RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
GYPC-203ENST00000409836 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
GYPC-203ENST00000409836 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
GYPC-203ENST00000409836 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
GYPC-203ENST00000409836 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
GYPC-203ENST00000409836 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
GYPC-203ENST00000409836 COL15A1P39059 1388 aa18.35■□□□□ 0.53
GYPC-203ENST00000409836 STARD3NLO95772 234 aa18.35■□□□□ 0.53
GYPC-203ENST00000409836 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
GYPC-203ENST00000409836 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
GYPC-203ENST00000409836 ZBTB7AO95365 584 aa18.34■□□□□ 0.53
GYPC-203ENST00000409836 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
GYPC-203ENST00000409836 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
GYPC-203ENST00000409836 NRXN2Q9P2S2 1712 aa18.34■□□□□ 0.53
GYPC-203ENST00000409836 IL16Q14005 1332 aa18.33■□□□□ 0.53
GYPC-203ENST00000409836 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
GYPC-203ENST00000409836 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.52
GYPC-203ENST00000409836 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
GYPC-203ENST00000409836 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
GYPC-203ENST00000409836 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
GYPC-203ENST00000409836 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
GYPC-203ENST00000409836 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
GYPC-203ENST00000409836 HOXB7P09629 217 aa18.31■□□□□ 0.52
GYPC-203ENST00000409836 IL6STP40189 918 aaPredicted RBP18.31■□□□□ 0.52
GYPC-203ENST00000409836 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
GYPC-203ENST00000409836 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
GYPC-203ENST00000409836 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
GYPC-203ENST00000409836 RGL2O15211 777 aa18.3■□□□□ 0.52
GYPC-203ENST00000409836 PHF14O94880 888 aa18.3■□□□□ 0.52
GYPC-203ENST00000409836 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
GYPC-203ENST00000409836 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
GYPC-203ENST00000409836 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
GYPC-203ENST00000409836 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
GYPC-203ENST00000409836 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
GYPC-203ENST00000409836 GYS1P13807 737 aa18.28■□□□□ 0.52
GYPC-203ENST00000409836 GNAI1P63096 354 aa18.28■□□□□ 0.52
GYPC-203ENST00000409836 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
GYPC-203ENST00000409836 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
GYPC-203ENST00000409836 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
GYPC-203ENST00000409836 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
GYPC-203ENST00000409836 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
GYPC-203ENST00000409836 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
GYPC-203ENST00000409836 RFC4P35249 363 aa18.26■□□□□ 0.51
GYPC-203ENST00000409836 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
GYPC-203ENST00000409836 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 A0A087WZG4 1122 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 A1BGP04217 495 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 POLD1P28340 1107 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
GYPC-203ENST00000409836 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
GYPC-203ENST00000409836 C10orf71Q711Q0 1435 aa18.24■□□□□ 0.51
GYPC-203ENST00000409836 NUP98P52948 1817 aa18.24■□□□□ 0.51
GYPC-203ENST00000409836 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
GYPC-203ENST00000409836 ARXQ96QS3 562 aa18.24■□□□□ 0.51
GYPC-203ENST00000409836 ANKRD36CQ5JPF3 1778 aa18.24■□□□□ 0.51
GYPC-203ENST00000409836 BRCA1P38398 1863 aaKnown RBP18.23■□□□□ 0.51
GYPC-203ENST00000409836 MSH5O43196 834 aa18.23■□□□□ 0.51
GYPC-203ENST00000409836 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
GYPC-203ENST00000409836 MIER1Q8N108 512 aa18.23■□□□□ 0.51
GYPC-203ENST00000409836 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
GYPC-203ENST00000409836 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
GYPC-203ENST00000409836 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
GYPC-203ENST00000409836 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
GYPC-203ENST00000409836 CAMTA2O94983 1202 aa18.21■□□□□ 0.51
GYPC-203ENST00000409836 PDIA6Q15084 440 aa18.21■□□□□ 0.51
GYPC-203ENST00000409836 ZPR1O75312 459 aa18.2■□□□□ 0.5
GYPC-203ENST00000409836 FKBP8Q14318 412 aa18.2■□□□□ 0.5
GYPC-203ENST00000409836 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
GYPC-203ENST00000409836 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
GYPC-203ENST00000409836 MMP10P09238 476 aa18.19■□□□□ 0.5
GYPC-203ENST00000409836 TM4SF1P30408 202 aa18.19■□□□□ 0.5
GYPC-203ENST00000409836 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
GYPC-203ENST00000409836 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
GYPC-203ENST00000409836 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
GYPC-203ENST00000409836 ARFGEF2Q9Y6D5 1785 aa18.18■□□□□ 0.5
GYPC-203ENST00000409836 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
GYPC-203ENST00000409836 CLEC4GQ6UXB4 293 aa18.18■□□□□ 0.5
GYPC-203ENST00000409836 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
GYPC-203ENST00000409836 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
GYPC-203ENST00000409836 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
GYPC-203ENST00000409836 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
GYPC-203ENST00000409836 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
GYPC-203ENST00000409836 POLRMTO00411 1230 aaKnown RBP18.17■□□□□ 0.5
GYPC-203ENST00000409836 DDR1Q08345 913 aa18.17■□□□□ 0.5
GYPC-203ENST00000409836 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
GYPC-203ENST00000409836 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
GYPC-203ENST00000409836 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
GYPC-203ENST00000409836 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
GYPC-203ENST00000409836 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
GYPC-203ENST00000409836 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
GYPC-203ENST00000409836 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
GYPC-203ENST00000409836 NFIXQ14938 502 aa18.15■□□□□ 0.5
GYPC-203ENST00000409836 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
GYPC-203ENST00000409836 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
GYPC-203ENST00000409836 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
GYPC-203ENST00000409836 MAP3K15Q6ZN16 1313 aa18.15■□□□□ 0.5
GYPC-203ENST00000409836 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
GYPC-203ENST00000409836 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms