RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 DDX19BQ9UMR2 479 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 PHF8Q9UPP1 1060 aa7.03□□□□□ -1.28
HDAC9-203ENST00000406072 PDE3AQ14432 1141 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 NOLC1Q14978 699 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC9-203ENST00000406072 KRT222Q8N1A0 295 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 IL16Q14005 1332 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 DMTNQ08495 405 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 OS9Q13438 667 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-203ENST00000406072 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.29
HDAC9-203ENST00000406072 PLEKHF1Q96S99 279 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
HDAC9-203ENST00000406072 NOL10Q9BSC4 688 aaKnown RBP7.02□□□□□ -1.29
HDAC9-203ENST00000406072 FAM184AQ8NB25 1140 aa7.01□□□□□ -1.29
HDAC9-203ENST00000406072 ZFP91Q96JP5 570 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-203ENST00000406072 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
HDAC9-203ENST00000406072 TSC1Q92574 1164 aa7.01□□□□□ -1.29
HDAC9-203ENST00000406072 C16orf45Q96MC5 204 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-203ENST00000406072 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
HDAC9-203ENST00000406072 KCNH5Q8NCM2 988 aa7.01□□□□□ -1.29
HDAC9-203ENST00000406072 ZNF526Q8TF50 670 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-203ENST00000406072 RGPD5Q99666 1765 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 NPHP3Q7Z494 1330 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 VPS37CA5D8V6 355 aaPredicted RBP7□□□□□ -1.29
HDAC9-203ENST00000406072 RABEP1Q15276 862 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 BICD2Q8TD16 824 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 CWC22Q9HCG8 908 aaKnown RBP7□□□□□ -1.29
HDAC9-203ENST00000406072 POLKQ9UBT6 870 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 U2AF2P26368 475 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC9-203ENST00000406072 IL13P35225 146 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 USP8P40818 1118 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 NEK4P51957 841 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 PSME1Q06323 249 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 FBXW7Q969H0 707 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 NOL7Q9UMY1 257 aaKnown RBP7□□□□□ -1.29
HDAC9-203ENST00000406072 SCN11AQ9UI33 1791 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 UBR2Q8IWV8 1755 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 FIBPO43427 364 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 BAG4O95429 457 aaKnown RBP7□□□□□ -1.29
HDAC9-203ENST00000406072 UTP14CQ5TAP6 766 aaKnown RBP7□□□□□ -1.29
HDAC9-203ENST00000406072 RILPL2Q969X0 211 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 COG3Q96JB2 828 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 ACBD3Q9H3P7 528 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 RGPD2P0DJD1 1756 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 IGSF1Q8N6C5 1336 aa7□□□□□ -1.29
HDAC9-203ENST00000406072 CDC45O75419 566 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 HSP90B1P14625 803 aaKnown RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 LMOD3Q0VAK6 560 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 TMCO3Q6UWJ1 677 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 PROSER2Q86WR7 435 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 FEZ1Q99689 392 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 TTC12Q9H892 705 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 RBM27Q9P2N5 1060 aaKnown RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 SPATA31A3Q5VYP0 1347 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 ZSCAN23Q3MJ62 389 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 DHX37Q8IY37 1157 aaKnown RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 C10orf67Q8IYJ2 551 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 GIMAP7Q8NHV1 300 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 UBXN4Q92575 508 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 OGFRQ9NZT2 677 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 FCHSD2O94868 740 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 IBTKQ9P2D0 1353 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 IBSPP21815 317 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 PRIM1P49642 420 aaKnown RBP6.99□□□□□ -1.29
HDAC9-203ENST00000406072 TMX1Q9H3N1 280 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 ANO2Q9NQ90 1003 aa6.99□□□□□ -1.29
HDAC9-203ENST00000406072 LAMB4A4D0S4 1761 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 ELL2O00472 640 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-203ENST00000406072 SEC24BO95487 1268 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 CCDC192P0DO97 292 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 SMC3Q9UQE7 1217 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 CLGNO14967 610 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 ADCY5O95622 1261 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 HMGB1P09429 215 aaKnown RBP6.98□□□□□ -1.29
HDAC9-203ENST00000406072 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
HDAC9-203ENST00000406072 PTPN14Q15678 1187 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 TTLL5Q6EMB2 1281 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 WDR63Q8IWG1 891 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 CT47B1P0C2W7 299 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-203ENST00000406072 BMS1Q14692 1282 aaKnown RBP6.98□□□□□ -1.29
HDAC9-203ENST00000406072 FILIP1Q7Z7B0 1213 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 GLI3P10071 1580 aa6.98□□□□□ -1.29
HDAC9-203ENST00000406072 HMMRO75330 724 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 MYRIPQ8NFW9 859 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 RREB1Q92766 1687 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 MNAT1P51948 309 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 BABAM1Q9NWV8 329 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 SOS1Q07889 1333 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-203ENST00000406072 IGHDP01880 384 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 NME9Q86XW9 330 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 HDAC5Q9UQL6 1122 aa6.97□□□□□ -1.29
HDAC9-203ENST00000406072 THSD7AQ9UPZ6 1657 aa6.96□□□□□ -1.29
HDAC9-203ENST00000406072 CTR9Q6PD62 1173 aa6.96□□□□□ -1.29
HDAC9-203ENST00000406072 BRINP3Q76B58 766 aa6.96□□□□□ -1.29
HDAC9-203ENST00000406072 CREBRFQ8IUR6 639 aa6.96□□□□□ -1.29
HDAC9-203ENST00000406072 KIF18AQ8NI77 898 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms