RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C1orf167Q5SNV9 1468 aa20.59■□□□□ 0.89
NUP50-203ENST00000407019 ADCY9O60503 1353 aa20.59■□□□□ 0.89
NUP50-203ENST00000407019 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
NUP50-203ENST00000407019 NUCB2P80303 420 aa20.59■□□□□ 0.89
NUP50-203ENST00000407019 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.89
NUP50-203ENST00000407019 SRGAP3O43295 1099 aa20.58■□□□□ 0.89
NUP50-203ENST00000407019 ANXA1P04083 346 aa20.58■□□□□ 0.89
NUP50-203ENST00000407019 MCCP23508 829 aa20.58■□□□□ 0.89
NUP50-203ENST00000407019 CWC22Q9HCG8 908 aaKnown RBP20.58■□□□□ 0.89
NUP50-203ENST00000407019 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.89
NUP50-203ENST00000407019 MST1RQ04912 1400 aa20.57■□□□□ 0.88
NUP50-203ENST00000407019 RHPN1Q8TCX5 695 aa20.57■□□□□ 0.88
NUP50-203ENST00000407019 KIF1BPQ96EK5 621 aa20.57■□□□□ 0.88
NUP50-203ENST00000407019 ARXQ96QS3 562 aa20.57■□□□□ 0.88
NUP50-203ENST00000407019 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
NUP50-203ENST00000407019 GIGYF1O75420 1035 aaPredicted RBP20.57■□□□□ 0.88
NUP50-203ENST00000407019 XRCC6P12956 609 aaKnown RBP eCLIP20.57■□□□□ 0.88
NUP50-203ENST00000407019 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
NUP50-203ENST00000407019 HEG1Q9ULI3 1381 aa20.56■□□□□ 0.88
NUP50-203ENST00000407019 NUTM1Q86Y26 1132 aa20.56■□□□□ 0.88
NUP50-203ENST00000407019 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
NUP50-203ENST00000407019 HSP90AB4PQ58FF6 505 aa20.55■□□□□ 0.88
NUP50-203ENST00000407019 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
NUP50-203ENST00000407019 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
NUP50-203ENST00000407019 CYP2E1P05181 493 aaPredicted RBP20.55■□□□□ 0.88
NUP50-203ENST00000407019 MRE11P49959 708 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 ANAPC15P60006 121 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 C19orf44Q9H6X5 657 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 ERBB3P21860 1342 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 ADAMTS7Q9UKP4 1686 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
NUP50-203ENST00000407019 ALDH1L1O75891 902 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 MAP3K2Q9Y2U5 619 aa20.54■□□□□ 0.88
NUP50-203ENST00000407019 MCM2P49736 904 aa20.53■□□□□ 0.88
NUP50-203ENST00000407019 NEK4P51957 841 aa20.53■□□□□ 0.88
NUP50-203ENST00000407019 ALS2Q96Q42 1657 aa20.53■□□□□ 0.88
NUP50-203ENST00000407019 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.88
NUP50-203ENST00000407019 MTX1Q13505 466 aa20.52■□□□□ 0.88
NUP50-203ENST00000407019 KSR2Q6VAB6 950 aa20.52■□□□□ 0.88
NUP50-203ENST00000407019 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
NUP50-203ENST00000407019 PROSER3Q2NL68 480 aa20.52■□□□□ 0.87
NUP50-203ENST00000407019 ZGPATQ8N5A5 531 aaKnown RBP20.52■□□□□ 0.87
NUP50-203ENST00000407019 HYPKQ9NX55 129 aa20.51■□□□□ 0.87
NUP50-203ENST00000407019 PALD1Q9ULE6 856 aa20.51■□□□□ 0.87
NUP50-203ENST00000407019 HDAC5Q9UQL6 1122 aa20.51■□□□□ 0.87
NUP50-203ENST00000407019 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
NUP50-203ENST00000407019 ZC3H6P61129 1189 aaKnown RBP20.5■□□□□ 0.87
NUP50-203ENST00000407019 FAM43AQ8N2R8 423 aa20.5■□□□□ 0.87
NUP50-203ENST00000407019 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
NUP50-203ENST00000407019 C9orf78Q9NZ63 289 aaPredicted RBP20.5■□□□□ 0.87
NUP50-203ENST00000407019 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
NUP50-203ENST00000407019 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
NUP50-203ENST00000407019 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
NUP50-203ENST00000407019 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
NUP50-203ENST00000407019 PKP1Q13835 747 aa20.49■□□□□ 0.87
NUP50-203ENST00000407019 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
NUP50-203ENST00000407019 TMX3Q96JJ7 454 aa20.49■□□□□ 0.87
NUP50-203ENST00000407019 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
NUP50-203ENST00000407019 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
NUP50-203ENST00000407019 DDX21Q9NR30 783 aaKnown RBP eCLIP20.48■□□□□ 0.87
NUP50-203ENST00000407019 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
NUP50-203ENST00000407019 MAP4K4O95819 1239 aaPredicted RBP20.47■□□□□ 0.87
NUP50-203ENST00000407019 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
NUP50-203ENST00000407019 MCTP1Q6DN14 999 aa20.47■□□□□ 0.87
NUP50-203ENST00000407019 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
NUP50-203ENST00000407019 ATF3P18847 181 aa20.47■□□□□ 0.87
NUP50-203ENST00000407019 DDX49Q9Y6V7 483 aaKnown RBP20.47■□□□□ 0.87
NUP50-203ENST00000407019 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
NUP50-203ENST00000407019 CWF19L2Q2TBE0 894 aaKnown RBP20.46■□□□□ 0.87
NUP50-203ENST00000407019 LINS1Q8NG48 757 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 IL25Q9H293 177 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 CRYBG1Q9Y4K1 1723 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 HSPA4P34932 840 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 CUL4AQ13619 759 aa20.46■□□□□ 0.87
NUP50-203ENST00000407019 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
NUP50-203ENST00000407019 KDM6AO15550 1401 aaPredicted RBP20.45■□□□□ 0.86
NUP50-203ENST00000407019 SGSM2O43147 1006 aa20.45■□□□□ 0.86
NUP50-203ENST00000407019 GLRX3O76003 335 aaKnown RBP20.45■□□□□ 0.86
NUP50-203ENST00000407019 TATP17735 454 aaPredicted RBP20.45■□□□□ 0.86
NUP50-203ENST00000407019 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
NUP50-203ENST00000407019 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
NUP50-203ENST00000407019 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
NUP50-203ENST00000407019 DCCP43146 1447 aa20.45■□□□□ 0.86
NUP50-203ENST00000407019 ZNF790Q6PG37 636 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 ABCC6O95255 1503 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 ZDHHC9Q9Y397 364 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
NUP50-203ENST00000407019 UTYO14607 1347 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 RAD50Q92878 1312 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 GRM8O00222 908 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 PHKG2P15735 406 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 PDIA6Q15084 440 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 GAS2L3Q86XJ1 694 aa20.43■□□□□ 0.86
NUP50-203ENST00000407019 AIMP1Q12904 312 aaKnown RBP20.42■□□□□ 0.86
NUP50-203ENST00000407019 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
NUP50-203ENST00000407019 GPATCH3Q96I76 525 aa20.42■□□□□ 0.86
NUP50-203ENST00000407019 LMBRD1Q9NUN5 540 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms