RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
LRCH3-202ENST00000414675 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
LRCH3-202ENST00000414675 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
LRCH3-202ENST00000414675 SALL3Q9BXA9 1300 aa19.03■□□□□ 0.64
LRCH3-202ENST00000414675 PDE1AP54750 535 aa19.02■□□□□ 0.64
LRCH3-202ENST00000414675 SSH3Q8TE77 659 aa19.02■□□□□ 0.63
LRCH3-202ENST00000414675 LRRCC1Q9C099 1032 aa19.02■□□□□ 0.63
LRCH3-202ENST00000414675 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 PDIA6Q15084 440 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 TSHZ3Q63HK5 1081 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
LRCH3-202ENST00000414675 MRC1P22897 1456 aa19■□□□□ 0.63
LRCH3-202ENST00000414675 ABCA3Q99758 1704 aa19■□□□□ 0.63
LRCH3-202ENST00000414675 POLA2Q14181 598 aa19■□□□□ 0.63
LRCH3-202ENST00000414675 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
LRCH3-202ENST00000414675 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
LRCH3-202ENST00000414675 FRAT2O75474 233 aaPredicted RBP18.99■□□□□ 0.63
LRCH3-202ENST00000414675 KSR2Q6VAB6 950 aa18.99■□□□□ 0.63
LRCH3-202ENST00000414675 DDX21Q9NR30 783 aaKnown RBP eCLIP18.99■□□□□ 0.63
LRCH3-202ENST00000414675 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
LRCH3-202ENST00000414675 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
LRCH3-202ENST00000414675 HYPKQ9NX55 129 aa18.98■□□□□ 0.63
LRCH3-202ENST00000414675 PLEKHG2Q9H7P9 1386 aa18.98■□□□□ 0.63
LRCH3-202ENST00000414675 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
LRCH3-202ENST00000414675 COL5A2P05997 1499 aaPredicted RBP18.97■□□□□ 0.63
LRCH3-202ENST00000414675 CWF19L2Q2TBE0 894 aaKnown RBP18.97■□□□□ 0.63
LRCH3-202ENST00000414675 SRGAP3O43295 1099 aa18.96■□□□□ 0.63
LRCH3-202ENST00000414675 AIMP1Q12904 312 aaKnown RBP18.96■□□□□ 0.63
LRCH3-202ENST00000414675 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
LRCH3-202ENST00000414675 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
LRCH3-202ENST00000414675 MX1P20591 662 aa18.95■□□□□ 0.62
LRCH3-202ENST00000414675 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
LRCH3-202ENST00000414675 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
LRCH3-202ENST00000414675 SURF6O75683 361 aaKnown RBP18.95■□□□□ 0.62
LRCH3-202ENST00000414675 ALDH1L1O75891 902 aa18.95■□□□□ 0.62
LRCH3-202ENST00000414675 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
LRCH3-202ENST00000414675 SNX21Q969T3 373 aa18.95■□□□□ 0.62
LRCH3-202ENST00000414675 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
LRCH3-202ENST00000414675 GLI3P10071 1580 aa18.94■□□□□ 0.62
LRCH3-202ENST00000414675 NHSL1Q5SYE7 1610 aa18.94■□□□□ 0.62
LRCH3-202ENST00000414675 MYL6BP14649 208 aa18.94■□□□□ 0.62
LRCH3-202ENST00000414675 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
LRCH3-202ENST00000414675 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
LRCH3-202ENST00000414675 STAP2Q9UGK3 403 aa18.93■□□□□ 0.62
LRCH3-202ENST00000414675 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-202ENST00000414675 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
LRCH3-202ENST00000414675 CABP4P57796 275 aa18.92■□□□□ 0.62
LRCH3-202ENST00000414675 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-202ENST00000414675 RAB11FIP3O75154 756 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 TTC5Q8N0Z6 440 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 LINS1Q8NG48 757 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 RHPN1Q8TCX5 695 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
LRCH3-202ENST00000414675 IGKV5-2P06315 115 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 MTX1Q13505 466 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
LRCH3-202ENST00000414675 LTBP4Q8N2S1 1624 aa18.9■□□□□ 0.62
LRCH3-202ENST00000414675 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
LRCH3-202ENST00000414675 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
LRCH3-202ENST00000414675 KAZALD1Q96I82 304 aa18.9■□□□□ 0.62
LRCH3-202ENST00000414675 CASC1Q6TDU7 716 aa18.9■□□□□ 0.62
LRCH3-202ENST00000414675 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
LRCH3-202ENST00000414675 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
LRCH3-202ENST00000414675 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
LRCH3-202ENST00000414675 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 SUCLG2Q96I99 432 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 STRN4Q9NRL3 753 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 GRM8O00222 908 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 RIC3Q7Z5B4 369 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 UTYO14607 1347 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 PCDH11XQ9BZA7 1347 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 PCDH11YQ9BZA8 1340 aa18.89■□□□□ 0.61
LRCH3-202ENST00000414675 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
LRCH3-202ENST00000414675 ERC2O15083 957 aa18.88■□□□□ 0.61
LRCH3-202ENST00000414675 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
LRCH3-202ENST00000414675 LAMB4A4D0S4 1761 aa18.87■□□□□ 0.61
LRCH3-202ENST00000414675 PA2G4Q9UQ80 394 aaKnown RBP18.87■□□□□ 0.61
LRCH3-202ENST00000414675 AOX1Q06278 1338 aa18.87■□□□□ 0.61
LRCH3-202ENST00000414675 IL2RBP14784 551 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 DDIT3P35638 169 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 RILPL2Q969X0 211 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 TRIM6-TRIM34B2RNG4 842 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 PI4K2BQ8TCG2 481 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
LRCH3-202ENST00000414675 MYD88Q99836 296 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 BICC1Q9H694 974 aaKnown RBP18.85■□□□□ 0.61
LRCH3-202ENST00000414675 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 REC8O95072 547 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 CHMLP26374 656 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 ESYT1Q9BSJ8 1104 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 METTL22Q9BUU2 404 aaPredicted RBP18.85■□□□□ 0.61
LRCH3-202ENST00000414675 CHMP5Q9NZZ3 219 aa18.85■□□□□ 0.61
LRCH3-202ENST00000414675 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms