RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 RPS6KA4O75676 772 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 HOXB7P09629 217 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 SNRPA1P09661 255 aaKnown RBP10.74□□□□□ -0.69
RPE-204ENST00000411934 CRKLP46109 303 aaKnown RBP10.74□□□□□ -0.69
RPE-204ENST00000411934 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 RTCBQ9Y3I0 505 aaKnown RBP10.74□□□□□ -0.69
RPE-204ENST00000411934 C4AP0C0L4 1744 aa10.74□□□□□ -0.69
RPE-204ENST00000411934 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
RPE-204ENST00000411934 CHL1O00533 1208 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 GNPATO15228 680 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 CYP19A1P11511 503 aaPredicted RBP10.73□□□□□ -0.69
RPE-204ENST00000411934 KCNQ4P56696 695 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 GNAI1P63096 354 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 DNAJC10Q8IXB1 793 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 SPON1Q9HCB6 807 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 TSPYL4Q9UJ04 414 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 RRP7AQ9Y3A4 280 aaKnown RBP10.73□□□□□ -0.69
RPE-204ENST00000411934 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
RPE-204ENST00000411934 RGL2O15211 777 aa10.72□□□□□ -0.69
RPE-204ENST00000411934 ZNF853P0CG23 659 aa10.72□□□□□ -0.69
RPE-204ENST00000411934 EIF4A1P60842 406 aaKnown RBP10.72□□□□□ -0.69
RPE-204ENST00000411934 FAM9BQ8IZU0 186 aa10.72□□□□□ -0.69
RPE-204ENST00000411934 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
RPE-204ENST00000411934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
RPE-204ENST00000411934 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.69
RPE-204ENST00000411934 COL15A1P39059 1388 aa10.71□□□□□ -0.69
RPE-204ENST00000411934 IL6STP40189 918 aaPredicted RBP10.71□□□□□ -0.69
RPE-204ENST00000411934 SCN7AQ01118 1682 aa10.71□□□□□ -0.69
RPE-204ENST00000411934 WDR63Q8IWG1 891 aa10.71□□□□□ -0.69
RPE-204ENST00000411934 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
RPE-204ENST00000411934 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
RPE-204ENST00000411934 A0A087WZG4 1122 aa10.7□□□□□ -0.7
RPE-204ENST00000411934 KCNQ3O43525 872 aa10.7□□□□□ -0.7
RPE-204ENST00000411934 TRAPPC3LQ5T215 181 aa10.7□□□□□ -0.7
RPE-204ENST00000411934 INTS5Q6P9B9 1019 aaKnown RBP10.7□□□□□ -0.7
RPE-204ENST00000411934 COL23A1Q86Y22 540 aaPredicted RBP10.7□□□□□ -0.7
RPE-204ENST00000411934 ZNF219Q9P2Y4 722 aaPredicted RBP10.7□□□□□ -0.7
RPE-204ENST00000411934 BCORQ6W2J9 1755 aa10.7□□□□□ -0.7
RPE-204ENST00000411934 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
RPE-204ENST00000411934 ZBTB1Q9Y2K1 713 aa10.69□□□□□ -0.7
RPE-204ENST00000411934 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
RPE-204ENST00000411934 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
RPE-204ENST00000411934 POLD1P28340 1107 aa10.68□□□□□ -0.7
RPE-204ENST00000411934 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
RPE-204ENST00000411934 NPM2Q86SE8 214 aaKnown RBP10.68□□□□□ -0.7
RPE-204ENST00000411934 MBIPQ9NS73 344 aa10.68□□□□□ -0.7
RPE-204ENST00000411934 PHF14O94880 888 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 RFC4P35249 363 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 PTGER2P43116 358 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 MIER1Q8N108 512 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
RPE-204ENST00000411934 MIS18AQ9NYP9 233 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 USP16Q9Y5T5 823 aa10.67□□□□□ -0.7
RPE-204ENST00000411934 ZBTB7AO95365 584 aa10.66□□□□□ -0.7
RPE-204ENST00000411934 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
RPE-204ENST00000411934 MYH16Q9H6N6 1097 aa10.66□□□□□ -0.7
RPE-204ENST00000411934 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
RPE-204ENST00000411934 ZPR1O75312 459 aa10.65□□□□□ -0.7
RPE-204ENST00000411934 GYS1P13807 737 aa10.65□□□□□ -0.7
RPE-204ENST00000411934 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
RPE-204ENST00000411934 PRAMEF22A3QJZ6 481 aa10.64□□□□□ -0.71
RPE-204ENST00000411934 A1BGP04217 495 aa10.64□□□□□ -0.71
RPE-204ENST00000411934 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
RPE-204ENST00000411934 CLEC4GQ6UXB4 293 aa10.64□□□□□ -0.71
RPE-204ENST00000411934 ZNF652Q9Y2D9 606 aa10.64□□□□□ -0.71
RPE-204ENST00000411934 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
RPE-204ENST00000411934 KIF13BQ9NQT8 1826 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 NBPF26B4DH59 902 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 ERVV-1B6SEH8 477 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 E9PSI1 815 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 DUSP27Q5VZP5 1158 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
RPE-204ENST00000411934 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 ARXQ96QS3 562 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 DDX21Q9NR30 783 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPE-204ENST00000411934 DBF4Q9UBU7 674 aaPredicted RBP10.63□□□□□ -0.71
RPE-204ENST00000411934 PPP1R1BQ9UD71 204 aaPredicted RBP10.63□□□□□ -0.71
RPE-204ENST00000411934 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
RPE-204ENST00000411934 C10orf71Q711Q0 1435 aa10.62□□□□□ -0.71
RPE-204ENST00000411934 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
RPE-204ENST00000411934 HAX1O00165 279 aa10.62□□□□□ -0.71
RPE-204ENST00000411934 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
RPE-204ENST00000411934 LRP10Q7Z4F1 713 aa10.62□□□□□ -0.71
RPE-204ENST00000411934 DZIP3Q86Y13 1208 aaKnown RBP10.62□□□□□ -0.71
RPE-204ENST00000411934 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
RPE-204ENST00000411934 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
RPE-204ENST00000411934 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 PDIA6Q15084 440 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 CCDC30Q5VVM6 783 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 USPL1Q5W0Q7 1092 aa10.61□□□□□ -0.71
RPE-204ENST00000411934 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms