RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CHD4Q14839 1912 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 TM4SF1P30408 202 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 EIF5P55010 431 aaKnown RBP21.06■□□□□ 0.96
ATG4B-203ENST00000400772 DDR1Q08345 913 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 TEX13AQ9BXU3 409 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-203ENST00000400772 NARFQ9UHQ1 456 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 PARP3Q9Y6F1 533 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 COL15A1P39059 1388 aa21.06■□□□□ 0.96
ATG4B-203ENST00000400772 MYBBP1AQ9BQG0 1328 aaKnown RBP21.05■□□□□ 0.96
ATG4B-203ENST00000400772 GRIN3BO60391 1043 aa21.05■□□□□ 0.96
ATG4B-203ENST00000400772 ZPR1O75312 459 aa21.05■□□□□ 0.96
ATG4B-203ENST00000400772 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
ATG4B-203ENST00000400772 C10orf71Q711Q0 1435 aa21.04■□□□□ 0.96
ATG4B-203ENST00000400772 KIF13BQ9NQT8 1826 aa21.04■□□□□ 0.96
ATG4B-203ENST00000400772 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
ATG4B-203ENST00000400772 WWC3Q9ULE0 1092 aa21.04■□□□□ 0.96
ATG4B-203ENST00000400772 USP16Q9Y5T5 823 aa21.04■□□□□ 0.96
ATG4B-203ENST00000400772 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
ATG4B-203ENST00000400772 POLRMTO00411 1230 aaKnown RBP21.03■□□□□ 0.96
ATG4B-203ENST00000400772 A1BGP04217 495 aa21.03■□□□□ 0.96
ATG4B-203ENST00000400772 NEFMP07197 916 aa21.03■□□□□ 0.96
ATG4B-203ENST00000400772 TGFB2P61812 414 aa21.03■□□□□ 0.96
ATG4B-203ENST00000400772 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-203ENST00000400772 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
ATG4B-203ENST00000400772 PXDNLA1KZ92 1463 aa21.02■□□□□ 0.96
ATG4B-203ENST00000400772 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-203ENST00000400772 MIS18AQ9NYP9 233 aa21.02■□□□□ 0.96
ATG4B-203ENST00000400772 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.95
ATG4B-203ENST00000400772 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
ATG4B-203ENST00000400772 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
ATG4B-203ENST00000400772 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-203ENST00000400772 IL6STP40189 918 aaPredicted RBP21■□□□□ 0.95
ATG4B-203ENST00000400772 NFIXQ14938 502 aa21■□□□□ 0.95
ATG4B-203ENST00000400772 THUMPD2Q9BTF0 503 aaKnown RBP21■□□□□ 0.95
ATG4B-203ENST00000400772 PRKRIP1Q9H875 184 aaPredicted RBP21■□□□□ 0.95
ATG4B-203ENST00000400772 A0A087WZG4 1122 aa20.99■□□□□ 0.95
ATG4B-203ENST00000400772 SNRPA1P09661 255 aaKnown RBP20.99■□□□□ 0.95
ATG4B-203ENST00000400772 DPEP1P16444 411 aa20.99■□□□□ 0.95
ATG4B-203ENST00000400772 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
ATG4B-203ENST00000400772 N4BP2Q86UW6 1770 aaPredicted RBP20.98■□□□□ 0.95
ATG4B-203ENST00000400772 KCNA3P22001 575 aa20.98■□□□□ 0.95
ATG4B-203ENST00000400772 TBC1D2BQ9UPU7 963 aa20.97■□□□□ 0.95
ATG4B-203ENST00000400772 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-203ENST00000400772 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
ATG4B-203ENST00000400772 ZNF330Q9Y3S2 320 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-203ENST00000400772 RIPK4P57078 832 aa20.95■□□□□ 0.94
ATG4B-203ENST00000400772 SERPINB2P05120 415 aa20.94■□□□□ 0.94
ATG4B-203ENST00000400772 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
ATG4B-203ENST00000400772 TBC1D9BQ66K14 1250 aa20.94■□□□□ 0.94
ATG4B-203ENST00000400772 NBPF26B4DH59 902 aa20.93■□□□□ 0.94
ATG4B-203ENST00000400772 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
ATG4B-203ENST00000400772 EIF4A1P60842 406 aaKnown RBP20.93■□□□□ 0.94
ATG4B-203ENST00000400772 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
ATG4B-203ENST00000400772 CCDC146Q8IYE0 955 aa20.93■□□□□ 0.94
ATG4B-203ENST00000400772 NBPF15Q8N660 670 aa20.93■□□□□ 0.94
ATG4B-203ENST00000400772 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
ATG4B-203ENST00000400772 CHRNA5P30532 468 aa20.92■□□□□ 0.94
ATG4B-203ENST00000400772 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
ATG4B-203ENST00000400772 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
ATG4B-203ENST00000400772 NRXN2Q9P2S2 1712 aa20.92■□□□□ 0.94
ATG4B-203ENST00000400772 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
ATG4B-203ENST00000400772 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
ATG4B-203ENST00000400772 KDM3BQ7LBC6 1761 aa20.91■□□□□ 0.94
ATG4B-203ENST00000400772 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
ATG4B-203ENST00000400772 BRCA1P38398 1863 aaKnown RBP20.9■□□□□ 0.94
ATG4B-203ENST00000400772 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
ATG4B-203ENST00000400772 PIM2Q9P1W9 311 aa20.9■□□□□ 0.94
ATG4B-203ENST00000400772 WDR43Q15061 677 aaKnown RBP eCLIP20.89■□□□□ 0.93
ATG4B-203ENST00000400772 RUNDC1Q96C34 613 aa20.89■□□□□ 0.93
ATG4B-203ENST00000400772 SCN7AQ01118 1682 aa20.89■□□□□ 0.93
ATG4B-203ENST00000400772 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
ATG4B-203ENST00000400772 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
ATG4B-203ENST00000400772 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
ATG4B-203ENST00000400772 TRIM35Q9UPQ4 493 aa20.87■□□□□ 0.93
ATG4B-203ENST00000400772 LMOD3Q0VAK6 560 aa20.86■□□□□ 0.93
ATG4B-203ENST00000400772 DALRD3Q5D0E6 543 aaKnown RBP20.86■□□□□ 0.93
ATG4B-203ENST00000400772 TSPYL4Q9UJ04 414 aa20.86■□□□□ 0.93
ATG4B-203ENST00000400772 ADCY9O60503 1353 aa20.85■□□□□ 0.93
ATG4B-203ENST00000400772 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
ATG4B-203ENST00000400772 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
ATG4B-203ENST00000400772 BABAM1Q9NWV8 329 aa20.85■□□□□ 0.93
ATG4B-203ENST00000400772 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
ATG4B-203ENST00000400772 PRR5LQ6MZQ0 368 aa20.84■□□□□ 0.93
ATG4B-203ENST00000400772 ARHGAP27Q6ZUM4 889 aa20.84■□□□□ 0.93
ATG4B-203ENST00000400772 CCDC24Q8N4L8 307 aa20.84■□□□□ 0.93
ATG4B-203ENST00000400772 BCORQ6W2J9 1755 aa20.84■□□□□ 0.93
ATG4B-203ENST00000400772 LAMB4A4D0S4 1761 aa20.83■□□□□ 0.93
ATG4B-203ENST00000400772 ATP10DQ9P241 1426 aa20.83■□□□□ 0.93
ATG4B-203ENST00000400772 HLFQ16534 295 aa20.82■□□□□ 0.92
ATG4B-203ENST00000400772 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
ATG4B-203ENST00000400772 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
ATG4B-203ENST00000400772 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
ATG4B-203ENST00000400772 CHL1O00533 1208 aa20.81■□□□□ 0.92
ATG4B-203ENST00000400772 RGL2O15211 777 aa20.81■□□□□ 0.92
ATG4B-203ENST00000400772 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
ATG4B-203ENST00000400772 BRIP1Q9BX63 1249 aa20.81■□□□□ 0.92
ATG4B-203ENST00000400772 ZNF652Q9Y2D9 606 aa20.8■□□□□ 0.92
ATG4B-203ENST00000400772 ANKRD31Q8N7Z5 1873 aa20.79■□□□□ 0.92
ATG4B-203ENST00000400772 H0YIN7 160 aa20.79■□□□□ 0.92
ATG4B-203ENST00000400772 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms