATG4B-208ENST00000419606 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
ATG4B-208ENST00000419606 ERBB4Q15303 1308 aa16.44■□□□□ 0.22
ATG4B-208ENST00000419606 GNPATO15228 680 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 PLIN1O60240 522 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 XAGE3Q8WTP9 111 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 NOB1Q9ULX3 412 aaKnown RBP16.43■□□□□ 0.22
ATG4B-208ENST00000419606 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
ATG4B-208ENST00000419606 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
ATG4B-208ENST00000419606 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-208ENST00000419606 AK7Q96M32 723 aa16.42■□□□□ 0.22
ATG4B-208ENST00000419606 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
ATG4B-208ENST00000419606 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
ATG4B-208ENST00000419606 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
ATG4B-208ENST00000419606 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-208ENST00000419606 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
ATG4B-208ENST00000419606 FLIIQ13045 1269 aa16.41■□□□□ 0.22
ATG4B-208ENST00000419606 PHF14O94880 888 aa16.4■□□□□ 0.22
ATG4B-208ENST00000419606 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-208ENST00000419606 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
ATG4B-208ENST00000419606 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
ATG4B-208ENST00000419606 ARXQ96QS3 562 aa16.39■□□□□ 0.21
ATG4B-208ENST00000419606 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
ATG4B-208ENST00000419606 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
ATG4B-208ENST00000419606 COL15A1P39059 1388 aa16.38■□□□□ 0.21
ATG4B-208ENST00000419606 F6X3S4 739 aa16.38■□□□□ 0.21
ATG4B-208ENST00000419606 ADCY9O60503 1353 aa16.38■□□□□ 0.21
ATG4B-208ENST00000419606 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
ATG4B-208ENST00000419606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 FKBP5Q13451 457 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
ATG4B-208ENST00000419606 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
ATG4B-208ENST00000419606 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
ATG4B-208ENST00000419606 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
ATG4B-208ENST00000419606 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
ATG4B-208ENST00000419606 PI4KAP2A4QPH2 592 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 TRIM27P14373 513 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 HLFQ16534 295 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 PI4KAP1Q8N8J0 262 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 CLUAP1Q96AJ1 413 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms