RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 TMPOP42166 694 aaKnown RBP34.38■■■■□ 3.09
CAPN7-203ENST00000418994 RIPK4P57078 832 aa34.38■■■■□ 3.09
CAPN7-203ENST00000418994 RUNDC1Q96C34 613 aa34.37■■■■□ 3.09
CAPN7-203ENST00000418994 THUMPD2Q9BTF0 503 aaKnown RBP34.37■■■■□ 3.09
CAPN7-203ENST00000418994 USP42Q9H9J4 1324 aaKnown RBP34.36■■■■□ 3.09
CAPN7-203ENST00000418994 PNISRQ8TF01 805 aaKnown RBP34.36■■■■□ 3.09
CAPN7-203ENST00000418994 MMP10P09238 476 aa34.35■■■■□ 3.09
CAPN7-203ENST00000418994 SRP68Q9UHB9 627 aaKnown RBP34.35■■■■□ 3.09
CAPN7-203ENST00000418994 CANXP27824 592 aaKnown RBP34.34■■■■□ 3.09
CAPN7-203ENST00000418994 LMOD3Q0VAK6 560 aa34.34■■■■□ 3.09
CAPN7-203ENST00000418994 MIS18AQ9NYP9 233 aa34.34■■■■□ 3.09
CAPN7-203ENST00000418994 COL15A1P39059 1388 aa34.34■■■■□ 3.09
CAPN7-203ENST00000418994 ANP32CO43423 234 aa34.33■■■■□ 3.09
CAPN7-203ENST00000418994 CD2APQ9Y5K6 639 aa34.33■■■■□ 3.09
CAPN7-203ENST00000418994 SNRPA1P09661 255 aaKnown RBP34.32■■■■□ 3.08
CAPN7-203ENST00000418994 NLGN2Q8NFZ4 835 aa34.32■■■■□ 3.08
CAPN7-203ENST00000418994 ZPR1O75312 459 aa34.31■■■■□ 3.08
CAPN7-203ENST00000418994 RRP7AQ9Y3A4 280 aaKnown RBP34.31■■■■□ 3.08
CAPN7-203ENST00000418994 EIF5P55010 431 aaKnown RBP34.29■■■■□ 3.08
CAPN7-203ENST00000418994 FKBP8Q14318 412 aa34.28■■■■□ 3.08
CAPN7-203ENST00000418994 NEUROD2Q15784 382 aa34.28■■■■□ 3.08
CAPN7-203ENST00000418994 NARFQ9UHQ1 456 aa34.28■■■■□ 3.08
CAPN7-203ENST00000418994 USP16Q9Y5T5 823 aa34.28■■■■□ 3.08
CAPN7-203ENST00000418994 KDM3BQ7LBC6 1761 aa34.28■■■■□ 3.08
CAPN7-203ENST00000418994 PRAMEF22A3QJZ6 481 aa34.27■■■■□ 3.08
CAPN7-203ENST00000418994 USPL1Q5W0Q7 1092 aa34.27■■■■□ 3.08
CAPN7-203ENST00000418994 A0A087WZG4 1122 aa34.26■■■■□ 3.08
CAPN7-203ENST00000418994 A1BGP04217 495 aa34.26■■■■□ 3.08
CAPN7-203ENST00000418994 CCDC184Q52MB2 194 aa34.26■■■■□ 3.08
CAPN7-203ENST00000418994 IL6STP40189 918 aaPredicted RBP34.25■■■■□ 3.07
CAPN7-203ENST00000418994 PARP3Q9Y6F1 533 aa34.24■■■■□ 3.07
CAPN7-203ENST00000418994 YY1P25490 414 aa34.23■■■■□ 3.07
CAPN7-203ENST00000418994 EIF4A1P60842 406 aaKnown RBP34.22■■■■□ 3.07
CAPN7-203ENST00000418994 ZNF330Q9Y3S2 320 aaPredicted RBP34.22■■■■□ 3.07
CAPN7-203ENST00000418994 BABAM1Q9NWV8 329 aa34.21■■■■□ 3.07
CAPN7-203ENST00000418994 TSPYL4Q9UJ04 414 aa34.21■■■■□ 3.07
CAPN7-203ENST00000418994 TRIM35Q9UPQ4 493 aa34.21■■■■□ 3.07
CAPN7-203ENST00000418994 GPR162Q16538 588 aa34.2■■■■□ 3.07
CAPN7-203ENST00000418994 NPM2Q86SE8 214 aaKnown RBP34.2■■■■□ 3.07
CAPN7-203ENST00000418994 GIGYF1O75420 1035 aaPredicted RBP34.18■■■■□ 3.06
CAPN7-203ENST00000418994 TM4SF1P30408 202 aa34.18■■■■□ 3.06
CAPN7-203ENST00000418994 DDR1Q08345 913 aa34.18■■■■□ 3.06
CAPN7-203ENST00000418994 BCL2L12Q9HB09 334 aa34.18■■■■□ 3.06
CAPN7-203ENST00000418994 PELP1Q8IZL8 1130 aaKnown RBP34.17■■■■□ 3.06
CAPN7-203ENST00000418994 MRS2Q9HD23 443 aa34.17■■■■□ 3.06
CAPN7-203ENST00000418994 LAMB4A4D0S4 1761 aa34.16■■■■□ 3.06
CAPN7-203ENST00000418994 C10orf71Q711Q0 1435 aa34.16■■■■□ 3.06
CAPN7-203ENST00000418994 APAF1O14727 1248 aa34.16■■■■□ 3.06
CAPN7-203ENST00000418994 PIP4K2AP48426 406 aaPredicted RBP34.16■■■■□ 3.06
CAPN7-203ENST00000418994 TBC1D2BQ9UPU7 963 aa34.16■■■■□ 3.06
CAPN7-203ENST00000418994 KIF13BQ9NQT8 1826 aa34.14■■■■□ 3.06
CAPN7-203ENST00000418994 POLRMTO00411 1230 aaKnown RBP34.14■■■■□ 3.06
CAPN7-203ENST00000418994 NFIXQ14938 502 aa34.14■■■■□ 3.06
CAPN7-203ENST00000418994 SCN7AQ01118 1682 aa34.12■■■■□ 3.05
CAPN7-203ENST00000418994 UTRNP46939 3433 aa34.12■■■■□ 3.05
CAPN7-203ENST00000418994 NBPF26B4DH59 902 aa34.12■■■■□ 3.05
CAPN7-203ENST00000418994 NBPF10Q6P3W6 841 aaKnown RBP34.12■■■■□ 3.05
CAPN7-203ENST00000418994 NBPF15Q8N660 670 aa34.12■■■■□ 3.05
CAPN7-203ENST00000418994 DZIP3Q86Y13 1208 aaKnown RBP34.11■■■■□ 3.05
CAPN7-203ENST00000418994 GOLGB1Q14789 3259 aaKnown RBP34.11■■■■□ 3.05
CAPN7-203ENST00000418994 TGFB2P61812 414 aa34.1■■■■□ 3.05
CAPN7-203ENST00000418994 CHL1O00533 1208 aa34.09■■■■□ 3.05
CAPN7-203ENST00000418994 CAMTA2O94983 1202 aa34.09■■■■□ 3.05
CAPN7-203ENST00000418994 YBX3P16989 372 aaKnown RBP eCLIP34.09■■■■□ 3.05
CAPN7-203ENST00000418994 PXDNLA1KZ92 1463 aa34.08■■■■□ 3.05
CAPN7-203ENST00000418994 LAS1LQ9Y4W2 734 aaKnown RBP34.08■■■■□ 3.05
CAPN7-203ENST00000418994 BICDL1Q6ZP65 573 aa34.06■■■■□ 3.04
CAPN7-203ENST00000418994 TBC1D9BQ66K14 1250 aa34.05■■■■□ 3.04
CAPN7-203ENST00000418994 BCORQ6W2J9 1755 aa34.05■■■■□ 3.04
CAPN7-203ENST00000418994 KIAA1551Q9HCM1 1747 aa34.04■■■■□ 3.04
CAPN7-203ENST00000418994 GRIN3BO60391 1043 aa34.04■■■■□ 3.04
CAPN7-203ENST00000418994 SERPINB2P05120 415 aa34.04■■■■□ 3.04
CAPN7-203ENST00000418994 CFAP44Q96MT7 982 aa34.03■■■■□ 3.04
CAPN7-203ENST00000418994 AFDNP55196 1824 aaKnown RBP34.02■■■■□ 3.04
CAPN7-203ENST00000418994 NRXN2Q9P2S2 1712 aa34.02■■■■□ 3.04
CAPN7-203ENST00000418994 A0A0G2JLW4 131 aa34.02■■■■□ 3.04
CAPN7-203ENST00000418994 CALD1Q05682 793 aaKnown RBP34.02■■■■□ 3.04
CAPN7-203ENST00000418994 ERBB4Q15303 1308 aa34.02■■■■□ 3.04
CAPN7-203ENST00000418994 N4BP2Q86UW6 1770 aaPredicted RBP34.01■■■■□ 3.04
CAPN7-203ENST00000418994 DPEP1P16444 411 aa34.01■■■■□ 3.03
CAPN7-203ENST00000418994 WWC3Q9ULE0 1092 aa34.01■■■■□ 3.03
CAPN7-203ENST00000418994 CLEC4GQ6UXB4 293 aa34■■■■□ 3.03
CAPN7-203ENST00000418994 ZNF652Q9Y2D9 606 aa34■■■■□ 3.03
CAPN7-203ENST00000418994 CARMIL3Q8ND23 1372 aa33.99■■■■□ 3.03
CAPN7-203ENST00000418994 CHD4Q14839 1912 aa33.98■■■■□ 3.03
CAPN7-203ENST00000418994 RGL2O15211 777 aa33.98■■■■□ 3.03
CAPN7-203ENST00000418994 MYL6BP14649 208 aa33.98■■■■□ 3.03
CAPN7-203ENST00000418994 EIF2S2P20042 333 aaKnown RBP33.98■■■■□ 3.03
CAPN7-203ENST00000418994 NGEFQ8N5V2 710 aa33.98■■■■□ 3.03
CAPN7-203ENST00000418994 SETDB2Q96T68 719 aa33.98■■■■□ 3.03
CAPN7-203ENST00000418994 IFT57Q9NWB7 429 aa33.97■■■■□ 3.03
CAPN7-203ENST00000418994 ZNF853P0CG23 659 aa33.96■■■■□ 3.03
CAPN7-203ENST00000418994 KRT24Q2M2I5 525 aa33.96■■■■□ 3.03
CAPN7-203ENST00000418994 MBIPQ9NS73 344 aa33.96■■■■□ 3.03
CAPN7-203ENST00000418994 KCNA3P22001 575 aa33.94■■■■□ 3.02
CAPN7-203ENST00000418994 GNAI1P63096 354 aa33.94■■■■□ 3.02
CAPN7-203ENST00000418994 CCDC27Q2M243 656 aa33.93■■■■□ 3.02
CAPN7-203ENST00000418994 KIF6Q6ZMV9 814 aa33.93■■■■□ 3.02
CAPN7-203ENST00000418994 PDIA6Q15084 440 aa33.92■■■■□ 3.02
CAPN7-203ENST00000418994 MAP3K15Q6ZN16 1313 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms