RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 RTF1Q92541 710 aaKnown RBP19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 UTRNP46939 3433 aa19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 CEMIPQ8WUJ3 1361 aa19.35■□□□□ 0.69
NIF3L1-205ENST00000409588 DNAJC10Q8IXB1 793 aa19.35■□□□□ 0.69
NIF3L1-205ENST00000409588 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
NIF3L1-205ENST00000409588 ZPR1O75312 459 aa19.34■□□□□ 0.69
NIF3L1-205ENST00000409588 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
NIF3L1-205ENST00000409588 USP42Q9H9J4 1324 aaKnown RBP19.32■□□□□ 0.68
NIF3L1-205ENST00000409588 ZBTB22O15209 634 aa19.32■□□□□ 0.68
NIF3L1-205ENST00000409588 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
NIF3L1-205ENST00000409588 CHD4Q14839 1912 aa19.31■□□□□ 0.68
NIF3L1-205ENST00000409588 A0A087WZG4 1122 aa19.31■□□□□ 0.68
NIF3L1-205ENST00000409588 BTBD11A6QL63 1104 aa19.31■□□□□ 0.68
NIF3L1-205ENST00000409588 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
NIF3L1-205ENST00000409588 MYH14Q7Z406 1995 aaKnown RBP19.31■□□□□ 0.68
NIF3L1-205ENST00000409588 SOS1Q07889 1333 aaPredicted RBP19.3■□□□□ 0.68
NIF3L1-205ENST00000409588 YBX3P16989 372 aaKnown RBP eCLIP19.3■□□□□ 0.684e-6■□□□□ 11.2
NIF3L1-205ENST00000409588 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
NIF3L1-205ENST00000409588 HEG1Q9ULI3 1381 aa19.3■□□□□ 0.68
NIF3L1-205ENST00000409588 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
NIF3L1-205ENST00000409588 TJP1Q07157 1748 aa19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 TM4SF1P30408 202 aa19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 ZNF784Q8NCA9 323 aaPredicted RBP19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
NIF3L1-205ENST00000409588 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
NIF3L1-205ENST00000409588 FKBP8Q14318 412 aa19.27■□□□□ 0.68
NIF3L1-205ENST00000409588 IL6STP40189 918 aaPredicted RBP19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 TAF7Q15545 349 aaPredicted RBP19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
NIF3L1-205ENST00000409588 COL15A1P39059 1388 aa19.25■□□□□ 0.67
NIF3L1-205ENST00000409588 ZEB1P37275 1124 aaPredicted RBP19.25■□□□□ 0.67
NIF3L1-205ENST00000409588 USPL1Q5W0Q7 1092 aa19.25■□□□□ 0.67
NIF3L1-205ENST00000409588 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
NIF3L1-205ENST00000409588 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
NIF3L1-205ENST00000409588 UBR2Q8IWV8 1755 aa19.24■□□□□ 0.67
NIF3L1-205ENST00000409588 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
NIF3L1-205ENST00000409588 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
NIF3L1-205ENST00000409588 MCM10Q7L590 875 aa19.24■□□□□ 0.67
NIF3L1-205ENST00000409588 C10orf71Q711Q0 1435 aa19.23■□□□□ 0.67
NIF3L1-205ENST00000409588 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
NIF3L1-205ENST00000409588 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
NIF3L1-205ENST00000409588 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
NIF3L1-205ENST00000409588 NFE2L2Q16236 605 aa19.22■□□□□ 0.67
NIF3L1-205ENST00000409588 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
NIF3L1-205ENST00000409588 SIPA1L3O60292 1781 aaPredicted RBP19.21■□□□□ 0.67
NIF3L1-205ENST00000409588 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
NIF3L1-205ENST00000409588 A0A0G2JLW4 131 aa19.21■□□□□ 0.67
NIF3L1-205ENST00000409588 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
NIF3L1-205ENST00000409588 RGL2O15211 777 aa19.2■□□□□ 0.66
NIF3L1-205ENST00000409588 DDR1Q08345 913 aa19.2■□□□□ 0.66
NIF3L1-205ENST00000409588 DPEP1P16444 411 aa19.19■□□□□ 0.66
NIF3L1-205ENST00000409588 NFIXQ14938 502 aa19.19■□□□□ 0.66
NIF3L1-205ENST00000409588 PDZRN3Q9UPQ7 1066 aa19.19■□□□□ 0.66
NIF3L1-205ENST00000409588 PXDNLA1KZ92 1463 aa19.19■□□□□ 0.66
NIF3L1-205ENST00000409588 KCNQ3O43525 872 aa19.18■□□□□ 0.66
NIF3L1-205ENST00000409588 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
NIF3L1-205ENST00000409588 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
NIF3L1-205ENST00000409588 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
NIF3L1-205ENST00000409588 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
NIF3L1-205ENST00000409588 A1BGP04217 495 aa19.17■□□□□ 0.66
NIF3L1-205ENST00000409588 SERPINB2P05120 415 aa19.17■□□□□ 0.66
NIF3L1-205ENST00000409588 KCNA3P22001 575 aa19.17■□□□□ 0.66
NIF3L1-205ENST00000409588 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
NIF3L1-205ENST00000409588 BCS1LQ9Y276 419 aa19.17■□□□□ 0.66
NIF3L1-205ENST00000409588 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
NIF3L1-205ENST00000409588 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
NIF3L1-205ENST00000409588 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
NIF3L1-205ENST00000409588 TBC1D2BQ9UPU7 963 aa19.14■□□□□ 0.65
NIF3L1-205ENST00000409588 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
NIF3L1-205ENST00000409588 RIPK4P57078 832 aa19.13■□□□□ 0.65
NIF3L1-205ENST00000409588 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
NIF3L1-205ENST00000409588 ZNF330Q9Y3S2 320 aaPredicted RBP19.13■□□□□ 0.65
NIF3L1-205ENST00000409588 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
NIF3L1-205ENST00000409588 ARHGAP27Q6ZUM4 889 aa19.12■□□□□ 0.65
NIF3L1-205ENST00000409588 PIP4P2Q8N4L2 257 aa19.12■□□□□ 0.65
NIF3L1-205ENST00000409588 BRIP1Q9BX63 1249 aa19.12■□□□□ 0.65
NIF3L1-205ENST00000409588 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
NIF3L1-205ENST00000409588 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 H0YIN7 160 aa19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 PDE6BP35913 854 aa19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 TBC1D9BQ66K14 1250 aa19.11■□□□□ 0.65
NIF3L1-205ENST00000409588 TMPOP42166 694 aaKnown RBP19.1■□□□□ 0.65
NIF3L1-205ENST00000409588 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
NIF3L1-205ENST00000409588 MIS18AQ9NYP9 233 aa19.1■□□□□ 0.65
NIF3L1-205ENST00000409588 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
NIF3L1-205ENST00000409588 KIAA1551Q9HCM1 1747 aa19.09■□□□□ 0.65
NIF3L1-205ENST00000409588 BICDL1Q6ZP65 573 aa19.09■□□□□ 0.65
NIF3L1-205ENST00000409588 GPBP1L1Q9HC44 474 aaPredicted RBP19.09■□□□□ 0.65
NIF3L1-205ENST00000409588 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
NIF3L1-205ENST00000409588 ADCY9O60503 1353 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms