RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 TJP1Q07157 1748 aa8.37□□□□□ -1.07
HMGN1P20-201ENST00000411849 CNTNAP4Q9C0A0 1308 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 ZC3H4Q9UPT8 1303 aaKnown RBP8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 SCN11AQ9UI33 1791 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 GYS1P13807 737 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 PHKG2P15735 406 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
HMGN1P20-201ENST00000411849 ADAMTS7Q9UKP4 1686 aa8.35□□□□□ -1.07
HMGN1P20-201ENST00000411849 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
HMGN1P20-201ENST00000411849 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
HMGN1P20-201ENST00000411849 KCNA3P22001 575 aa8.35□□□□□ -1.07
HMGN1P20-201ENST00000411849 CDCA8Q53HL2 280 aa8.35□□□□□ -1.07
HMGN1P20-201ENST00000411849 NRXN2Q9P2S2 1712 aa8.34□□□□□ -1.07
HMGN1P20-201ENST00000411849 WASHC2AQ641Q2 1341 aa8.34□□□□□ -1.07
HMGN1P20-201ENST00000411849 ERVV-2B6SEH9 535 aa8.34□□□□□ -1.07
HMGN1P20-201ENST00000411849 HSP90AB1P08238 724 aaKnown RBP8.34□□□□□ -1.07
HMGN1P20-201ENST00000411849 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
HMGN1P20-201ENST00000411849 KDM6AO15550 1401 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 VEGFAP15692 232 aaPredicted RBP8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 CACNA1SQ13698 1873 aa8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 FER1L6Q2WGJ9 1857 aa8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 EYA1Q99502 592 aa8.33□□□□□ -1.08
HMGN1P20-201ENST00000411849 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
HMGN1P20-201ENST00000411849 LMNB1P20700 586 aa8.32□□□□□ -1.08
HMGN1P20-201ENST00000411849 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
HMGN1P20-201ENST00000411849 GLTPD2A6NH11 291 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 CHRNA5P30532 468 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 CRKLP46109 303 aaKnown RBP8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 CABP4P57796 275 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 DDR1Q08345 913 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 FKBP8Q14318 412 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 SCN4AP35499 1836 aa8.31□□□□□ -1.08
HMGN1P20-201ENST00000411849 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 ANKRD31Q8N7Z5 1873 aa8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 ZPR1O75312 459 aa8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 CARD14Q9BXL6 1004 aa8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 SRP68Q9UHB9 627 aaKnown RBP8.3□□□□□ -1.08
HMGN1P20-201ENST00000411849 POLRMTO00411 1230 aaKnown RBP8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 TM4SF1P30408 202 aa8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 RASSF7Q02833 373 aa8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 EIF4A2Q14240 407 aaKnown RBP8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 AMOTQ4VCS5 1084 aa8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 POLKQ9UBT6 870 aa8.29□□□□□ -1.08
HMGN1P20-201ENST00000411849 MTHFSP49914 203 aa8.28□□□□□ -1.08
HMGN1P20-201ENST00000411849 C1orf141Q5JVX7 400 aa8.28□□□□□ -1.08
HMGN1P20-201ENST00000411849 TTLL6Q8N841 843 aa8.28□□□□□ -1.08
HMGN1P20-201ENST00000411849 COL11A2P13942 1736 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P20-201ENST00000411849 UBR2Q8IWV8 1755 aa8.27□□□□□ -1.08
HMGN1P20-201ENST00000411849 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
HMGN1P20-201ENST00000411849 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
HMGN1P20-201ENST00000411849 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P20-201ENST00000411849 SCN7AQ01118 1682 aa8.27□□□□□ -1.09
HMGN1P20-201ENST00000411849 H0YIN7 160 aa8.26□□□□□ -1.09
HMGN1P20-201ENST00000411849 USPL1Q5W0Q7 1092 aa8.26□□□□□ -1.09
HMGN1P20-201ENST00000411849 LHX8Q68G74 356 aa8.26□□□□□ -1.09
HMGN1P20-201ENST00000411849 INTS5Q6P9B9 1019 aaKnown RBP8.26□□□□□ -1.09
HMGN1P20-201ENST00000411849 SOS1Q07889 1333 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P20-201ENST00000411849 COL15A1P39059 1388 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 CD44P16070 742 aaKnown RBP8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 NFIXQ14938 502 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 ERFEQ4G0M1 354 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 C2CD5Q86YS7 1000 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 NARFQ9UHQ1 456 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
HMGN1P20-201ENST00000411849 SLX4Q8IY92 1834 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 POTECB2RU33 542 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 NFKBIEO00221 500 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 SLC34A2O95436 690 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 SERPINB2P05120 415 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 DNAJC10Q8IXB1 793 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 MRC1P22897 1456 aa8.24□□□□□ -1.09
HMGN1P20-201ENST00000411849 CNTNAP1P78357 1384 aa8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 BCORQ6W2J9 1755 aa8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 IQCA1LA6NCM1 817 aa8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 FOXN1O15353 648 aa8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 CTCFP49711 727 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 LTBP3Q9NS15 1303 aa8.23□□□□□ -1.09
HMGN1P20-201ENST00000411849 TRPM7Q96QT4 1865 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 PDE6BP35913 854 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 SOGA3Q5TF21 947 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 TAOK3Q9H2K8 898 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 PCNTO95613 3336 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 SIPA1L3O60292 1781 aaPredicted RBP8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
HMGN1P20-201ENST00000411849 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms