RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 NACAP1Q9BZK3 213 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 PLEKHH1Q9ULM0 1364 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 ADCY5O95622 1261 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 DYDC1Q8WWB3 177 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 NOL7Q9UMY1 257 aaKnown RBP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 A2MP01023 1474 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 IBSPP21815 317 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 ARHGAP29Q52LW3 1261 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 AACSQ86V21 672 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 GBP3Q9H0R5 595 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 ZNF830Q96NB3 372 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 KLHL40Q2TBA0 621 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
PTPRM-202ENST00000400053 RNF123Q5XPI4 1314 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 HDAC1Q13547 482 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-202ENST00000400053 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 GCC2Q8IWJ2 1684 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 KIF2AO00139 706 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-202ENST00000400053 NEBLO76041 1014 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 CCDC57Q2TAC2 916 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 JAKMIP3Q5VZ66 844 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
PTPRM-202ENST00000400053 STAMBPO95630 424 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 MCM5P33992 734 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 BMP2KLQ5H9B9 411 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 PRPF40BQ6NWY9 871 aaKnown RBP10.34□□□□□ -0.75
PTPRM-202ENST00000400053 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 ARHGAP45Q92619 1136 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 SMTNL1A8MU46 457 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 EPB41L2O43491 1005 aaKnown RBP10.34□□□□□ -0.75
PTPRM-202ENST00000400053 HCLS1P14317 486 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-202ENST00000400053 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 TAF4BQ92750 862 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
PTPRM-202ENST00000400053 INSRP06213 1382 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 CDKL5O76039 1030 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 MX1P20591 662 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 ZSCAN25Q6NSZ9 544 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 TAX1BP1Q86VP1 789 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
PTPRM-202ENST00000400053 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 TATP17735 454 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-202ENST00000400053 ZSCAN23Q3MJ62 389 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-202ENST00000400053 CRACR2AQ9BSW2 395 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
PTPRM-202ENST00000400053 MIS18AQ9NYP9 233 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 ZNF518AQ6AHZ1 1483 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 FEZ1Q99689 392 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 WDR7Q9Y4E6 1490 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
PTPRM-202ENST00000400053 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 ANKLE2Q86XL3 938 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 PTPRCP08575 1304 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 TMX1Q9H3N1 280 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 ANO10Q9NW15 660 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 KIF4BQ2VIQ3 1234 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 NUP133Q8WUM0 1156 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 KIF6Q6ZMV9 814 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
PTPRM-202ENST00000400053 IGSF3O75054 1194 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 GUCY1B3Q02153 619 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 PPM1EQ8WY54 764 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 CCDC97Q96F63 343 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 GOLGA6L10A0A0M3HER8 536 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 TTC21BQ7Z4L5 1316 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 BTBD11A6QL63 1104 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 PPP1R12BO60237 982 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 KRT32Q14532 448 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 KCNH5Q8NCM2 988 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 ABCC10Q5T3U5 1492 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 ZSCAN12O43309 604 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
PTPRM-202ENST00000400053 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
PTPRM-202ENST00000400053 ZNF165P49910 485 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 TTC39AQ5SRH9 613 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTPRM-202ENST00000400053 MCM3P25205 808 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 NOLC1Q14978 699 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTPRM-202ENST00000400053 KLHL10Q6JEL2 608 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 GIMAP6Q6P9H5 292 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
PTPRM-202ENST00000400053 WASF1Q92558 559 aa10.3□□□□□ -0.76
PTPRM-202ENST00000400053 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms