RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 KCNQ3O43525 872 aa23.99■■□□□ 1.43
RFC4-203ENST00000411792 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
RFC4-203ENST00000411792 NLGN2Q8NFZ4 835 aa23.99■■□□□ 1.43
RFC4-203ENST00000411792 THUMPD2Q9BTF0 503 aaKnown RBP23.99■■□□□ 1.43
RFC4-203ENST00000411792 YY1P25490 414 aa23.98■■□□□ 1.43
RFC4-203ENST00000411792 NPM2Q86SE8 214 aaKnown RBP23.98■■□□□ 1.43
RFC4-203ENST00000411792 NLGN1Q8N2Q7 840 aa23.98■■□□□ 1.43
RFC4-203ENST00000411792 RRP7AQ9Y3A4 280 aaKnown RBP23.98■■□□□ 1.43
RFC4-203ENST00000411792 SNRPA1P09661 255 aaKnown RBP23.97■■□□□ 1.43
RFC4-203ENST00000411792 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
RFC4-203ENST00000411792 MRS2Q9HD23 443 aa23.97■■□□□ 1.43
RFC4-203ENST00000411792 ZBTB1Q9Y2K1 713 aa23.97■■□□□ 1.43
RFC4-203ENST00000411792 ZPR1O75312 459 aa23.96■■□□□ 1.43
RFC4-203ENST00000411792 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
RFC4-203ENST00000411792 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
RFC4-203ENST00000411792 MYH14Q7Z406 1995 aaKnown RBP23.96■■□□□ 1.43
RFC4-203ENST00000411792 DLG5Q8TDM6 1919 aa23.96■■□□□ 1.43
RFC4-203ENST00000411792 COL15A1P39059 1388 aa23.94■■□□□ 1.42
RFC4-203ENST00000411792 USP42Q9H9J4 1324 aaKnown RBP23.94■■□□□ 1.42
RFC4-203ENST00000411792 MMP10P09238 476 aa23.93■■□□□ 1.42
RFC4-203ENST00000411792 GYS1P13807 737 aa23.93■■□□□ 1.42
RFC4-203ENST00000411792 TSPYL4Q9UJ04 414 aa23.93■■□□□ 1.42
RFC4-203ENST00000411792 ZNF330Q9Y3S2 320 aaPredicted RBP23.93■■□□□ 1.42
RFC4-203ENST00000411792 CD2APQ9Y5K6 639 aa23.93■■□□□ 1.42
RFC4-203ENST00000411792 A0A087WZG4 1122 aa23.92■■□□□ 1.42
RFC4-203ENST00000411792 CCDC184Q52MB2 194 aa23.92■■□□□ 1.42
RFC4-203ENST00000411792 SRP68Q9UHB9 627 aaKnown RBP23.91■■□□□ 1.42
RFC4-203ENST00000411792 APAF1O14727 1248 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 A1BGP04217 495 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 IL6STP40189 918 aaPredicted RBP23.89■■□□□ 1.41
RFC4-203ENST00000411792 BABAM1Q9NWV8 329 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 NARFQ9UHQ1 456 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 USP16Q9Y5T5 823 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 PARP3Q9Y6F1 533 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 C4AP0C0L4 1744 aa23.89■■□□□ 1.41
RFC4-203ENST00000411792 EIF5P55010 431 aaKnown RBP23.88■■□□□ 1.41
RFC4-203ENST00000411792 USPL1Q5W0Q7 1092 aa23.88■■□□□ 1.41
RFC4-203ENST00000411792 PRAMEF22A3QJZ6 481 aa23.87■■□□□ 1.41
RFC4-203ENST00000411792 EIF4A1P60842 406 aaKnown RBP23.87■■□□□ 1.41
RFC4-203ENST00000411792 FKBP8Q14318 412 aa23.87■■□□□ 1.41
RFC4-203ENST00000411792 TRIM35Q9UPQ4 493 aa23.86■■□□□ 1.41
RFC4-203ENST00000411792 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
RFC4-203ENST00000411792 GIGYF1O75420 1035 aaPredicted RBP23.85■■□□□ 1.41
RFC4-203ENST00000411792 CALD1Q05682 793 aaKnown RBP23.85■■□□□ 1.41
RFC4-203ENST00000411792 WWC3Q9ULE0 1092 aa23.85■■□□□ 1.41
RFC4-203ENST00000411792 KDM3BQ7LBC6 1761 aa23.85■■□□□ 1.41
RFC4-203ENST00000411792 GRIN3BO60391 1043 aa23.82■■□□□ 1.4
RFC4-203ENST00000411792 YBX3P16989 372 aaKnown RBP eCLIP23.82■■□□□ 1.43e-10■■□□□ 11.5
RFC4-203ENST00000411792 PIP4K2AP48426 406 aaPredicted RBP23.82■■□□□ 1.4
RFC4-203ENST00000411792 TBC1D2BQ9UPU7 963 aa23.82■■□□□ 1.4
RFC4-203ENST00000411792 CHD4Q14839 1912 aa23.81■■□□□ 1.4
RFC4-203ENST00000411792 DZIP3Q86Y13 1208 aaKnown RBP23.81■■□□□ 1.4
RFC4-203ENST00000411792 CHL1O00533 1208 aa23.79■■□□□ 1.4
RFC4-203ENST00000411792 TM4SF1P30408 202 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 DDR1Q08345 913 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 NFIXQ14938 502 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 CFAP44Q96MT7 982 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 ZNF652Q9Y2D9 606 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
RFC4-203ENST00000411792 NBPF26B4DH59 902 aa23.77■■□□□ 1.4
RFC4-203ENST00000411792 NBPF10Q6P3W6 841 aaKnown RBP23.77■■□□□ 1.4
RFC4-203ENST00000411792 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
RFC4-203ENST00000411792 NBPF15Q8N660 670 aa23.77■■□□□ 1.4
RFC4-203ENST00000411792 BCL2L12Q9HB09 334 aa23.77■■□□□ 1.4
RFC4-203ENST00000411792 C10orf71Q711Q0 1435 aa23.76■■□□□ 1.39
RFC4-203ENST00000411792 POLRMTO00411 1230 aaKnown RBP23.76■■□□□ 1.39
RFC4-203ENST00000411792 ERBB4Q15303 1308 aa23.76■■□□□ 1.39
RFC4-203ENST00000411792 A0A0G2JLW4 131 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 CAMTA2O94983 1202 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 EIF2S2P20042 333 aaKnown RBP23.75■■□□□ 1.39
RFC4-203ENST00000411792 TGFB2P61812 414 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 GNAI1P63096 354 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 FAM9BQ8IZU0 186 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
RFC4-203ENST00000411792 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
RFC4-203ENST00000411792 SCN7AQ01118 1682 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 NPHP1O15259 732 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 SERPINB2P05120 415 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 MYL6BP14649 208 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 TBC1D9BQ66K14 1250 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 KIF6Q6ZMV9 814 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 SETDB2Q96T68 719 aa23.73■■□□□ 1.39
RFC4-203ENST00000411792 DPEP1P16444 411 aa23.72■■□□□ 1.39
RFC4-203ENST00000411792 CCDC27Q2M243 656 aa23.72■■□□□ 1.39
RFC4-203ENST00000411792 CLEC4GQ6UXB4 293 aa23.72■■□□□ 1.39
RFC4-203ENST00000411792 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
RFC4-203ENST00000411792 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
RFC4-203ENST00000411792 N4BP2Q86UW6 1770 aaPredicted RBP23.72■■□□□ 1.39
RFC4-203ENST00000411792 KIF13BQ9NQT8 1826 aa23.71■■□□□ 1.39
RFC4-203ENST00000411792 CARMIL3Q8ND23 1372 aa23.71■■□□□ 1.39
RFC4-203ENST00000411792 SENP3-EIF4A1A0A087X0R7 540 aa23.7■■□□□ 1.38
RFC4-203ENST00000411792 RGL2O15211 777 aa23.7■■□□□ 1.38
RFC4-203ENST00000411792 HOXB7P09629 217 aa23.7■■□□□ 1.38
RFC4-203ENST00000411792 ZNF784Q8NCA9 323 aaPredicted RBP23.7■■□□□ 1.38
RFC4-203ENST00000411792 BCS1LQ9Y276 419 aa23.7■■□□□ 1.38
RFC4-203ENST00000411792 UTRNP46939 3433 aa23.7■■□□□ 1.38
RFC4-203ENST00000411792 NECTIN2Q92692 538 aa23.69■■□□□ 1.38
RFC4-203ENST00000411792 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
RFC4-203ENST00000411792 KRT24Q2M2I5 525 aa23.68■■□□□ 1.38
RFC4-203ENST00000411792 NCBP3Q53F19 620 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms