RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 PA2G4Q9UQ80 394 aaKnown RBP25.44■■□□□ 1.66
SPRN-201ENST00000414069 NEK4P51957 841 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 KIAA1211Q6ZU35 1233 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 FAM13BQ9NYF5 915 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 PALD1Q9ULE6 856 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 NCLP19338 710 aaKnown RBP25.43■■□□□ 1.66
SPRN-201ENST00000414069 DNAAF4Q8WXU2 420 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 ARHGEF25Q86VW2 580 aa25.43■■□□□ 1.66
SPRN-201ENST00000414069 PRDM4Q9UKN5 801 aa25.42■■□□□ 1.66
SPRN-201ENST00000414069 SOS1Q07889 1333 aaPredicted RBP25.42■■□□□ 1.66
SPRN-201ENST00000414069 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
SPRN-201ENST00000414069 RABEP1Q15276 862 aa25.41■■□□□ 1.66
SPRN-201ENST00000414069 RNMTO43148 476 aaKnown RBP25.41■■□□□ 1.66
SPRN-201ENST00000414069 C9orf78Q9NZ63 289 aaPredicted RBP25.41■■□□□ 1.66
SPRN-201ENST00000414069 REC8O95072 547 aa25.4■■□□□ 1.66
SPRN-201ENST00000414069 DDIT3P35638 169 aa25.4■■□□□ 1.66
SPRN-201ENST00000414069 PRDM10Q9NQV6 1147 aa25.4■■□□□ 1.66
SPRN-201ENST00000414069 ZHX1Q9UKY1 873 aaPredicted RBP25.4■■□□□ 1.66
SPRN-201ENST00000414069 HSPA2P54652 639 aa25.4■■□□□ 1.66
SPRN-201ENST00000414069 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
SPRN-201ENST00000414069 RAB3GAP1Q15042 981 aa25.39■■□□□ 1.66
SPRN-201ENST00000414069 PXDNQ92626 1479 aa25.39■■□□□ 1.65
SPRN-201ENST00000414069 MCTP1Q6DN14 999 aa25.38■■□□□ 1.65
SPRN-201ENST00000414069 FSD2A1L4K1 749 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 SIL1Q9H173 461 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 FGD1P98174 961 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 GBP4Q96PP9 640 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 DDX54Q8TDD1 881 aaKnown RBP25.37■■□□□ 1.65
SPRN-201ENST00000414069 RGPD2P0DJD1 1756 aa25.37■■□□□ 1.65
SPRN-201ENST00000414069 BEND3Q5T5X7 828 aa25.36■■□□□ 1.65
SPRN-201ENST00000414069 RHPN1Q8TCX5 695 aa25.36■■□□□ 1.65
SPRN-201ENST00000414069 IBTKQ9P2D0 1353 aaPredicted RBP25.36■■□□□ 1.65
SPRN-201ENST00000414069 KLHDC4Q8TBB5 520 aa25.36■■□□□ 1.65
SPRN-201ENST00000414069 ESYT1Q9BSJ8 1104 aa25.36■■□□□ 1.65
SPRN-201ENST00000414069 GRPEL1Q9HAV7 217 aa25.36■■□□□ 1.65
SPRN-201ENST00000414069 DDX11L8A8MPP1 907 aa25.35■■□□□ 1.65
SPRN-201ENST00000414069 ST18O60284 1047 aa25.35■■□□□ 1.65
SPRN-201ENST00000414069 LTN1O94822 1766 aa25.35■■□□□ 1.65
SPRN-201ENST00000414069 NPHP4O75161 1426 aaPredicted RBP25.35■■□□□ 1.65
SPRN-201ENST00000414069 NFATC2IPQ8NCF5 419 aa25.35■■□□□ 1.65
SPRN-201ENST00000414069 CHMLP26374 656 aa25.35■■□□□ 1.65
SPRN-201ENST00000414069 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
SPRN-201ENST00000414069 CEMIPQ8WUJ3 1361 aa25.34■■□□□ 1.65
SPRN-201ENST00000414069 RAPGEF4Q8WZA2 1011 aa25.34■■□□□ 1.65
SPRN-201ENST00000414069 NCOA3Q9Y6Q9 1424 aa25.33■■□□□ 1.65
SPRN-201ENST00000414069 GIGYF1O75420 1035 aaPredicted RBP25.33■■□□□ 1.65
SPRN-201ENST00000414069 MRE11P49959 708 aa25.33■■□□□ 1.65
SPRN-201ENST00000414069 MARF1Q9Y4F3 1742 aaKnown RBP25.33■■□□□ 1.65
SPRN-201ENST00000414069 ATF3P18847 181 aa25.32■■□□□ 1.64
SPRN-201ENST00000414069 CWC27Q6UX04 472 aaKnown RBP25.32■■□□□ 1.64
SPRN-201ENST00000414069 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
SPRN-201ENST00000414069 SSH3Q8TE77 659 aa25.32■■□□□ 1.64
SPRN-201ENST00000414069 DBF4Q9UBU7 674 aaPredicted RBP25.32■■□□□ 1.64
SPRN-201ENST00000414069 TPM2P07951 284 aa25.31■■□□□ 1.64
SPRN-201ENST00000414069 DDX49Q9Y6V7 483 aaKnown RBP25.31■■□□□ 1.64
SPRN-201ENST00000414069 ADCY9O60503 1353 aa25.31■■□□□ 1.64
SPRN-201ENST00000414069 GAS2L3Q86XJ1 694 aa25.3■■□□□ 1.64
SPRN-201ENST00000414069 SALL3Q9BXA9 1300 aa25.3■■□□□ 1.64
SPRN-201ENST00000414069 OSBPL3Q9H4L5 887 aa25.3■■□□□ 1.64
SPRN-201ENST00000414069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.3■■□□□ 1.64
SPRN-201ENST00000414069 BAG4O95429 457 aaKnown RBP25.3■■□□□ 1.64
SPRN-201ENST00000414069 CPA1P15085 419 aa25.3■■□□□ 1.64
SPRN-201ENST00000414069 AMOTQ4VCS5 1084 aa25.29■■□□□ 1.64
SPRN-201ENST00000414069 PDE4CQ08493 712 aa25.28■■□□□ 1.64
SPRN-201ENST00000414069 NFAT5O94916 1531 aa25.28■■□□□ 1.64
SPRN-201ENST00000414069 RIC3Q7Z5B4 369 aa25.28■■□□□ 1.64
SPRN-201ENST00000414069 CIZ1Q9ULV3 898 aaPredicted RBP25.28■■□□□ 1.64
SPRN-201ENST00000414069 C19orf44Q9H6X5 657 aa25.27■■□□□ 1.64
SPRN-201ENST00000414069 CCDC8Q9H0W5 538 aaPredicted RBP25.27■■□□□ 1.64
SPRN-201ENST00000414069 ERBB3P21860 1342 aa25.26■■□□□ 1.63
SPRN-201ENST00000414069 TMX3Q96JJ7 454 aa25.26■■□□□ 1.63
SPRN-201ENST00000414069 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
SPRN-201ENST00000414069 KIF1BPQ96EK5 621 aa25.25■■□□□ 1.63
SPRN-201ENST00000414069 PRPF40AO75400 957 aaKnown RBP25.24■■□□□ 1.63
SPRN-201ENST00000414069 SUCLG2Q96I99 432 aa25.24■■□□□ 1.63
SPRN-201ENST00000414069 USP16Q9Y5T5 823 aa25.24■■□□□ 1.63
SPRN-201ENST00000414069 ATP5J2-PTCD1G3V325 749 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 PTCD1O75127 700 aaKnown RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 ZNF496Q96IT1 587 aaPredicted RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 R3HCC1Q9Y3T6 440 aaKnown RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 GOLGA6L22H0YM25 854 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 CAVIN1Q6NZI2 390 aaKnown RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 PI4K2BQ8TCG2 481 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 BICC1Q9H694 974 aaKnown RBP25.23■■□□□ 1.63
SPRN-201ENST00000414069 BABAM1Q9NWV8 329 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 NDUFB9Q9Y6M9 179 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 COPS6Q7L5N1 327 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 XAGE3Q8WTP9 111 aa25.23■■□□□ 1.63
SPRN-201ENST00000414069 ZNF790Q6PG37 636 aa25.22■■□□□ 1.63
SPRN-201ENST00000414069 AACSQ86V21 672 aa25.22■■□□□ 1.63
SPRN-201ENST00000414069 MYD88Q99836 296 aa25.22■■□□□ 1.63
SPRN-201ENST00000414069 RBM27Q9P2N5 1060 aaKnown RBP25.22■■□□□ 1.63
SPRN-201ENST00000414069 TMEM94Q12767 1356 aa25.22■■□□□ 1.63
SPRN-201ENST00000414069 MCCP23508 829 aa25.22■■□□□ 1.63
SPRN-201ENST00000414069 POLA2Q14181 598 aa25.21■■□□□ 1.63
SPRN-201ENST00000414069 ZNF330Q9Y3S2 320 aaPredicted RBP25.21■■□□□ 1.63
SPRN-201ENST00000414069 GDPD2Q9HCC8 539 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms