RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 IFNL2Q8IZJ0 200 aa15.28■□□□□ 0.04
ATG9A-203ENST00000409033 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
ATG9A-203ENST00000409033 PIP4K2BP78356 416 aa15.27■□□□□ 0.04
ATG9A-203ENST00000409033 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
ATG9A-203ENST00000409033 DNAJC2Q99543 621 aaKnown RBP15.27■□□□□ 0.04
ATG9A-203ENST00000409033 C3P01024 1663 aa15.27■□□□□ 0.04
ATG9A-203ENST00000409033 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.03
ATG9A-203ENST00000409033 ZNF496Q96IT1 587 aaPredicted RBP15.27■□□□□ 0.03
ATG9A-203ENST00000409033 ATP8B2P98198 1209 aa15.27■□□□□ 0.03
ATG9A-203ENST00000409033 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
ATG9A-203ENST00000409033 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
ATG9A-203ENST00000409033 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
ATG9A-203ENST00000409033 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
ATG9A-203ENST00000409033 CRB1P82279 1406 aa15.25■□□□□ 0.03
ATG9A-203ENST00000409033 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
ATG9A-203ENST00000409033 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
ATG9A-203ENST00000409033 USP16Q9Y5T5 823 aa15.25■□□□□ 0.03
ATG9A-203ENST00000409033 ZNF335Q9H4Z2 1342 aaPredicted RBP15.25■□□□□ 0.03
ATG9A-203ENST00000409033 SSFA2P28290 1259 aa15.25■□□□□ 0.03
ATG9A-203ENST00000409033 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
ATG9A-203ENST00000409033 RGPD8O14715 1765 aaPredicted RBP15.24■□□□□ 0.03
ATG9A-203ENST00000409033 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
ATG9A-203ENST00000409033 DDX49Q9Y6V7 483 aaKnown RBP15.24■□□□□ 0.03
ATG9A-203ENST00000409033 TRAK2O60296 914 aa15.24■□□□□ 0.03
ATG9A-203ENST00000409033 ERBB3P21860 1342 aa15.24■□□□□ 0.03
ATG9A-203ENST00000409033 MCM4P33991 863 aa15.24■□□□□ 0.03
ATG9A-203ENST00000409033 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
ATG9A-203ENST00000409033 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
ATG9A-203ENST00000409033 RABEP1Q15276 862 aa15.23■□□□□ 0.03
ATG9A-203ENST00000409033 NDUFB9Q9Y6M9 179 aa15.23■□□□□ 0.03
ATG9A-203ENST00000409033 A0A087WZG4 1122 aa15.23■□□□□ 0.03
ATG9A-203ENST00000409033 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
ATG9A-203ENST00000409033 ANKARQ7Z5J8 1434 aa15.23■□□□□ 0.03
ATG9A-203ENST00000409033 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
ATG9A-203ENST00000409033 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
ATG9A-203ENST00000409033 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
ATG9A-203ENST00000409033 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 GOLGA6L3A6NEY3 463 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 GPTP24298 496 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 HSP90AB4PQ58FF6 505 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 ANKRD13DQ6ZTN6 518 aa15.21■□□□□ 0.03
ATG9A-203ENST00000409033 TNPO1Q92973 898 aaKnown RBP15.21■□□□□ 0.03
ATG9A-203ENST00000409033 BICC1Q9H694 974 aaKnown RBP15.21■□□□□ 0.03
ATG9A-203ENST00000409033 GRM8O00222 908 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 FOSBP53539 338 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
ATG9A-203ENST00000409033 A1BGP04217 495 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 LARP1Q6PKG0 1096 aaKnown RBP15.2■□□□□ 0.02
ATG9A-203ENST00000409033 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
ATG9A-203ENST00000409033 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 KDRP35968 1356 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
ATG9A-203ENST00000409033 CHAMP1Q96JM3 812 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 ARHGAP23Q9P227 1491 aa15.2■□□□□ 0.02
ATG9A-203ENST00000409033 ANKRD26Q9UPS8 1709 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 CPA1P15085 419 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 TCEANC2Q96MN5 208 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
ATG9A-203ENST00000409033 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
ATG9A-203ENST00000409033 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
ATG9A-203ENST00000409033 PHKG2P15735 406 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 SLIT1O75093 1534 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 DDX11L8A8MPP1 907 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 NPHP1O15259 732 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 USP26Q9BXU7 913 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
ATG9A-203ENST00000409033 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
ATG9A-203ENST00000409033 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
ATG9A-203ENST00000409033 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
ATG9A-203ENST00000409033 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
ATG9A-203ENST00000409033 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
ATG9A-203ENST00000409033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
ATG9A-203ENST00000409033 PPFIA3O75145 1194 aa15.17■□□□□ 0.02
ATG9A-203ENST00000409033 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
ATG9A-203ENST00000409033 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
ATG9A-203ENST00000409033 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
ATG9A-203ENST00000409033 CYP27B1O15528 508 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 LINS1Q8NG48 757 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 SSH2Q76I76 1423 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
ATG9A-203ENST00000409033 STK3Q13188 491 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
ATG9A-203ENST00000409033 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 ACSBG1Q96GR2 724 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 CHMLP26374 656 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 SETD1AO15047 1707 aaKnown RBP15.15■□□□□ 0.02
ATG9A-203ENST00000409033 VPS37CA5D8V6 355 aaPredicted RBP15.15■□□□□ 0.02
ATG9A-203ENST00000409033 LMBR1LQ6UX01 489 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 RUFY2Q8WXA3 655 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 GDPD2Q9HCC8 539 aa15.15■□□□□ 0.02
ATG9A-203ENST00000409033 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
ATG9A-203ENST00000409033 CAVIN1Q6NZI2 390 aaKnown RBP15.14■□□□□ 0.01
ATG9A-203ENST00000409033 TRIM44Q96DX7 344 aaPredicted RBP15.14■□□□□ 0.01
ATG9A-203ENST00000409033 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms