RNA–Protein interactions for RNA: ENST00000410064.5

PTMA-205, Transcript of prothymosin alpha, humanhuman

TSL 2 BASIC

Gene PTMA, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-205ENST00000410064 LAMB4A4D0S4 1761 aa29.44■■■□□ 2.3
PTMA-205ENST00000410064 ZNF316A6NFI3 1004 aaPredicted RBP29.43■■■□□ 2.3
PTMA-205ENST00000410064 SRP68Q9UHB9 627 aaKnown RBP29.43■■■□□ 2.3
PTMA-205ENST00000410064 USP42Q9H9J4 1324 aaKnown RBP29.43■■■□□ 2.3
PTMA-205ENST00000410064 COL15A1P39059 1388 aa29.42■■■□□ 2.3
PTMA-205ENST00000410064 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.32e-17■■■□□ 15.8
PTMA-205ENST00000410064 TEX13AQ9BXU3 409 aaPredicted RBP29.42■■■□□ 2.3
PTMA-205ENST00000410064 N4BP2Q86UW6 1770 aaPredicted RBP29.41■■■□□ 2.3
PTMA-205ENST00000410064 AFDNP55196 1824 aaKnown RBP29.41■■■□□ 2.3
PTMA-205ENST00000410064 CANXP27824 592 aaKnown RBP29.4■■■□□ 2.3
PTMA-205ENST00000410064 TAF7Q15545 349 aaPredicted RBP29.4■■■□□ 2.3
PTMA-205ENST00000410064 GPR162Q16538 588 aa29.39■■■□□ 2.3
PTMA-205ENST00000410064 PELP1Q8IZL8 1130 aaKnown RBP29.39■■■□□ 2.3
PTMA-205ENST00000410064 KIAA1551Q9HCM1 1747 aa29.39■■■□□ 2.3
PTMA-205ENST00000410064 SCN7AQ01118 1682 aa29.38■■■□□ 2.29
PTMA-205ENST00000410064 ZPR1O75312 459 aa29.38■■■□□ 2.29
PTMA-205ENST00000410064 THUMPD2Q9BTF0 503 aaKnown RBP29.37■■■□□ 2.29
PTMA-205ENST00000410064 FKBP8Q14318 412 aa29.36■■■□□ 2.29
PTMA-205ENST00000410064 CCDC146Q8IYE0 955 aa29.36■■■□□ 2.29
PTMA-205ENST00000410064 BCORQ6W2J9 1755 aa29.35■■■□□ 2.29
PTMA-205ENST00000410064 USPL1Q5W0Q7 1092 aa29.35■■■□□ 2.29
PTMA-205ENST00000410064 PARP3Q9Y6F1 533 aa29.35■■■□□ 2.29
PTMA-205ENST00000410064 RIPK4P57078 832 aa29.34■■■□□ 2.29
PTMA-205ENST00000410064 MIS18AQ9NYP9 233 aa29.34■■■□□ 2.29
PTMA-205ENST00000410064 NARFQ9UHQ1 456 aa29.34■■■□□ 2.29
PTMA-205ENST00000410064 BRCA1P38398 1863 aaKnown RBP29.34■■■□□ 2.29
PTMA-205ENST00000410064 SNRPA1P09661 255 aaKnown RBP29.33■■■□□ 2.29
PTMA-205ENST00000410064 TMPOP42166 694 aaKnown RBP29.33■■■□□ 2.29
PTMA-205ENST00000410064 PNISRQ8TF01 805 aaKnown RBP29.33■■■□□ 2.29
PTMA-205ENST00000410064 C10orf71Q711Q0 1435 aa29.32■■■□□ 2.28
PTMA-205ENST00000410064 YY1P25490 414 aa29.32■■■□□ 2.28
PTMA-205ENST00000410064 EIF5P55010 431 aaKnown RBP29.32■■■□□ 2.28
PTMA-205ENST00000410064 ADAMTS8Q9UP79 889 aa29.32■■■□□ 2.28
PTMA-205ENST00000410064 ZNF330Q9Y3S2 320 aaPredicted RBP29.32■■■□□ 2.28
PTMA-205ENST00000410064 A0A087WZG4 1122 aa29.31■■■□□ 2.28
PTMA-205ENST00000410064 PRAMEF22A3QJZ6 481 aa29.31■■■□□ 2.28
PTMA-205ENST00000410064 A1BGP04217 495 aa29.31■■■□□ 2.28
PTMA-205ENST00000410064 RUNDC1Q96C34 613 aa29.31■■■□□ 2.28
PTMA-205ENST00000410064 USP16Q9Y5T5 823 aa29.31■■■□□ 2.28
PTMA-205ENST00000410064 LMOD3Q0VAK6 560 aa29.3■■■□□ 2.28
PTMA-205ENST00000410064 RRP7AQ9Y3A4 280 aaKnown RBP29.3■■■□□ 2.28
PTMA-205ENST00000410064 NRXN2Q9P2S2 1712 aa29.29■■■□□ 2.28
PTMA-205ENST00000410064 IL6STP40189 918 aaPredicted RBP29.29■■■□□ 2.28
PTMA-205ENST00000410064 DDR1Q08345 913 aa29.29■■■□□ 2.28
PTMA-205ENST00000410064 YBX3P16989 372 aaKnown RBP eCLIP29.27■■■□□ 2.28
PTMA-205ENST00000410064 NEUROD2Q15784 382 aa29.27■■■□□ 2.28
PTMA-205ENST00000410064 NPM2Q86SE8 214 aaKnown RBP29.27■■■□□ 2.28
PTMA-205ENST00000410064 PXDNLA1KZ92 1463 aa29.27■■■□□ 2.28
PTMA-205ENST00000410064 BCL2L12Q9HB09 334 aa29.26■■■□□ 2.27
PTMA-205ENST00000410064 TM4SF1P30408 202 aa29.25■■■□□ 2.27
PTMA-205ENST00000410064 PIP4K2AP48426 406 aaPredicted RBP29.25■■■□□ 2.27
PTMA-205ENST00000410064 GOLGB1Q14789 3259 aaKnown RBP29.24■■■□□ 2.27
PTMA-205ENST00000410064 POLRMTO00411 1230 aaKnown RBP29.24■■■□□ 2.27
PTMA-205ENST00000410064 TBC1D2BQ9UPU7 963 aa29.24■■■□□ 2.27
PTMA-205ENST00000410064 ARFGEF1Q9Y6D6 1849 aa29.23■■■□□ 2.27
PTMA-205ENST00000410064 NFIXQ14938 502 aa29.23■■■□□ 2.27
PTMA-205ENST00000410064 WWC3Q9ULE0 1092 aa29.23■■■□□ 2.27
PTMA-205ENST00000410064 GRIN3BO60391 1043 aa29.22■■■□□ 2.27
PTMA-205ENST00000410064 EIF4A1P60842 406 aaKnown RBP29.22■■■□□ 2.27
PTMA-205ENST00000410064 TSPYL4Q9UJ04 414 aa29.22■■■□□ 2.27
PTMA-205ENST00000410064 UTRNP46939 3433 aa29.22■■■□□ 2.27
PTMA-205ENST00000410064 TGFB2P61812 414 aa29.21■■■□□ 2.27
PTMA-205ENST00000410064 NUP98P52948 1817 aa29.21■■■□□ 2.27
PTMA-205ENST00000410064 ANP32CO43423 234 aa29.2■■■□□ 2.26
PTMA-205ENST00000410064 DLEC1Q9Y238 1755 aa29.2■■■□□ 2.26
PTMA-205ENST00000410064 ANKRD31Q8N7Z5 1873 aa29.19■■■□□ 2.26
PTMA-205ENST00000410064 GIGYF1O75420 1035 aaPredicted RBP29.19■■■□□ 2.26
PTMA-205ENST00000410064 A0A0G2JLW4 131 aa29.18■■■□□ 2.26
PTMA-205ENST00000410064 CCDC184Q52MB2 194 aa29.18■■■□□ 2.26
PTMA-205ENST00000410064 BICDL1Q6ZP65 573 aa29.18■■■□□ 2.26
PTMA-205ENST00000410064 DZIP3Q86Y13 1208 aaKnown RBP29.18■■■□□ 2.26
PTMA-205ENST00000410064 TRIM35Q9UPQ4 493 aa29.18■■■□□ 2.26
PTMA-205ENST00000410064 NBPF26B4DH59 902 aa29.17■■■□□ 2.26
PTMA-205ENST00000410064 NBPF10Q6P3W6 841 aaKnown RBP29.17■■■□□ 2.26
PTMA-205ENST00000410064 NBPF15Q8N660 670 aa29.17■■■□□ 2.26
PTMA-205ENST00000410064 BABAM1Q9NWV8 329 aa29.17■■■□□ 2.26
PTMA-205ENST00000410064 CAMTA2O94983 1202 aa29.16■■■□□ 2.26
PTMA-205ENST00000410064 DPEP1P16444 411 aa29.16■■■□□ 2.26
PTMA-205ENST00000410064 SERPINB2P05120 415 aa29.15■■■□□ 2.26
PTMA-205ENST00000410064 TBC1D9BQ66K14 1250 aa29.15■■■□□ 2.26
PTMA-205ENST00000410064 APAF1O14727 1248 aa29.13■■■□□ 2.25
PTMA-205ENST00000410064 CACNA1SQ13698 1873 aa29.12■■■□□ 2.25
PTMA-205ENST00000410064 LAS1LQ9Y4W2 734 aaKnown RBP29.12■■■□□ 2.25
PTMA-205ENST00000410064 CARMIL3Q8ND23 1372 aa29.12■■■□□ 2.25
PTMA-205ENST00000410064 MRS2Q9HD23 443 aa29.1■■■□□ 2.25
PTMA-205ENST00000410064 BCS1LQ9Y276 419 aa29.1■■■□□ 2.25
PTMA-205ENST00000410064 COL11A2P13942 1736 aaPredicted RBP29.09■■■□□ 2.25
PTMA-205ENST00000410064 SETDB2Q96T68 719 aa29.09■■■□□ 2.25
PTMA-205ENST00000410064 ZNF652Q9Y2D9 606 aa29.09■■■□□ 2.25
PTMA-205ENST00000410064 CHL1O00533 1208 aa29.08■■■□□ 2.25
PTMA-205ENST00000410064 CHRNA5P30532 468 aa29.08■■■□□ 2.25
PTMA-205ENST00000410064 KCNA3P22001 575 aa29.07■■■□□ 2.24
PTMA-205ENST00000410064 CLEC4GQ6UXB4 293 aa29.07■■■□□ 2.24
PTMA-205ENST00000410064 NGEFQ8N5V2 710 aa29.07■■■□□ 2.24
PTMA-205ENST00000410064 ERBB4Q15303 1308 aa29.06■■■□□ 2.24
PTMA-205ENST00000410064 MYL6BP14649 208 aa29.06■■■□□ 2.24
PTMA-205ENST00000410064 PIM2Q9P1W9 311 aa29.06■■■□□ 2.24
PTMA-205ENST00000410064 EIF2S2P20042 333 aaKnown RBP29.05■■■□□ 2.24
PTMA-205ENST00000410064 ANKRD36CQ5JPF3 1778 aa29.04■■■□□ 2.24
PTMA-205ENST00000410064 SBF1O95248 1867 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms