RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TMEM2Q9UHN6 1383 aa16.21■□□□□ 0.18
COL6A2-204ENST00000409416 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.18
COL6A2-204ENST00000409416 GNAI3P08754 354 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-204ENST00000409416 SYCE3A1L190 88 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
COL6A2-204ENST00000409416 ZSCAN23Q3MJ62 389 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 TTC5Q8N0Z6 440 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 PTPRCP08575 1304 aa16.2■□□□□ 0.18
COL6A2-204ENST00000409416 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
COL6A2-204ENST00000409416 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
COL6A2-204ENST00000409416 ATF3P18847 181 aa16.19■□□□□ 0.18
COL6A2-204ENST00000409416 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
COL6A2-204ENST00000409416 RAB11FIP4Q86YS3 637 aa16.19■□□□□ 0.18
COL6A2-204ENST00000409416 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
COL6A2-204ENST00000409416 MYD88Q99836 296 aa16.18■□□□□ 0.18
COL6A2-204ENST00000409416 LRRC2Q9BYS8 371 aa16.18■□□□□ 0.18
COL6A2-204ENST00000409416 AATKQ6ZMQ8 1374 aa16.18■□□□□ 0.18
COL6A2-204ENST00000409416 CCDC173Q0VFZ6 552 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 G3BP1Q13283 466 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL6A2-204ENST00000409416 PRPF40BQ6NWY9 871 aaKnown RBP16.17■□□□□ 0.18
COL6A2-204ENST00000409416 NECAB1Q8N987 351 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 ISY1Q9ULR0 285 aaKnown RBP16.17■□□□□ 0.18
COL6A2-204ENST00000409416 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
COL6A2-204ENST00000409416 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 FSD1Q9BTV5 496 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 ZBTB3Q9H5J0 574 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 GCP02774 474 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 CLASRPQ8N2M8 674 aaKnown RBP16.17■□□□□ 0.18
COL6A2-204ENST00000409416 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
COL6A2-204ENST00000409416 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
COL6A2-204ENST00000409416 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
COL6A2-204ENST00000409416 RBSNQ9H1K0 784 aa16.16■□□□□ 0.18
COL6A2-204ENST00000409416 EVA1CP58658 441 aa16.16■□□□□ 0.18
COL6A2-204ENST00000409416 GORABQ5T7V8 394 aa16.16■□□□□ 0.18
COL6A2-204ENST00000409416 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
COL6A2-204ENST00000409416 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 FAM173BQ6P4H8 233 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 SNRKQ9NRH2 765 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
COL6A2-204ENST00000409416 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
COL6A2-204ENST00000409416 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 ESYT1Q9BSJ8 1104 aa16.15■□□□□ 0.18
COL6A2-204ENST00000409416 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
COL6A2-204ENST00000409416 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
COL6A2-204ENST00000409416 CHGBP05060 677 aa16.14■□□□□ 0.17
COL6A2-204ENST00000409416 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
COL6A2-204ENST00000409416 FLT4P35916 1363 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 AXIN2Q9Y2T1 843 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
COL6A2-204ENST00000409416 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-204ENST00000409416 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
COL6A2-204ENST00000409416 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
COL6A2-204ENST00000409416 ZDHHC9Q9Y397 364 aa16.12■□□□□ 0.17
COL6A2-204ENST00000409416 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
COL6A2-204ENST00000409416 IL25Q9H293 177 aa16.12■□□□□ 0.17
COL6A2-204ENST00000409416 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
COL6A2-204ENST00000409416 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
COL6A2-204ENST00000409416 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
COL6A2-204ENST00000409416 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
COL6A2-204ENST00000409416 GOLGA6L4A6NEF3 574 aa16.11■□□□□ 0.17
COL6A2-204ENST00000409416 CHMLP26374 656 aa16.1■□□□□ 0.17
COL6A2-204ENST00000409416 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
COL6A2-204ENST00000409416 GPTP24298 496 aa16.1■□□□□ 0.17
COL6A2-204ENST00000409416 CHST3Q7LGC8 479 aa16.1■□□□□ 0.17
COL6A2-204ENST00000409416 RGS12O14924 1447 aa16.1■□□□□ 0.17
COL6A2-204ENST00000409416 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
COL6A2-204ENST00000409416 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 CABP4P57796 275 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 CAMK4Q16566 473 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 TFIP11Q9UBB9 837 aaKnown RBP16.09■□□□□ 0.17
COL6A2-204ENST00000409416 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
COL6A2-204ENST00000409416 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.17
COL6A2-204ENST00000409416 ZNF830Q96NB3 372 aaPredicted RBP16.08■□□□□ 0.16
COL6A2-204ENST00000409416 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 CNTROBQ8N137 903 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
COL6A2-204ENST00000409416 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
COL6A2-204ENST00000409416 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL6A2-204ENST00000409416 TLR7Q9NYK1 1049 aaKnown RBP16.07■□□□□ 0.16
COL6A2-204ENST00000409416 PDE4CQ08493 712 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms