RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 CANXP27824 592 aaKnown RBP34.81■■■■□ 3.16
HDAC11-206ENST00000405025 FKBP8Q14318 412 aa34.81■■■■□ 3.16
HDAC11-206ENST00000405025 STARD3NLO95772 234 aa34.8■■■■□ 3.16
HDAC11-206ENST00000405025 PELP1Q8IZL8 1130 aaKnown RBP34.8■■■■□ 3.16
HDAC11-206ENST00000405025 GPR162Q16538 588 aa34.79■■■■□ 3.16
HDAC11-206ENST00000405025 MIS18AQ9NYP9 233 aa34.79■■■■□ 3.16
HDAC11-206ENST00000405025 PRAMEF22A3QJZ6 481 aa34.78■■■■□ 3.16
HDAC11-206ENST00000405025 ZNF316A6NFI3 1004 aaPredicted RBP34.78■■■■□ 3.16
HDAC11-206ENST00000405025 TAF7Q15545 349 aaPredicted RBP34.78■■■■□ 3.16
HDAC11-206ENST00000405025 KDM3BQ7LBC6 1761 aa34.77■■■■□ 3.16
HDAC11-206ENST00000405025 KIF13BQ9NQT8 1826 aa34.77■■■■□ 3.16
HDAC11-206ENST00000405025 USPL1Q5W0Q7 1092 aa34.77■■■■□ 3.16
HDAC11-206ENST00000405025 CCDC146Q8IYE0 955 aa34.77■■■■□ 3.16
HDAC11-206ENST00000405025 TEX13AQ9BXU3 409 aaPredicted RBP34.77■■■■□ 3.16
HDAC11-206ENST00000405025 ZPR1O75312 459 aa34.74■■■■□ 3.15
HDAC11-206ENST00000405025 A1BGP04217 495 aa34.74■■■■□ 3.15
HDAC11-206ENST00000405025 YBX3P16989 372 aaKnown RBP eCLIP34.74■■■■□ 3.15
HDAC11-206ENST00000405025 YY1P25490 414 aa34.74■■■■□ 3.15
HDAC11-206ENST00000405025 EIF5P55010 431 aaKnown RBP34.74■■■■□ 3.15
HDAC11-206ENST00000405025 WDR43Q15061 677 aaKnown RBP eCLIP34.74■■■■□ 3.15
HDAC11-206ENST00000405025 KIAA1551Q9HCM1 1747 aa34.74■■■■□ 3.15
HDAC11-206ENST00000405025 C10orf71Q711Q0 1435 aa34.73■■■■□ 3.15
HDAC11-206ENST00000405025 DDR1Q08345 913 aa34.73■■■■□ 3.15
HDAC11-206ENST00000405025 NARFQ9UHQ1 456 aa34.73■■■■□ 3.15
HDAC11-206ENST00000405025 USP16Q9Y5T5 823 aa34.73■■■■□ 3.15
HDAC11-206ENST00000405025 PARP3Q9Y6F1 533 aa34.72■■■■□ 3.15
HDAC11-206ENST00000405025 UTRNP46939 3433 aa34.72■■■■□ 3.15
HDAC11-206ENST00000405025 TMPOP42166 694 aaKnown RBP34.71■■■■□ 3.15
HDAC11-206ENST00000405025 RIPK4P57078 832 aa34.71■■■■□ 3.15
HDAC11-206ENST00000405025 BCL2L12Q9HB09 334 aa34.71■■■■□ 3.15
HDAC11-206ENST00000405025 ADAMTS8Q9UP79 889 aa34.71■■■■□ 3.15
HDAC11-206ENST00000405025 RRP7AQ9Y3A4 280 aaKnown RBP34.7■■■■□ 3.15
HDAC11-206ENST00000405025 SNRPA1P09661 255 aaKnown RBP34.69■■■■□ 3.14
HDAC11-206ENST00000405025 WWC3Q9ULE0 1092 aa34.69■■■■□ 3.14
HDAC11-206ENST00000405025 ZNF330Q9Y3S2 320 aaPredicted RBP34.69■■■■□ 3.14
HDAC11-206ENST00000405025 PXDNLA1KZ92 1463 aa34.68■■■■□ 3.14
HDAC11-206ENST00000405025 TM4SF1P30408 202 aa34.68■■■■□ 3.14
HDAC11-206ENST00000405025 PIP4K2AP48426 406 aaPredicted RBP34.68■■■■□ 3.14
HDAC11-206ENST00000405025 SCN7AQ01118 1682 aa34.68■■■■□ 3.14
HDAC11-206ENST00000405025 GOLGB1Q14789 3259 aaKnown RBP34.68■■■■□ 3.14
HDAC11-206ENST00000405025 CHD4Q14839 1912 aa34.68■■■■□ 3.14
HDAC11-206ENST00000405025 N4BP2Q86UW6 1770 aaPredicted RBP34.68■■■■□ 3.14
HDAC11-206ENST00000405025 LAMB4A4D0S4 1761 aa34.67■■■■□ 3.14
HDAC11-206ENST00000405025 IL6STP40189 918 aaPredicted RBP34.66■■■■□ 3.14
HDAC11-206ENST00000405025 PNISRQ8TF01 805 aaKnown RBP34.66■■■■□ 3.14
HDAC11-206ENST00000405025 RUNDC1Q96C34 613 aa34.66■■■■□ 3.14
HDAC11-206ENST00000405025 POLRMTO00411 1230 aaKnown RBP34.65■■■■□ 3.14
HDAC11-206ENST00000405025 A0A087WZG4 1122 aa34.64■■■■□ 3.14
HDAC11-206ENST00000405025 NFIXQ14938 502 aa34.64■■■■□ 3.14
HDAC11-206ENST00000405025 NEUROD2Q15784 382 aa34.63■■■■□ 3.13
HDAC11-206ENST00000405025 TBC1D2BQ9UPU7 963 aa34.63■■■■□ 3.13
HDAC11-206ENST00000405025 AFDNP55196 1824 aaKnown RBP34.62■■■■□ 3.13
HDAC11-206ENST00000405025 CCDC184Q52MB2 194 aa34.62■■■■□ 3.13
HDAC11-206ENST00000405025 EIF4A1P60842 406 aaKnown RBP34.61■■■■□ 3.13
HDAC11-206ENST00000405025 BCORQ6W2J9 1755 aa34.6■■■■□ 3.13
HDAC11-206ENST00000405025 NRXN2Q9P2S2 1712 aa34.59■■■■□ 3.13
HDAC11-206ENST00000405025 A0A0G2JLW4 131 aa34.59■■■■□ 3.13
HDAC11-206ENST00000405025 NBPF26B4DH59 902 aa34.59■■■■□ 3.13
HDAC11-206ENST00000405025 LMOD3Q0VAK6 560 aa34.59■■■■□ 3.13
HDAC11-206ENST00000405025 NBPF10Q6P3W6 841 aaKnown RBP34.59■■■■□ 3.13
HDAC11-206ENST00000405025 NBPF15Q8N660 670 aa34.59■■■■□ 3.13
HDAC11-206ENST00000405025 TGFB2P61812 414 aa34.58■■■■□ 3.13
HDAC11-206ENST00000405025 TRIM35Q9UPQ4 493 aa34.58■■■■□ 3.13
HDAC11-206ENST00000405025 GRIN3BO60391 1043 aa34.57■■■■□ 3.12
HDAC11-206ENST00000405025 GIGYF1O75420 1035 aaPredicted RBP34.57■■■■□ 3.12
HDAC11-206ENST00000405025 DPEP1P16444 411 aa34.57■■■■□ 3.12
HDAC11-206ENST00000405025 CAMTA2O94983 1202 aa34.56■■■■□ 3.12
HDAC11-206ENST00000405025 BICDL1Q6ZP65 573 aa34.56■■■■□ 3.12
HDAC11-206ENST00000405025 TSPYL4Q9UJ04 414 aa34.56■■■■□ 3.12
HDAC11-206ENST00000405025 BRCA1P38398 1863 aaKnown RBP34.56■■■■□ 3.12
HDAC11-206ENST00000405025 TBC1D9BQ66K14 1250 aa34.55■■■■□ 3.12
HDAC11-206ENST00000405025 DZIP3Q86Y13 1208 aaKnown RBP34.54■■■■□ 3.12
HDAC11-206ENST00000405025 NPM2Q86SE8 214 aaKnown RBP34.53■■■■□ 3.12
HDAC11-206ENST00000405025 SERPINB2P05120 415 aa34.52■■■■□ 3.12
HDAC11-206ENST00000405025 KCNA3P22001 575 aa34.5■■■■□ 3.11
HDAC11-206ENST00000405025 CARMIL3Q8ND23 1372 aa34.49■■■■□ 3.11
HDAC11-206ENST00000405025 CHRNA5P30532 468 aa34.48■■■■□ 3.11
HDAC11-206ENST00000405025 APAF1O14727 1248 aa34.47■■■■□ 3.11
HDAC11-206ENST00000405025 BABAM1Q9NWV8 329 aa34.47■■■■□ 3.11
HDAC11-206ENST00000405025 ANP32CO43423 234 aa34.46■■■■□ 3.11
HDAC11-206ENST00000405025 BCS1LQ9Y276 419 aa34.46■■■■□ 3.11
HDAC11-206ENST00000405025 ZNF784Q8NCA9 323 aaPredicted RBP34.44■■■■□ 3.1
HDAC11-206ENST00000405025 LAS1LQ9Y4W2 734 aaKnown RBP34.44■■■■□ 3.1
HDAC11-206ENST00000405025 ANKRD31Q8N7Z5 1873 aa34.44■■■■□ 3.1
HDAC11-206ENST00000405025 CHL1O00533 1208 aa34.43■■■■□ 3.1
HDAC11-206ENST00000405025 NGEFQ8N5V2 710 aa34.42■■■■□ 3.1
HDAC11-206ENST00000405025 KRT24Q2M2I5 525 aa34.41■■■■□ 3.1
HDAC11-206ENST00000405025 CCDC24Q8N4L8 307 aa34.41■■■■□ 3.1
HDAC11-206ENST00000405025 DLEC1Q9Y238 1755 aa34.41■■■■□ 3.1
HDAC11-206ENST00000405025 ARFGEF1Q9Y6D6 1849 aa34.4■■■■□ 3.1
HDAC11-206ENST00000405025 MYL6BP14649 208 aa34.4■■■■□ 3.1
HDAC11-206ENST00000405025 SETDB2Q96T68 719 aa34.4■■■■□ 3.1
HDAC11-206ENST00000405025 PRR5LQ6MZQ0 368 aa34.39■■■■□ 3.1
HDAC11-206ENST00000405025 MRS2Q9HD23 443 aa34.39■■■■□ 3.1
HDAC11-206ENST00000405025 PIM2Q9P1W9 311 aa34.39■■■■□ 3.1
HDAC11-206ENST00000405025 EIF2S2P20042 333 aaKnown RBP34.38■■■■□ 3.09
HDAC11-206ENST00000405025 HLFQ16534 295 aa34.38■■■■□ 3.09
HDAC11-206ENST00000405025 CLEC4GQ6UXB4 293 aa34.38■■■■□ 3.09
HDAC11-206ENST00000405025 TTLL7Q6ZT98 887 aa34.37■■■■□ 3.09
HDAC11-206ENST00000405025 ZNF652Q9Y2D9 606 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms