RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CDCA7LQ96GN5 454 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 CRELD1Q96HD1 420 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 TRPC6Q9Y210 931 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 ZNF500O60304 480 aaPredicted RBP7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 CD53P19397 219 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 NOS2P35228 1153 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 CAPN12Q6ZSI9 719 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 PHTF2Q8N3S3 785 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 APPBP2Q92624 585 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
CBX1P3-201ENST00000413296 IFRD1O00458 451 aaPredicted RBP7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 GCGRP47871 477 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 PTPN12Q05209 780 aaKnown RBP7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 POU5F1BQ06416 359 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 AAMPQ13685 434 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 BRD3Q15059 726 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 VPS72Q15906 364 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 HS2ST1Q7LGA3 356 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 ZNF512BQ96KM6 892 aaPredicted RBP7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 NEUROD4Q9HD90 331 aa7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 MAP3K20Q9NYL2 800 aaKnown RBP7.53□□□□□ -1.2
CBX1P3-201ENST00000413296 LGR5O75473 907 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 RGS20O76081 388 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 KRT18P05783 430 aaKnown RBP7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 GNA15P30679 374 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 PAK2Q13177 524 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 RAVER1Q8IY67 606 aaKnown RBP7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 TPCN2Q8NHX9 752 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 PPM1EQ8WY54 764 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 HINFPQ9BQA5 517 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 TMEM134Q9H6X4 195 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 SNTG2Q9NY99 539 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 MYO15BQ96JP2 1530 aa7.52□□□□□ -1.21
CBX1P3-201ENST00000413296 CFAP69A5D8W1 941 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 ZBTB24O43167 697 aaPredicted RBP7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 ANP32CO43423 234 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 SSBP05455 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 CTSHP09668 335 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 MPSTP25325 297 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 EXOSC10Q01780 885 aaKnown RBP7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 NAA30Q147X3 362 aaPredicted RBP7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 PPP2R5AQ15172 486 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 SYCP2LQ5T4T6 812 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 CCDC102BQ68D86 513 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 PPP4R4Q6NUP7 873 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 TRAF7Q6Q0C0 670 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 SH3TC2Q8TF17 1288 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 GPRASP2Q96D09 838 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 SLC39A13Q96H72 371 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 JPH4Q96JJ6 628 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 DEPDC7Q96QD5 511 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 TRIM55Q9BYV6 548 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 CHIC2Q9UKJ5 165 aa7.51□□□□□ -1.21
CBX1P3-201ENST00000413296 FOSP01100 380 aaPredicted RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 FGAP02671 866 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 PTMAP06454 111 aaKnown RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 WEE1P30291 646 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 MAN1A1P33908 653 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 USP5P45974 858 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 MASP1P48740 699 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 TTC39BQ5VTQ0 682 aaPredicted RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 KIAA0907Q7Z7F0 614 aaPredicted RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 HOMER1Q86YM7 354 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 PGBD3Q8N328 593 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 PDCD7Q8N8D1 485 aaKnown RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 ZNF408Q9H9D4 720 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 AVENQ9NQS1 362 aaPredicted RBP7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 SCINQ9Y6U3 715 aa7.5□□□□□ -1.21
CBX1P3-201ENST00000413296 NRDCO43847 1150 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 IGHA2P01877 340 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 GTF2IP78347 998 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 TMEM92Q6UXU6 159 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 ALKBH8Q96BT7 664 aaKnown RBP7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 PHF12Q96QT6 1004 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 ARPC5LQ9BPX5 153 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 PAGR1Q9BTK6 254 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 NRBP1Q9UHY1 535 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 ANAPC4Q9UJX5 808 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 AK5Q9Y6K8 562 aa7.49□□□□□ -1.21
CBX1P3-201ENST00000413296 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 GPR182O15218 404 aa7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 TSPAN6O43657 245 aa7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 MYL1P05976 194 aa7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 MZF1P28698 734 aaPredicted RBP7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 COPB2P35606 906 aa7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
CBX1P3-201ENST00000413296 RASA3Q14644 834 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms