RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 TAF7Q15545 349 aaPredicted RBP28.73■■■□□ 2.19
CKLF-205ENST00000417030 NLGN1Q8N2Q7 840 aa28.73■■■□□ 2.19
CKLF-205ENST00000417030 THUMPD2Q9BTF0 503 aaKnown RBP28.73■■■□□ 2.19
CKLF-205ENST00000417030 TEX13AQ9BXU3 409 aaPredicted RBP28.73■■■□□ 2.19
CKLF-205ENST00000417030 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
CKLF-205ENST00000417030 TRIM35Q9UPQ4 493 aa28.72■■■□□ 2.19
CKLF-205ENST00000417030 MYH14Q7Z406 1995 aaKnown RBP28.71■■■□□ 2.19
CKLF-205ENST00000417030 STARD3NLO95772 234 aa28.71■■■□□ 2.19
CKLF-205ENST00000417030 FAM9BQ8IZU0 186 aa28.71■■■□□ 2.19
CKLF-205ENST00000417030 FMNL2Q96PY5 1086 aa28.71■■■□□ 2.19
CKLF-205ENST00000417030 KDM3BQ7LBC6 1761 aa28.7■■■□□ 2.18
CKLF-205ENST00000417030 HEG1Q9ULI3 1381 aa28.69■■■□□ 2.18
CKLF-205ENST00000417030 CD2APQ9Y5K6 639 aa28.68■■■□□ 2.18
CKLF-205ENST00000417030 KCNQ3O43525 872 aa28.67■■■□□ 2.18
CKLF-205ENST00000417030 GYS1P13807 737 aa28.66■■■□□ 2.18
CKLF-205ENST00000417030 MIER1Q8N108 512 aa28.65■■■□□ 2.18
CKLF-205ENST00000417030 SOS1Q07889 1333 aaPredicted RBP28.65■■■□□ 2.18
CKLF-205ENST00000417030 MMP10P09238 476 aa28.64■■■□□ 2.18
CKLF-205ENST00000417030 MIS18AQ9NYP9 233 aa28.64■■■□□ 2.18
CKLF-205ENST00000417030 ZBTB1Q9Y2K1 713 aa28.64■■■□□ 2.18
CKLF-205ENST00000417030 NLGN2Q8NFZ4 835 aa28.63■■■□□ 2.17
CKLF-205ENST00000417030 USP42Q9H9J4 1324 aaKnown RBP28.63■■■□□ 2.17
CKLF-205ENST00000417030 ZPR1O75312 459 aa28.62■■■□□ 2.17
CKLF-205ENST00000417030 BABAM1Q9NWV8 329 aa28.62■■■□□ 2.17
CKLF-205ENST00000417030 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
CKLF-205ENST00000417030 NCBP3Q53F19 620 aaKnown RBP28.61■■■□□ 2.17
CKLF-205ENST00000417030 SRP68Q9UHB9 627 aaKnown RBP28.61■■■□□ 2.17
CKLF-205ENST00000417030 GPR162Q16538 588 aa28.6■■■□□ 2.17
CKLF-205ENST00000417030 SNRPA1P09661 255 aaKnown RBP28.59■■■□□ 2.17
CKLF-205ENST00000417030 CCDC27Q2M243 656 aa28.59■■■□□ 2.17
CKLF-205ENST00000417030 TSPYL4Q9UJ04 414 aa28.59■■■□□ 2.17
CKLF-205ENST00000417030 PARP3Q9Y6F1 533 aa28.59■■■□□ 2.17
CKLF-205ENST00000417030 EIF5P55010 431 aaKnown RBP28.58■■■□□ 2.17
CKLF-205ENST00000417030 NARFQ9UHQ1 456 aa28.58■■■□□ 2.17
CKLF-205ENST00000417030 A0A087WZG4 1122 aa28.57■■■□□ 2.16
CKLF-205ENST00000417030 CALD1Q05682 793 aaKnown RBP28.57■■■□□ 2.16
CKLF-205ENST00000417030 FKBP8Q14318 412 aa28.57■■■□□ 2.16
CKLF-205ENST00000417030 COL15A1P39059 1388 aa28.57■■■□□ 2.16
CKLF-205ENST00000417030 C4AP0C0L4 1744 aa28.57■■■□□ 2.16
CKLF-205ENST00000417030 SENP3-EIF4A1A0A087X0R7 540 aa28.56■■■□□ 2.16
CKLF-205ENST00000417030 CHL1O00533 1208 aa28.56■■■□□ 2.16
CKLF-205ENST00000417030 EIF4A1P60842 406 aaKnown RBP28.56■■■□□ 2.16
CKLF-205ENST00000417030 USPL1Q5W0Q7 1092 aa28.56■■■□□ 2.16
CKLF-205ENST00000417030 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
CKLF-205ENST00000417030 IL6STP40189 918 aaPredicted RBP28.55■■■□□ 2.16
CKLF-205ENST00000417030 NPM2Q86SE8 214 aaKnown RBP28.55■■■□□ 2.16
CKLF-205ENST00000417030 A1BGP04217 495 aa28.54■■■□□ 2.16
CKLF-205ENST00000417030 WWC1Q8IX03 1113 aa28.54■■■□□ 2.16
CKLF-205ENST00000417030 CFAP44Q96MT7 982 aa28.54■■■□□ 2.16
CKLF-205ENST00000417030 LAMB4A4D0S4 1761 aa28.53■■■□□ 2.16
CKLF-205ENST00000417030 PELP1Q8IZL8 1130 aaKnown RBP28.53■■■□□ 2.16
CKLF-205ENST00000417030 LAS1LQ9Y4W2 734 aaKnown RBP28.53■■■□□ 2.16
CKLF-205ENST00000417030 TM4SF1P30408 202 aa28.52■■■□□ 2.16
CKLF-205ENST00000417030 NGEFQ8N5V2 710 aa28.52■■■□□ 2.16
CKLF-205ENST00000417030 PRAMEF22A3QJZ6 481 aa28.51■■■□□ 2.15
CKLF-205ENST00000417030 ZNF853P0CG23 659 aa28.51■■■□□ 2.15
CKLF-205ENST00000417030 GIGYF1O75420 1035 aaPredicted RBP28.5■■■□□ 2.15
CKLF-205ENST00000417030 IFT57Q9NWB7 429 aa28.5■■■□□ 2.15
CKLF-205ENST00000417030 ZNF330Q9Y3S2 320 aaPredicted RBP28.5■■■□□ 2.15
CKLF-205ENST00000417030 YY1P25490 414 aa28.49■■■□□ 2.15
CKLF-205ENST00000417030 TGFB2P61812 414 aa28.49■■■□□ 2.15
CKLF-205ENST00000417030 GNAI1P63096 354 aa28.49■■■□□ 2.15
CKLF-205ENST00000417030 GRIN3BO60391 1043 aa28.48■■■□□ 2.15
CKLF-205ENST00000417030 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
CKLF-205ENST00000417030 BCL2L12Q9HB09 334 aa28.47■■■□□ 2.15
CKLF-205ENST00000417030 POLRMTO00411 1230 aaKnown RBP28.46■■■□□ 2.15
CKLF-205ENST00000417030 DDR1Q08345 913 aa28.46■■■□□ 2.15
CKLF-205ENST00000417030 MBIPQ9NS73 344 aa28.46■■■□□ 2.15
CKLF-205ENST00000417030 TBC1D2BQ9UPU7 963 aa28.46■■■□□ 2.15
CKLF-205ENST00000417030 IL16Q14005 1332 aa28.45■■■□□ 2.15
CKLF-205ENST00000417030 NFIXQ14938 502 aa28.45■■■□□ 2.14
CKLF-205ENST00000417030 YBX3P16989 372 aaKnown RBP eCLIP28.44■■■□□ 2.141e-7■■■■□ 20.5
CKLF-205ENST00000417030 WDR63Q8IWG1 891 aa28.44■■■□□ 2.14
CKLF-205ENST00000417030 C10orf71Q711Q0 1435 aa28.43■■■□□ 2.14
CKLF-205ENST00000417030 DZIP3Q86Y13 1208 aaKnown RBP28.42■■■□□ 2.14
CKLF-205ENST00000417030 PIP4K2AP48426 406 aaPredicted RBP28.41■■■□□ 2.14
CKLF-205ENST00000417030 KIF13BQ9NQT8 1826 aa28.41■■■□□ 2.14
CKLF-205ENST00000417030 NBPF26B4DH59 902 aa28.4■■■□□ 2.14
CKLF-205ENST00000417030 NBPF10Q6P3W6 841 aaKnown RBP28.4■■■□□ 2.14
CKLF-205ENST00000417030 NBPF15Q8N660 670 aa28.4■■■□□ 2.14
CKLF-205ENST00000417030 A0A0G2JLW4 131 aa28.39■■■□□ 2.14
CKLF-205ENST00000417030 CAMTA2O94983 1202 aa28.39■■■□□ 2.14
CKLF-205ENST00000417030 SERPINB2P05120 415 aa28.39■■■□□ 2.14
CKLF-205ENST00000417030 KRT24Q2M2I5 525 aa28.39■■■□□ 2.14
CKLF-205ENST00000417030 BICDL1Q6ZP65 573 aa28.38■■■□□ 2.13
CKLF-205ENST00000417030 ZNF521Q96K83 1311 aa28.38■■■□□ 2.13
CKLF-205ENST00000417030 HOXB7P09629 217 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 DPEP1P16444 411 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 TBC1D9BQ66K14 1250 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 CLEC4GQ6UXB4 293 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 PXDNLA1KZ92 1463 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 UTRNP46939 3433 aa28.37■■■□□ 2.13
CKLF-205ENST00000417030 ERBB4Q15303 1308 aa28.36■■■□□ 2.13
CKLF-205ENST00000417030 RGL2O15211 777 aa28.35■■■□□ 2.13
CKLF-205ENST00000417030 TSR2Q969E8 191 aaKnown RBP28.35■■■□□ 2.13
CKLF-205ENST00000417030 SETDB2Q96T68 719 aa28.35■■■□□ 2.13
CKLF-205ENST00000417030 ZNF652Q9Y2D9 606 aa28.35■■■□□ 2.13
CKLF-205ENST00000417030 GOLGB1Q14789 3259 aaKnown RBP28.35■■■□□ 2.13
CKLF-205ENST00000417030 DUSP27Q5VZP5 1158 aa28.34■■■□□ 2.13
CKLF-205ENST00000417030 WWC3Q9ULE0 1092 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms