RNA–Protein interactions for RNA: ENST00000417962.5

SHISA5-204, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 2,306 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-204ENST00000417962 SSH3Q8TE77 659 aa23.07■■□□□ 1.28
SHISA5-204ENST00000417962 PKD1L3Q7Z443 1732 aa23.06■■□□□ 1.28
SHISA5-204ENST00000417962 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
SHISA5-204ENST00000417962 SLC39A6Q13433 755 aa23.06■■□□□ 1.28
SHISA5-204ENST00000417962 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
SHISA5-204ENST00000417962 ANTXR1Q9H6X2 564 aa23.06■■□□□ 1.28
SHISA5-204ENST00000417962 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
SHISA5-204ENST00000417962 SOS2Q07890 1332 aaPredicted RBP23.05■■□□□ 1.28
SHISA5-204ENST00000417962 MAP3K2Q9Y2U5 619 aa23.05■■□□□ 1.28
SHISA5-204ENST00000417962 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
SHISA5-204ENST00000417962 KSR2Q6VAB6 950 aa23.04■■□□□ 1.28
SHISA5-204ENST00000417962 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
SHISA5-204ENST00000417962 DCAF5Q96JK2 942 aa23.04■■□□□ 1.28
SHISA5-204ENST00000417962 SALL3Q9BXA9 1300 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 CYP27B1O15528 508 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 SNX21Q969T3 373 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 KIF2CQ99661 725 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
SHISA5-204ENST00000417962 C5P01031 1676 aa23.03■■□□□ 1.28
SHISA5-204ENST00000417962 POLA2Q14181 598 aa23.02■■□□□ 1.28
SHISA5-204ENST00000417962 SPRYD3Q8NCJ5 442 aa23.02■■□□□ 1.28
SHISA5-204ENST00000417962 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
SHISA5-204ENST00000417962 ALDH1L1O75891 902 aa23.02■■□□□ 1.28
SHISA5-204ENST00000417962 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
SHISA5-204ENST00000417962 MRC1P22897 1456 aa23.01■■□□□ 1.27
SHISA5-204ENST00000417962 MX1P20591 662 aa23.01■■□□□ 1.27
SHISA5-204ENST00000417962 SRGAP3O43295 1099 aa23■■□□□ 1.27
SHISA5-204ENST00000417962 RAB11FIP3O75154 756 aa23■■□□□ 1.27
SHISA5-204ENST00000417962 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
SHISA5-204ENST00000417962 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
SHISA5-204ENST00000417962 SURF6O75683 361 aaKnown RBP22.99■■□□□ 1.27
SHISA5-204ENST00000417962 PDIA6Q15084 440 aa22.99■■□□□ 1.27
SHISA5-204ENST00000417962 TTC5Q8N0Z6 440 aa22.99■■□□□ 1.27
SHISA5-204ENST00000417962 C9orf78Q9NZ63 289 aaPredicted RBP22.99■■□□□ 1.27
SHISA5-204ENST00000417962 TUBGCP6Q96RT7 1819 aa22.99■■□□□ 1.27
SHISA5-204ENST00000417962 PARP4Q9UKK3 1724 aaKnown RBP22.98■■□□□ 1.27
SHISA5-204ENST00000417962 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
SHISA5-204ENST00000417962 TSHZ3Q63HK5 1081 aa22.98■■□□□ 1.27
SHISA5-204ENST00000417962 TOM1L2Q6ZVM7 507 aa22.98■■□□□ 1.27
SHISA5-204ENST00000417962 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
SHISA5-204ENST00000417962 USP26Q9BXU7 913 aa22.97■■□□□ 1.27
SHISA5-204ENST00000417962 STAP2Q9UGK3 403 aa22.97■■□□□ 1.27
SHISA5-204ENST00000417962 ABCA3Q99758 1704 aa22.97■■□□□ 1.27
SHISA5-204ENST00000417962 CABP4P57796 275 aa22.96■■□□□ 1.27
SHISA5-204ENST00000417962 CWF19L2Q2TBE0 894 aaKnown RBP22.96■■□□□ 1.27
SHISA5-204ENST00000417962 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
SHISA5-204ENST00000417962 IL1RAPL2Q9NP60 686 aa22.96■■□□□ 1.27
SHISA5-204ENST00000417962 COL5A2P05997 1499 aaPredicted RBP22.96■■□□□ 1.27
SHISA5-204ENST00000417962 HDAC5Q9UQL6 1122 aa22.96■■□□□ 1.27
SHISA5-204ENST00000417962 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
SHISA5-204ENST00000417962 RHPN1Q8TCX5 695 aa22.95■■□□□ 1.26
SHISA5-204ENST00000417962 MYL6BP14649 208 aa22.94■■□□□ 1.26
SHISA5-204ENST00000417962 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
SHISA5-204ENST00000417962 REC8O95072 547 aa22.94■■□□□ 1.26
SHISA5-204ENST00000417962 MTX1Q13505 466 aa22.94■■□□□ 1.26
SHISA5-204ENST00000417962 KIF1BPQ96EK5 621 aa22.94■■□□□ 1.26
SHISA5-204ENST00000417962 ERC2O15083 957 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 HSP90AB4PQ58FF6 505 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 RIC3Q7Z5B4 369 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
SHISA5-204ENST00000417962 RBM42Q9BTD8 480 aaKnown RBP22.93■■□□□ 1.26
SHISA5-204ENST00000417962 AOX1Q06278 1338 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
SHISA5-204ENST00000417962 CHMP5Q9NZZ3 219 aa22.92■■□□□ 1.26
SHISA5-204ENST00000417962 USP16Q9Y5T5 823 aa22.92■■□□□ 1.26
SHISA5-204ENST00000417962 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
SHISA5-204ENST00000417962 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
SHISA5-204ENST00000417962 TRIM6-TRIM34B2RNG4 842 aa22.91■■□□□ 1.26
SHISA5-204ENST00000417962 GRM8O00222 908 aa22.91■■□□□ 1.26
SHISA5-204ENST00000417962 NUTM1Q86Y26 1132 aa22.91■■□□□ 1.26
SHISA5-204ENST00000417962 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
SHISA5-204ENST00000417962 CD2BP2O95400 341 aaKnown RBP22.9■■□□□ 1.26
SHISA5-204ENST00000417962 RABEP1Q15276 862 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 RILPL2Q969X0 211 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 UTYO14607 1347 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 NEXNQ0ZGT2 675 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 CARD10Q9BWT7 1032 aa22.9■■□□□ 1.26
SHISA5-204ENST00000417962 K7ELQ4 463 aaPredicted RBP22.89■■□□□ 1.25
SHISA5-204ENST00000417962 IGKV5-2P06315 115 aa22.88■■□□□ 1.25
SHISA5-204ENST00000417962 OS9Q13438 667 aaPredicted RBP22.88■■□□□ 1.25
SHISA5-204ENST00000417962 IL2RBP14784 551 aa22.88■■□□□ 1.25
SHISA5-204ENST00000417962 LAMB4A4D0S4 1761 aa22.87■■□□□ 1.25
SHISA5-204ENST00000417962 SUCLG2Q96I99 432 aa22.87■■□□□ 1.25
SHISA5-204ENST00000417962 STRN4Q9NRL3 753 aa22.87■■□□□ 1.25
SHISA5-204ENST00000417962 EVA1CP58658 441 aa22.87■■□□□ 1.25
SHISA5-204ENST00000417962 LRP10Q7Z4F1 713 aa22.87■■□□□ 1.25
SHISA5-204ENST00000417962 METTL22Q9BUU2 404 aaPredicted RBP22.87■■□□□ 1.25
SHISA5-204ENST00000417962 ANKRD13DQ6ZTN6 518 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 ESYT1Q9BSJ8 1104 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 GLI3P10071 1580 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 NEURL1BA8MQ27 555 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 CHMLP26374 656 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 PIP4K2AP48426 406 aaPredicted RBP22.86■■□□□ 1.25
SHISA5-204ENST00000417962 MYD88Q99836 296 aa22.86■■□□□ 1.25
SHISA5-204ENST00000417962 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
SHISA5-204ENST00000417962 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
SHISA5-204ENST00000417962 KAZALD1Q96I82 304 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms