RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 C11orf95C9JLR9 678 aaPredicted RBP4.88□□□□□ -1.63
VPS41-206ENST00000418457 C21orf2O43822 256 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 NOS2P35228 1153 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 PHKA2P46019 1235 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 PLA2G4AP47712 749 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 TEAD4Q15561 434 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 OCLNQ16625 522 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 WDR44Q5JSH3 913 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 NBPF10Q6P3W6 841 aaKnown RBP4.88□□□□□ -1.63
VPS41-206ENST00000418457 ZDHHC1Q8WTX9 485 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 VTI1AQ96AJ9 217 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 ZNF232Q9UNY5 417 aa4.88□□□□□ -1.63
VPS41-206ENST00000418457 SSFA2P28290 1259 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 FKBP5Q13451 457 aaPredicted RBP4.87□□□□□ -1.63
VPS41-206ENST00000418457 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 STAG2Q8N3U4 1231 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 C1orf216Q8TAB5 229 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 L3MBTL2Q969R5 705 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 AIDAQ96BJ3 306 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 C2orf49Q9BVC5 232 aaPredicted RBP4.87□□□□□ -1.63
VPS41-206ENST00000418457 TIMMDC1Q9NPL8 285 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 PARP3Q9Y6F1 533 aa4.87□□□□□ -1.63
VPS41-206ENST00000418457 EML1O00423 815 aa4.86□□□□□ -1.63
VPS41-206ENST00000418457 BRD1O95696 1058 aa4.86□□□□□ -1.63
VPS41-206ENST00000418457 SNRPBP14678 240 aaKnown RBP4.86□□□□□ -1.63
VPS41-206ENST00000418457 NBPF1Q3BBV0 1214 aa4.86□□□□□ -1.63
VPS41-206ENST00000418457 MKNK1Q9BUB5 465 aa4.86□□□□□ -1.63
VPS41-206ENST00000418457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■■■■ 113.6
VPS41-206ENST00000418457 A0A1B0GTH6 734 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 POTECB2RU33 542 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 PTCD1O75127 700 aaKnown RBP4.85□□□□□ -1.63
VPS41-206ENST00000418457 TATP17735 454 aaPredicted RBP4.85□□□□□ -1.63
VPS41-206ENST00000418457 HIRAP54198 1017 aaPredicted RBP4.85□□□□□ -1.63
VPS41-206ENST00000418457 PTSQ03393 145 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 SH3PXD2AQ5TCZ1 1133 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 PHLDB3Q6NSJ2 640 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 POTEAQ6S8J7 498 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 COL26A1Q96A83 441 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 ZDHHC3Q9NYG2 299 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 MTMR7Q9Y216 660 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 HCN4Q9Y3Q4 1203 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 DYRK1BQ9Y463 629 aa4.85□□□□□ -1.63
VPS41-206ENST00000418457 TXLNAP40222 546 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 AEBP1Q8IUX7 1158 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 ALDH16A1Q8IZ83 802 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 KCTD17Q8N5Z5 321 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 NGLY1Q96IV0 654 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 GAS2L1Q99501 681 aaPredicted RBP4.84□□□□□ -1.63
VPS41-206ENST00000418457 PHACTR1Q9C0D0 580 aa4.84□□□□□ -1.63
VPS41-206ENST00000418457 SENP3-EIF4A1A0A087X0R7 540 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 SLC35F4A4IF30 521 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 PATL2C9JE40 543 aaKnown RBP4.83□□□□□ -1.64
VPS41-206ENST00000418457 F11P03951 625 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 MSX1P28360 303 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 ARID4AP29374 1257 aaPredicted RBP4.83□□□□□ -1.64
VPS41-206ENST00000418457 SCNN1AP37088 669 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 KCNA1Q09470 495 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 C1orf53Q5VUE5 145 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 ZNF787Q6DD87 383 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 BICDL1Q6ZP65 573 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 CCDC155Q8N6L0 562 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 RHPN1Q8TCX5 695 aa4.83□□□□□ -1.64
VPS41-206ENST00000418457 ATP4AP20648 1035 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 NAA30Q147X3 362 aaPredicted RBP4.82□□□□□ -1.64
VPS41-206ENST00000418457 RTN1Q16799 776 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 ARSJQ5FYB0 599 aaPredicted RBP4.82□□□□□ -1.64
VPS41-206ENST00000418457 RIPOR1Q6ZS17 1223 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 PGBD3Q8N328 593 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 CCER1Q8TC90 406 aaPredicted RBP4.82□□□□□ -1.64
VPS41-206ENST00000418457 MYO19Q96H55 970 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 GPAMQ9HCL2 828 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 SEPT3Q9UH03 358 aa4.82□□□□□ -1.64
VPS41-206ENST00000418457 C16orf46Q6P387 395 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 CRISPLD1Q9H336 500 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 RUBCNLQ9H714 662 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 QTRT2Q9H974 415 aaKnown RBP4.81□□□□□ -1.64
VPS41-206ENST00000418457 NEUROD4Q9HD90 331 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 GPC6Q9Y625 555 aaPredicted RBP4.81□□□□□ -1.64
VPS41-206ENST00000418457 GJA3Q9Y6H8 435 aa4.81□□□□□ -1.64
VPS41-206ENST00000418457 A0A1W2PNR3 127 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 H7C1W4 665 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 PPFIA3O75145 1194 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 ABL1P00519 1130 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 ITGA6P23229 1130 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 SERPINB4P48594 390 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 DGKZQ13574 1117 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 HIF1AQ16665 826 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 EFHC2Q5JST6 749 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 COX20Q5RI15 118 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 GTF3C2Q8WUA4 911 aaPredicted RBP4.8□□□□□ -1.64
VPS41-206ENST00000418457 ZIC5Q96T25 663 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 SAP130Q9H0E3 1048 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 GNEQ9Y223 722 aaKnown RBP4.8□□□□□ -1.64
VPS41-206ENST00000418457 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
VPS41-206ENST00000418457 BRD2P25440 801 aaKnown RBP4.79□□□□□ -1.64
VPS41-206ENST00000418457 LBRQ14739 615 aaKnown RBP4.79□□□□□ -1.64
VPS41-206ENST00000418457 C11orf91Q3C1V1 193 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 NLRP8Q86W28 1048 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms