RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 BTBD11A6QL63 1104 aa23.59■■□□□ 1.37
THUMPD2-202ENST00000403537 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
THUMPD2-202ENST00000403537 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
THUMPD2-202ENST00000403537 HEG1Q9ULI3 1381 aa23.58■■□□□ 1.37
THUMPD2-202ENST00000403537 ZPR1O75312 459 aa23.58■■□□□ 1.37
THUMPD2-202ENST00000403537 PARP3Q9Y6F1 533 aa23.58■■□□□ 1.37
THUMPD2-202ENST00000403537 ZNF496Q96IT1 587 aaPredicted RBP23.57■■□□□ 1.36
THUMPD2-202ENST00000403537 RRP7AQ9Y3A4 280 aaKnown RBP23.57■■□□□ 1.36
THUMPD2-202ENST00000403537 MYH14Q7Z406 1995 aaKnown RBP23.57■■□□□ 1.36
THUMPD2-202ENST00000403537 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
THUMPD2-202ENST00000403537 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
THUMPD2-202ENST00000403537 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
THUMPD2-202ENST00000403537 A0A087WZG4 1122 aa23.55■■□□□ 1.36
THUMPD2-202ENST00000403537 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
THUMPD2-202ENST00000403537 UBR2Q8IWV8 1755 aa23.55■■□□□ 1.36
THUMPD2-202ENST00000403537 TGFB2P61812 414 aa23.54■■□□□ 1.36
THUMPD2-202ENST00000403537 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
THUMPD2-202ENST00000403537 MCM10Q7L590 875 aa23.54■■□□□ 1.36
THUMPD2-202ENST00000403537 ZBTB1Q9Y2K1 713 aa23.54■■□□□ 1.36
THUMPD2-202ENST00000403537 COL15A1P39059 1388 aa23.53■■□□□ 1.36
THUMPD2-202ENST00000403537 SIPA1L3O60292 1781 aaPredicted RBP23.53■■□□□ 1.36
THUMPD2-202ENST00000403537 NPM2Q86SE8 214 aaKnown RBP23.53■■□□□ 1.36
THUMPD2-202ENST00000403537 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
THUMPD2-202ENST00000403537 NARFQ9UHQ1 456 aa23.53■■□□□ 1.36
THUMPD2-202ENST00000403537 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
THUMPD2-202ENST00000403537 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
THUMPD2-202ENST00000403537 CANXP27824 592 aaKnown RBP23.51■■□□□ 1.35
THUMPD2-202ENST00000403537 FKBP8Q14318 412 aa23.51■■□□□ 1.35
THUMPD2-202ENST00000403537 C4AP0C0L4 1744 aa23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 APAF1O14727 1248 aa23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 USPL1Q5W0Q7 1092 aa23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 C10orf71Q711Q0 1435 aa23.5■■□□□ 1.35
THUMPD2-202ENST00000403537 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
THUMPD2-202ENST00000403537 YBX3P16989 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
THUMPD2-202ENST00000403537 IL6STP40189 918 aaPredicted RBP23.49■■□□□ 1.35
THUMPD2-202ENST00000403537 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
THUMPD2-202ENST00000403537 RIPK4P57078 832 aa23.48■■□□□ 1.35
THUMPD2-202ENST00000403537 TM4SF1P30408 202 aa23.47■■□□□ 1.35
THUMPD2-202ENST00000403537 LMOD3Q0VAK6 560 aa23.46■■□□□ 1.35
THUMPD2-202ENST00000403537 CHD4Q14839 1912 aa23.45■■□□□ 1.35
THUMPD2-202ENST00000403537 KCNQ3O43525 872 aa23.45■■□□□ 1.34
THUMPD2-202ENST00000403537 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
THUMPD2-202ENST00000403537 POLRMTO00411 1230 aaKnown RBP23.44■■□□□ 1.34
THUMPD2-202ENST00000403537 DDR1Q08345 913 aa23.44■■□□□ 1.34
THUMPD2-202ENST00000403537 PXDNLA1KZ92 1463 aa23.43■■□□□ 1.34
THUMPD2-202ENST00000403537 KIF13BQ9NQT8 1826 aa23.43■■□□□ 1.34
THUMPD2-202ENST00000403537 ZNF784Q8NCA9 323 aaPredicted RBP23.42■■□□□ 1.34
THUMPD2-202ENST00000403537 A1BGP04217 495 aa23.41■■□□□ 1.34
THUMPD2-202ENST00000403537 NFIXQ14938 502 aa23.41■■□□□ 1.34
THUMPD2-202ENST00000403537 ZNF330Q9Y3S2 320 aaPredicted RBP23.41■■□□□ 1.34
THUMPD2-202ENST00000403537 USP16Q9Y5T5 823 aa23.41■■□□□ 1.34
THUMPD2-202ENST00000403537 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
THUMPD2-202ENST00000403537 BCL2L12Q9HB09 334 aa23.4■■□□□ 1.34
THUMPD2-202ENST00000403537 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
THUMPD2-202ENST00000403537 DPEP1P16444 411 aa23.39■■□□□ 1.33
THUMPD2-202ENST00000403537 KDM3BQ7LBC6 1761 aa23.38■■□□□ 1.33
THUMPD2-202ENST00000403537 RGL2O15211 777 aa23.38■■□□□ 1.33
THUMPD2-202ENST00000403537 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
THUMPD2-202ENST00000403537 SALL2Q9Y467 1007 aaPredicted RBP23.38■■□□□ 1.33
THUMPD2-202ENST00000403537 UTRNP46939 3433 aa23.38■■□□□ 1.33
THUMPD2-202ENST00000403537 SERPINB2P05120 415 aa23.37■■□□□ 1.33
THUMPD2-202ENST00000403537 DZIP3Q86Y13 1208 aaKnown RBP23.37■■□□□ 1.33
THUMPD2-202ENST00000403537 MIS18AQ9NYP9 233 aa23.37■■□□□ 1.33
THUMPD2-202ENST00000403537 TBC1D2BQ9UPU7 963 aa23.37■■□□□ 1.33
THUMPD2-202ENST00000403537 ZNF652Q9Y2D9 606 aa23.37■■□□□ 1.33
THUMPD2-202ENST00000403537 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
THUMPD2-202ENST00000403537 BCS1LQ9Y276 419 aa23.36■■□□□ 1.33
THUMPD2-202ENST00000403537 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
THUMPD2-202ENST00000403537 PDZRN3Q9UPQ7 1066 aa23.35■■□□□ 1.33
THUMPD2-202ENST00000403537 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
THUMPD2-202ENST00000403537 DALRD3Q5D0E6 543 aaKnown RBP23.34■■□□□ 1.33
THUMPD2-202ENST00000403537 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
THUMPD2-202ENST00000403537 WWC3Q9ULE0 1092 aa23.34■■□□□ 1.33
THUMPD2-202ENST00000403537 CARMIL3Q8ND23 1372 aa23.34■■□□□ 1.33
THUMPD2-202ENST00000403537 PRAMEF22A3QJZ6 481 aa23.33■■□□□ 1.33
THUMPD2-202ENST00000403537 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.33
THUMPD2-202ENST00000403537 BICDL1Q6ZP65 573 aa23.33■■□□□ 1.33
THUMPD2-202ENST00000403537 TSPYL4Q9UJ04 414 aa23.33■■□□□ 1.33
THUMPD2-202ENST00000403537 KCNA3P22001 575 aa23.32■■□□□ 1.32
THUMPD2-202ENST00000403537 TBC1D9BQ66K14 1250 aa23.32■■□□□ 1.32
THUMPD2-202ENST00000403537 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
THUMPD2-202ENST00000403537 KIAA1551Q9HCM1 1747 aa23.31■■□□□ 1.32
THUMPD2-202ENST00000403537 SCN7AQ01118 1682 aa23.31■■□□□ 1.32
THUMPD2-202ENST00000403537 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
THUMPD2-202ENST00000403537 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
THUMPD2-202ENST00000403537 NBPF26B4DH59 902 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 NPHP1O15259 732 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 PDE6BP35913 854 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 NBPF10Q6P3W6 841 aaKnown RBP23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 NBPF15Q8N660 670 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 BRIP1Q9BX63 1249 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 NRXN2Q9P2S2 1712 aa23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 N4BP2Q86UW6 1770 aaPredicted RBP23.29■■□□□ 1.32
THUMPD2-202ENST00000403537 H0YIN7 160 aa23.28■■□□□ 1.32
THUMPD2-202ENST00000403537 CHRNA5P30532 468 aa23.28■■□□□ 1.32
THUMPD2-202ENST00000403537 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
THUMPD2-202ENST00000403537 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
THUMPD2-202ENST00000403537 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms