RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
TTC38-202ENST00000417709 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
TTC38-202ENST00000417709 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.69
TTC38-202ENST00000417709 SERPINB2P05120 415 aa19.38■□□□□ 0.69
TTC38-202ENST00000417709 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
TTC38-202ENST00000417709 PRELPP51888 382 aa19.38■□□□□ 0.69
TTC38-202ENST00000417709 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
TTC38-202ENST00000417709 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
TTC38-202ENST00000417709 TJP1Q07157 1748 aa19.37■□□□□ 0.69
TTC38-202ENST00000417709 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
TTC38-202ENST00000417709 GLTPD2A6NH11 291 aa19.37■□□□□ 0.69
TTC38-202ENST00000417709 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
TTC38-202ENST00000417709 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
TTC38-202ENST00000417709 TNS4Q8IZW8 715 aa19.37■□□□□ 0.69
TTC38-202ENST00000417709 H0YIN7 160 aa19.36■□□□□ 0.69
TTC38-202ENST00000417709 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
TTC38-202ENST00000417709 EIF4G2P78344 907 aaKnown RBP eCLIP19.36■□□□□ 0.69
TTC38-202ENST00000417709 BICDL1Q6ZP65 573 aa19.36■□□□□ 0.69
TTC38-202ENST00000417709 PCGF6Q9BYE7 350 aa19.36■□□□□ 0.69
TTC38-202ENST00000417709 KNSTRNQ9Y448 316 aa19.36■□□□□ 0.69
TTC38-202ENST00000417709 AFDNP55196 1824 aaKnown RBP19.36■□□□□ 0.69
TTC38-202ENST00000417709 SCN11AQ9UI33 1791 aa19.36■□□□□ 0.69
TTC38-202ENST00000417709 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
TTC38-202ENST00000417709 HMOX1P09601 288 aa19.35■□□□□ 0.69
TTC38-202ENST00000417709 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
TTC38-202ENST00000417709 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
TTC38-202ENST00000417709 ZBTB1Q9Y2K1 713 aa19.34■□□□□ 0.69
TTC38-202ENST00000417709 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
TTC38-202ENST00000417709 TNRC6CQ9HCJ0 1690 aaKnown RBP19.32■□□□□ 0.68
TTC38-202ENST00000417709 ADAMTS7Q9UKP4 1686 aa19.32■□□□□ 0.68
TTC38-202ENST00000417709 ZC3H4Q9UPT8 1303 aaKnown RBP19.31■□□□□ 0.68
TTC38-202ENST00000417709 DPY19L2Q6NUT2 758 aa19.31■□□□□ 0.68
TTC38-202ENST00000417709 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
TTC38-202ENST00000417709 COL15A1P39059 1388 aa19.31■□□□□ 0.68
TTC38-202ENST00000417709 POTECB2RU33 542 aa19.3■□□□□ 0.68
TTC38-202ENST00000417709 NFKBIEO00221 500 aa19.3■□□□□ 0.68
TTC38-202ENST00000417709 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
TTC38-202ENST00000417709 C21orf2O43822 256 aa19.29■□□□□ 0.68
TTC38-202ENST00000417709 STARD3NLO95772 234 aa19.29■□□□□ 0.68
TTC38-202ENST00000417709 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
TTC38-202ENST00000417709 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
TTC38-202ENST00000417709 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
TTC38-202ENST00000417709 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
TTC38-202ENST00000417709 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
TTC38-202ENST00000417709 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
TTC38-202ENST00000417709 TBC1D9BQ66K14 1250 aa19.27■□□□□ 0.68
TTC38-202ENST00000417709 TBC1D2BQ9UPU7 963 aa19.27■□□□□ 0.68
TTC38-202ENST00000417709 A0A087WZG4 1122 aa19.26■□□□□ 0.67
TTC38-202ENST00000417709 ERFEQ4G0M1 354 aa19.26■□□□□ 0.67
TTC38-202ENST00000417709 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
TTC38-202ENST00000417709 CARMIL3Q8ND23 1372 aa19.26■□□□□ 0.67
TTC38-202ENST00000417709 PDE6BP35913 854 aa19.25■□□□□ 0.67
TTC38-202ENST00000417709 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
TTC38-202ENST00000417709 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
TTC38-202ENST00000417709 NRXN2Q9P2S2 1712 aa19.24■□□□□ 0.67
TTC38-202ENST00000417709 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
TTC38-202ENST00000417709 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
TTC38-202ENST00000417709 DLEC1Q9Y238 1755 aa19.22■□□□□ 0.67
TTC38-202ENST00000417709 NPHP1O15259 732 aa19.22■□□□□ 0.67
TTC38-202ENST00000417709 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
TTC38-202ENST00000417709 PRR5LQ6MZQ0 368 aa19.22■□□□□ 0.67
TTC38-202ENST00000417709 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
TTC38-202ENST00000417709 DDNO94850 711 aaPredicted RBP19.21■□□□□ 0.67
TTC38-202ENST00000417709 A1BGP04217 495 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 TEFQ10587 303 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 CHADLQ6NUI6 762 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 IL17REQ8NFR9 667 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
TTC38-202ENST00000417709 PDZRN3Q9UPQ7 1066 aa19.21■□□□□ 0.67
TTC38-202ENST00000417709 POTEIP0CG38 1075 aa19.2■□□□□ 0.66
TTC38-202ENST00000417709 POTEJP0CG39 1038 aa19.2■□□□□ 0.66
TTC38-202ENST00000417709 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
TTC38-202ENST00000417709 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
TTC38-202ENST00000417709 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
TTC38-202ENST00000417709 DICER1Q9UPY3 1922 aaKnown RBP19.19■□□□□ 0.66
TTC38-202ENST00000417709 ZNF790Q6PG37 636 aa19.19■□□□□ 0.66
TTC38-202ENST00000417709 ANKRD31Q8N7Z5 1873 aa19.19■□□□□ 0.66
TTC38-202ENST00000417709 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
TTC38-202ENST00000417709 U2SURPO15042 1029 aaKnown RBP19.18■□□□□ 0.66
TTC38-202ENST00000417709 CNKSR1Q969H4 720 aa19.18■□□□□ 0.66
TTC38-202ENST00000417709 TAOK3Q9H2K8 898 aa19.18■□□□□ 0.66
TTC38-202ENST00000417709 MRC1P22897 1456 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 SLX4Q8IY92 1834 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
TTC38-202ENST00000417709 CNBD1Q8NA66 436 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 CREBZFQ9NS37 354 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 FER1L6Q2WGJ9 1857 aa19.17■□□□□ 0.66
TTC38-202ENST00000417709 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
TTC38-202ENST00000417709 KCNQ3O43525 872 aa19.15■□□□□ 0.66
TTC38-202ENST00000417709 SRGNP10124 158 aa19.15■□□□□ 0.66
TTC38-202ENST00000417709 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
TTC38-202ENST00000417709 PRPF40BQ6NWY9 871 aaKnown RBP19.15■□□□□ 0.66
TTC38-202ENST00000417709 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
TTC38-202ENST00000417709 UBR2Q8IWV8 1755 aa19.14■□□□□ 0.66
TTC38-202ENST00000417709 CACNA1SQ13698 1873 aa19.14■□□□□ 0.65
TTC38-202ENST00000417709 CAMTA2O94983 1202 aa19.14■□□□□ 0.65
TTC38-202ENST00000417709 PIP4K2AP48426 406 aaPredicted RBP19.14■□□□□ 0.65
TTC38-202ENST00000417709 ST5P78524 1137 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms