RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 TM4SF1P30408 202 aa21.01■□□□□ 0.95
SBDSP1-201ENST00000415772 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
SBDSP1-201ENST00000415772 NARFQ9UHQ1 456 aa21.01■□□□□ 0.95
SBDSP1-201ENST00000415772 KIF7Q2M1P5 1343 aa21.01■□□□□ 0.95
SBDSP1-201ENST00000415772 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
SBDSP1-201ENST00000415772 CANXP27824 592 aaKnown RBP21■□□□□ 0.95
SBDSP1-201ENST00000415772 TEFQ10587 303 aa21■□□□□ 0.95
SBDSP1-201ENST00000415772 MTHFSDQ2M296 383 aaKnown RBP21■□□□□ 0.95
SBDSP1-201ENST00000415772 CEP350Q5VT06 3117 aa21■□□□□ 0.95
SBDSP1-201ENST00000415772 STARD3NLO95772 234 aa20.99■□□□□ 0.95
SBDSP1-201ENST00000415772 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
SBDSP1-201ENST00000415772 RBM46Q8TBY0 533 aaKnown RBP20.99■□□□□ 0.95
SBDSP1-201ENST00000415772 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
SBDSP1-201ENST00000415772 MRC1P22897 1456 aa20.99■□□□□ 0.95
SBDSP1-201ENST00000415772 ZNF330Q9Y3S2 320 aaPredicted RBP20.98■□□□□ 0.95
SBDSP1-201ENST00000415772 KCPQ6ZWJ8 1503 aa20.98■□□□□ 0.95
SBDSP1-201ENST00000415772 A0A087WZG4 1122 aa20.97■□□□□ 0.95
SBDSP1-201ENST00000415772 SERPINB2P05120 415 aa20.97■□□□□ 0.95
SBDSP1-201ENST00000415772 NFIXQ14938 502 aa20.97■□□□□ 0.95
SBDSP1-201ENST00000415772 NPHP1O15259 732 aa20.96■□□□□ 0.95
SBDSP1-201ENST00000415772 FSTL1Q12841 308 aa20.96■□□□□ 0.95
SBDSP1-201ENST00000415772 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
SBDSP1-201ENST00000415772 RRAGCQ9HB90 399 aa20.96■□□□□ 0.95
SBDSP1-201ENST00000415772 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
SBDSP1-201ENST00000415772 H0YIN7 160 aa20.95■□□□□ 0.94
SBDSP1-201ENST00000415772 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
SBDSP1-201ENST00000415772 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
SBDSP1-201ENST00000415772 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
SBDSP1-201ENST00000415772 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
SBDSP1-201ENST00000415772 TEX13AQ9BXU3 409 aaPredicted RBP20.94■□□□□ 0.94
SBDSP1-201ENST00000415772 GNAT3A8MTJ3 354 aa20.93■□□□□ 0.94
SBDSP1-201ENST00000415772 RASSF7Q02833 373 aa20.93■□□□□ 0.94
SBDSP1-201ENST00000415772 TNRC6CQ9HCJ0 1690 aaKnown RBP20.93■□□□□ 0.94
SBDSP1-201ENST00000415772 LMNB1P20700 586 aa20.92■□□□□ 0.94
SBDSP1-201ENST00000415772 ZC3H4Q9UPT8 1303 aaKnown RBP20.92■□□□□ 0.94
SBDSP1-201ENST00000415772 WDR90Q96KV7 1748 aa20.92■□□□□ 0.94
SBDSP1-201ENST00000415772 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
SBDSP1-201ENST00000415772 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
SBDSP1-201ENST00000415772 SMC1BQ8NDV3 1235 aa20.9■□□□□ 0.94
SBDSP1-201ENST00000415772 ZNF622Q969S3 477 aaKnown RBP eCLIP20.9■□□□□ 0.94
SBDSP1-201ENST00000415772 PER1O15534 1290 aaPredicted RBP20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 PDE6BP35913 854 aa20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
SBDSP1-201ENST00000415772 HEG1Q9ULI3 1381 aa20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 UBR2Q8IWV8 1755 aa20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 NRXN2Q9P2S2 1712 aa20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 DNAJC5GQ8N7S2 189 aa20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 ZNF496Q96IT1 587 aaPredicted RBP20.88■□□□□ 0.93
SBDSP1-201ENST00000415772 VEGFAP15692 232 aaPredicted RBP20.87■□□□□ 0.93
SBDSP1-201ENST00000415772 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
SBDSP1-201ENST00000415772 GLTPD2A6NH11 291 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 KLRG1Q96E93 195 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 TBC1D2BQ9UPU7 963 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 DLEC1Q9Y238 1755 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 SBF1O95248 1867 aa20.86■□□□□ 0.93
SBDSP1-201ENST00000415772 CARMIL3Q8ND23 1372 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 IL6STP40189 918 aaPredicted RBP20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 HTRA3P83110 453 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 IL17REQ8NFR9 667 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
SBDSP1-201ENST00000415772 ST5P78524 1137 aa20.84■□□□□ 0.93
SBDSP1-201ENST00000415772 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
SBDSP1-201ENST00000415772 BRIP1Q9BX63 1249 aa20.84■□□□□ 0.93
SBDSP1-201ENST00000415772 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
SBDSP1-201ENST00000415772 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
SBDSP1-201ENST00000415772 TIAM2Q8IVF5 1701 aa20.83■□□□□ 0.92
SBDSP1-201ENST00000415772 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
SBDSP1-201ENST00000415772 COL3A1P02461 1466 aaPredicted RBP20.82■□□□□ 0.92
SBDSP1-201ENST00000415772 C21orf2O43822 256 aa20.82■□□□□ 0.92
SBDSP1-201ENST00000415772 PRKAR2BP31323 418 aa20.82■□□□□ 0.92
SBDSP1-201ENST00000415772 CCDC24Q8N4L8 307 aa20.82■□□□□ 0.92
SBDSP1-201ENST00000415772 A1BGP04217 495 aa20.81■□□□□ 0.92
SBDSP1-201ENST00000415772 PRR5LQ6MZQ0 368 aa20.81■□□□□ 0.92
SBDSP1-201ENST00000415772 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
SBDSP1-201ENST00000415772 NFKBIEO00221 500 aa20.8■□□□□ 0.92
SBDSP1-201ENST00000415772 ERFEQ4G0M1 354 aa20.8■□□□□ 0.92
SBDSP1-201ENST00000415772 CNKSR1Q969H4 720 aa20.79■□□□□ 0.92
SBDSP1-201ENST00000415772 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
SBDSP1-201ENST00000415772 U2AF1L5P0DN76 240 aaPredicted RBP20.78■□□□□ 0.92
SBDSP1-201ENST00000415772 U2AF1Q01081 240 aaKnown RBP eCLIP20.78■□□□□ 0.92
SBDSP1-201ENST00000415772 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
SBDSP1-201ENST00000415772 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.92
SBDSP1-201ENST00000415772 NEFMP07197 916 aa20.77■□□□□ 0.92
SBDSP1-201ENST00000415772 TAOK3Q9H2K8 898 aa20.77■□□□□ 0.92
SBDSP1-201ENST00000415772 CEMIPQ8WUJ3 1361 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 CCDC88AQ3V6T2 1871 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 CAMTA2O94983 1202 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 PRELPP51888 382 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 NBPF5PQ86XG9 351 aaPredicted RBP20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 JMYQ8N9B5 988 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 PHACTR3Q96KR7 559 aa20.76■□□□□ 0.91
SBDSP1-201ENST00000415772 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms