RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
CPNE1-209ENST00000415920 MTHFSDQ2M296 383 aaKnown RBP17.92■□□□□ 0.46
CPNE1-209ENST00000415920 C1orf141Q5JVX7 400 aa17.92■□□□□ 0.46
CPNE1-209ENST00000415920 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
CPNE1-209ENST00000415920 RRP7AQ9Y3A4 280 aaKnown RBP17.92■□□□□ 0.46
CPNE1-209ENST00000415920 TGFB2P61812 414 aa17.91■□□□□ 0.46
CPNE1-209ENST00000415920 NFATC2IPQ8NCF5 419 aa17.91■□□□□ 0.46
CPNE1-209ENST00000415920 APAF1O14727 1248 aa17.9■□□□□ 0.46
CPNE1-209ENST00000415920 ADRA2BP18089 450 aa17.9■□□□□ 0.46
CPNE1-209ENST00000415920 KCNA3P22001 575 aa17.9■□□□□ 0.46
CPNE1-209ENST00000415920 RFC4P35249 363 aa17.9■□□□□ 0.46
CPNE1-209ENST00000415920 NFE2L2Q16236 605 aa17.9■□□□□ 0.46
CPNE1-209ENST00000415920 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
CPNE1-209ENST00000415920 DDR1Q08345 913 aa17.89■□□□□ 0.45
CPNE1-209ENST00000415920 FKBP8Q14318 412 aa17.89■□□□□ 0.45
CPNE1-209ENST00000415920 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
CPNE1-209ENST00000415920 MRC1P22897 1456 aa17.88■□□□□ 0.45
CPNE1-209ENST00000415920 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
CPNE1-209ENST00000415920 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
CPNE1-209ENST00000415920 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
CPNE1-209ENST00000415920 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
CPNE1-209ENST00000415920 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
CPNE1-209ENST00000415920 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
CPNE1-209ENST00000415920 IFFO2Q5TF58 517 aa17.87■□□□□ 0.45
CPNE1-209ENST00000415920 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
CPNE1-209ENST00000415920 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
CPNE1-209ENST00000415920 RIPK4P57078 832 aa17.86■□□□□ 0.45
CPNE1-209ENST00000415920 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
CPNE1-209ENST00000415920 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
CPNE1-209ENST00000415920 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
CPNE1-209ENST00000415920 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-209ENST00000415920 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
CPNE1-209ENST00000415920 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
CPNE1-209ENST00000415920 DNAJC10Q8IXB1 793 aa17.85■□□□□ 0.45
CPNE1-209ENST00000415920 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
CPNE1-209ENST00000415920 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
CPNE1-209ENST00000415920 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
CPNE1-209ENST00000415920 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
CPNE1-209ENST00000415920 CHRNA5P30532 468 aa17.84■□□□□ 0.45
CPNE1-209ENST00000415920 SLC39A6Q13433 755 aa17.83■□□□□ 0.44
CPNE1-209ENST00000415920 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
CPNE1-209ENST00000415920 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
CPNE1-209ENST00000415920 C9orf131Q5VYM1 1079 aa17.82■□□□□ 0.44
CPNE1-209ENST00000415920 MCM10Q7L590 875 aa17.82■□□□□ 0.44
CPNE1-209ENST00000415920 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
CPNE1-209ENST00000415920 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CPNE1-209ENST00000415920 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
CPNE1-209ENST00000415920 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
CPNE1-209ENST00000415920 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
CPNE1-209ENST00000415920 SBF1O95248 1867 aa17.8■□□□□ 0.44
CPNE1-209ENST00000415920 SOS1Q07889 1333 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-209ENST00000415920 TM4SF1P30408 202 aa17.8■□□□□ 0.44
CPNE1-209ENST00000415920 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
CPNE1-209ENST00000415920 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
CPNE1-209ENST00000415920 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
CPNE1-209ENST00000415920 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
CPNE1-209ENST00000415920 TOMM70O94826 608 aa17.79■□□□□ 0.44
CPNE1-209ENST00000415920 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
CPNE1-209ENST00000415920 CYP19A1P11511 503 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-209ENST00000415920 TEFQ10587 303 aa17.78■□□□□ 0.44
CPNE1-209ENST00000415920 DALRD3Q5D0E6 543 aaKnown RBP17.78■□□□□ 0.44
CPNE1-209ENST00000415920 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
CPNE1-209ENST00000415920 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
CPNE1-209ENST00000415920 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
CPNE1-209ENST00000415920 HTRA3P83110 453 aa17.77■□□□□ 0.44
CPNE1-209ENST00000415920 DNAJC5GQ8N7S2 189 aa17.77■□□□□ 0.44
CPNE1-209ENST00000415920 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
CPNE1-209ENST00000415920 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
CPNE1-209ENST00000415920 APLP1P51693 650 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 NFIXQ14938 502 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 NGEFQ8N5V2 710 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 IL17REQ8NFR9 667 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 COL15A1P39059 1388 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
CPNE1-209ENST00000415920 PRELPP51888 382 aa17.75■□□□□ 0.43
CPNE1-209ENST00000415920 RASSF7Q02833 373 aa17.75■□□□□ 0.43
CPNE1-209ENST00000415920 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
CPNE1-209ENST00000415920 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
CPNE1-209ENST00000415920 ZBED9Q6R2W3 1325 aa17.74■□□□□ 0.43
CPNE1-209ENST00000415920 ZPR1O75312 459 aa17.74■□□□□ 0.43
CPNE1-209ENST00000415920 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
CPNE1-209ENST00000415920 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
CPNE1-209ENST00000415920 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
CPNE1-209ENST00000415920 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
CPNE1-209ENST00000415920 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
CPNE1-209ENST00000415920 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
CPNE1-209ENST00000415920 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
CPNE1-209ENST00000415920 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
CPNE1-209ENST00000415920 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
CPNE1-209ENST00000415920 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
CPNE1-209ENST00000415920 CCDC88AQ3V6T2 1871 aa17.7■□□□□ 0.42
CPNE1-209ENST00000415920 SERPINB2P05120 415 aa17.7■□□□□ 0.42
CPNE1-209ENST00000415920 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
CPNE1-209ENST00000415920 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
CPNE1-209ENST00000415920 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
CPNE1-209ENST00000415920 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-209ENST00000415920 SCN7AQ01118 1682 aa17.68■□□□□ 0.42
CPNE1-209ENST00000415920 BTBD11A6QL63 1104 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms