RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 FCHSD1Q86WN1 690 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ERC1Q8IUD2 1116 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZGPATQ8N5A5 531 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 MSL3Q8N5Y2 521 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 TDRD7Q8NHU6 1098 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ERCC4Q92889 916 aaPredicted RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 TACO1Q9BSH4 297 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 RBM42Q9BTD8 480 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 UTP14AQ9BVJ6 771 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 TRIM5Q9C035 493 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 GBP3Q9H0R5 595 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 TTC12Q9H892 705 aaPredicted RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 BRMS1Q9HCU9 246 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ANO10Q9NW15 660 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 HMG20BQ9P0W2 317 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 RBM27Q9P2N5 1060 aaKnown RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 CLIP2Q9UDT6 1046 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZDHHC9Q9Y397 364 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 CYP46A1Q9Y6A2 500 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 TTC41PQ6P2S7 1318 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 RAD50Q92878 1312 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 IFT172Q9UG01 1749 aa3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 COL3A1P02461 1466 aaPredicted RBP3.35□□□□□ -1.87
SNORD88.1-201ENST00000408684 ADGRB1O14514 1584 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 HECW2Q9P2P5 1572 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZC3H13Q5T200 1668 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ANKRD26Q9UPS8 1709 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 TULP2O00295 520 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 FYB1O15117 783 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ERLIN1O75477 346 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 GLRX3O76003 335 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 HMGB1P09429 215 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CHGAP10645 457 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 U2AF2P26368 475 aaKnown RBP eCLIP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CHMLP26374 656 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CALRP27797 417 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 KCNJ4P48050 445 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZNF165P49910 485 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZNF75DP51815 510 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ATP8B2P98198 1209 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 NCBP1Q09161 790 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 SF3B2Q13435 895 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 STX1AQ16623 288 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CCDC30Q5VVM6 783 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 LARP1BQ659C4 914 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZSCAN25Q6NSZ9 544 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 PLA2G4DQ86XP0 818 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 SIRT2Q8IXJ6 389 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CEP57L1Q8IYX8 460 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZNF710Q8N1W2 664 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 UBXN4Q92575 508 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 RILPL2Q969X0 211 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 SIRT1Q96EB6 747 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 KIF1BPQ96EK5 621 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 CCDC34Q96HJ3 373 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 COG3Q96JB2 828 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 ZNF396Q96N95 335 aaPredicted RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 FUCA2Q9BTY2 467 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 RASSF4Q9H2L5 321 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 PRDM10Q9NQV6 1147 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 MBIPQ9NS73 344 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 FAM53CQ9NYF3 392 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 MKRN1Q9UHC7 482 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 HOOK1Q9UJC3 728 aaKnown RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 NAP1L2Q9ULW6 460 aaPredicted RBP3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 TNNQ9UQP3 1299 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 TTC21BQ7Z4L5 1316 aa3.34□□□□□ -1.87
SNORD88.1-201ENST00000408684 A0A1W2PP64 1363 aa3.34□□□□□ -1.88
SNORD88.1-201ENST00000408684 RPAP1Q9BWH6 1393 aaPredicted RBP3.34□□□□□ -1.88
SNORD88.1-201ENST00000408684 RIMS2Q9UQ26 1411 aa3.34□□□□□ -1.88
SNORD88.1-201ENST00000408684 EFCAB8A8MWE9 144 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CHL1O00533 1208 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 KINO60870 393 aaKnown RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 SLFN14P0C7P3 912 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 SYT1P21579 422 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CYP2C19P33261 490 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 IRX3P78415 501 aaPredicted RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 SETQ01105 290 aaPredicted RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 TYRO3Q06418 890 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 SNW1Q13573 536 aaKnown RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 ATP2B3Q16720 1220 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC158Q5M9N0 1113 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC73Q6ZRK6 1079 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 RBM43Q6ZSC3 357 aaKnown RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC186Q7Z3E2 898 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 LRRC8AQ8IWT6 810 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 GPR161Q8N6U8 529 aaKnown RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 MNS1Q8NEH6 495 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 GOLGA5Q8TBA6 731 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 DNAAF4Q8WXU2 420 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 EXOC4Q96A65 974 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 SPATA32Q96LK8 384 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 MPHOSPH8Q99549 860 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 BPIFA3Q9BQP9 254 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 LLPHQ9BRT6 129 aaKnown RBP3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 CLSTN2Q9H4D0 955 aa3.33□□□□□ -1.88
SNORD88.1-201ENST00000408684 DEF6Q9H4E7 631 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms