RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
TGFBR3-203ENST00000417833 DNAJC10Q8IXB1 793 aa17.39■□□□□ 0.37
TGFBR3-203ENST00000417833 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.37
TGFBR3-203ENST00000417833 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
TGFBR3-203ENST00000417833 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
TGFBR3-203ENST00000417833 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
TGFBR3-203ENST00000417833 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
TGFBR3-203ENST00000417833 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
TGFBR3-203ENST00000417833 KCNQ3O43525 872 aa17.37■□□□□ 0.37
TGFBR3-203ENST00000417833 STARD3NLO95772 234 aa17.37■□□□□ 0.37
TGFBR3-203ENST00000417833 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
TGFBR3-203ENST00000417833 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
TGFBR3-203ENST00000417833 MSH5O43196 834 aa17.36■□□□□ 0.37
TGFBR3-203ENST00000417833 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
TGFBR3-203ENST00000417833 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
TGFBR3-203ENST00000417833 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
TGFBR3-203ENST00000417833 APAF1O14727 1248 aa17.35■□□□□ 0.37
TGFBR3-203ENST00000417833 PHF14O94880 888 aa17.35■□□□□ 0.37
TGFBR3-203ENST00000417833 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
TGFBR3-203ENST00000417833 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
TGFBR3-203ENST00000417833 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
TGFBR3-203ENST00000417833 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
TGFBR3-203ENST00000417833 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
TGFBR3-203ENST00000417833 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
TGFBR3-203ENST00000417833 HSPA6P17066 643 aa17.32■□□□□ 0.36
TGFBR3-203ENST00000417833 POLD1P28340 1107 aa17.32■□□□□ 0.36
TGFBR3-203ENST00000417833 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
TGFBR3-203ENST00000417833 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 CHL1O00533 1208 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 RFC4P35249 363 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
TGFBR3-203ENST00000417833 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-203ENST00000417833 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-203ENST00000417833 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
TGFBR3-203ENST00000417833 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
TGFBR3-203ENST00000417833 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
TGFBR3-203ENST00000417833 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
TGFBR3-203ENST00000417833 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 GYS1P13807 737 aa17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 COL15A1P39059 1388 aa17.28■□□□□ 0.36
TGFBR3-203ENST00000417833 A0A087WZG4 1122 aa17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 A1BGP04217 495 aa17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
TGFBR3-203ENST00000417833 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
TGFBR3-203ENST00000417833 ZPR1O75312 459 aa17.25■□□□□ 0.35
TGFBR3-203ENST00000417833 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
TGFBR3-203ENST00000417833 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
TGFBR3-203ENST00000417833 GNAI1P63096 354 aa17.24■□□□□ 0.35
TGFBR3-203ENST00000417833 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
TGFBR3-203ENST00000417833 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
TGFBR3-203ENST00000417833 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
TGFBR3-203ENST00000417833 SRP68Q9UHB9 627 aaKnown RBP17.24■□□□□ 0.35
TGFBR3-203ENST00000417833 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 USPL1Q5W0Q7 1092 aa17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
TGFBR3-203ENST00000417833 IL16Q14005 1332 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 RGL2O15211 777 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 MMP10P09238 476 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.351e-9■■□□□ 11.9
TGFBR3-203ENST00000417833 TM4SF1P30408 202 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 CD2APQ9Y5K6 639 aa17.22■□□□□ 0.35
TGFBR3-203ENST00000417833 HOXB7P09629 217 aa17.21■□□□□ 0.35
TGFBR3-203ENST00000417833 FKBP8Q14318 412 aa17.21■□□□□ 0.35
TGFBR3-203ENST00000417833 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
TGFBR3-203ENST00000417833 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
TGFBR3-203ENST00000417833 MBIPQ9NS73 344 aa17.21■□□□□ 0.35
TGFBR3-203ENST00000417833 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
TGFBR3-203ENST00000417833 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
TGFBR3-203ENST00000417833 TBC1D2BQ9UPU7 963 aa17.19■□□□□ 0.34
TGFBR3-203ENST00000417833 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
TGFBR3-203ENST00000417833 SCN7AQ01118 1682 aa17.19■□□□□ 0.34
TGFBR3-203ENST00000417833 ADCY9O60503 1353 aa17.18■□□□□ 0.34
TGFBR3-203ENST00000417833 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
TGFBR3-203ENST00000417833 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
TGFBR3-203ENST00000417833 CLEC4GQ6UXB4 293 aa17.18■□□□□ 0.34
TGFBR3-203ENST00000417833 BCORQ6W2J9 1755 aa17.17■□□□□ 0.34
TGFBR3-203ENST00000417833 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
TGFBR3-203ENST00000417833 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-203ENST00000417833 PDIA6Q15084 440 aa17.17■□□□□ 0.34
TGFBR3-203ENST00000417833 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-203ENST00000417833 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
TGFBR3-203ENST00000417833 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
TGFBR3-203ENST00000417833 DDR1Q08345 913 aa17.16■□□□□ 0.34
TGFBR3-203ENST00000417833 NFIXQ14938 502 aa17.16■□□□□ 0.34
TGFBR3-203ENST00000417833 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
TGFBR3-203ENST00000417833 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms